Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,919,891 |
G→A |
R64C (CGT→TGT) |
atpI ← |
membrane‑bound ATP synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,919,891 | 0 | G | A | 100.0%
| 866.7
/ NA
| 243 | R64C (CGT→TGT) | atpI | membrane‑bound ATP synthase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (120/123); total (120/123) |
Only 100 of 247 total aligned reads displayed.
GTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGC > NC_000913/3919801‑3919980
|
gTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACAcc < 1:1109925/93‑1 (MQ=255)
gTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACAcc > 1:849558/1‑93 (MQ=255)
tAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCa < 2:4937791/93‑1 (MQ=255)
caaCACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCa < 1:2473506/92‑1 (MQ=255)
aaCACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAg < 1:3479644/93‑1 (MQ=255)
aaCACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAg < 2:2105783/93‑1 (MQ=255)
aaCACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAg > 1:4468445/1‑93 (MQ=255)
aaCACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAg > 1:6059622/1‑93 (MQ=255)
cacCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGc < 1:3751447/93‑1 (MQ=255)
acCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCa > 1:5097719/1‑93 (MQ=255)
ccAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGcca > 1:821120/1‑91 (MQ=255)
ccAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCaa > 1:4802579/1‑93 (MQ=255)
ccAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCaa > 2:1412117/1‑93 (MQ=255)
cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGATACCAGGCaaa > 2:1251063/1‑93 (MQ=255)
cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCaaa > 2:5290233/1‑93 (MQ=255)
aCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAata > 2:5690535/1‑93 (MQ=255)
cATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAatat > 2:3957845/1‑93 (MQ=255)
tCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCa < 2:4605080/93‑1 (MQ=255)
gCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATa < 1:2656400/93‑1 (MQ=255)
ccAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATaa < 1:1753807/93‑1 (MQ=255)
ccAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATaa < 1:2284328/93‑1 (MQ=255)
ccAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATaa > 1:2197938/1‑93 (MQ=255)
ataaCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAAc > 2:313947/3‑93 (MQ=255)
aGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAAc < 2:4442916/93‑1 (MQ=255)
aGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAAc < 2:5961739/93‑1 (MQ=255)
gAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACa > 1:4031320/1‑93 (MQ=255)
gAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACa < 1:3618136/93‑1 (MQ=255)
gAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACa > 1:3170567/1‑93 (MQ=255)
gAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACa > 2:679224/1‑93 (MQ=255)
cTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACaaaa < 2:6390525/93‑1 (MQ=255)
ttGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACg < 1:2795594/93‑1 (MQ=255)
tGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCGGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGt < 1:263135/93‑1 (MQ=255)
gAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGtt > 1:5549488/1‑93 (MQ=255)
gAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGtt > 1:4161994/1‑93 (MQ=255)
gAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGtt > 2:613031/1‑93 (MQ=255)
aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTa < 2:5876693/93‑1 (MQ=255)
aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTa < 1:3335314/93‑1 (MQ=255)
aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTGCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTa < 1:4066313/93‑1 (MQ=255)
aGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAgg < 2:129440/93‑1 (MQ=255)
gCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGc > 2:6205783/1‑93 (MQ=255)
gCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGc < 1:1351392/93‑1 (MQ=255)
cTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCa > 1:3574148/1‑93 (MQ=255)
ttCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAACCAAAACGTTAGGCAg < 2:261365/93‑1 (MQ=255)
ttCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAg > 1:3709171/1‑93 (MQ=255)
gCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGaaa < 1:4700193/93‑1 (MQ=255)
ccAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAg < 1:2041453/93‑1 (MQ=255)
aaaTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAc > 1:732029/1‑93 (MQ=255)
aaaTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAc > 1:1663052/1‑93 (MQ=255)
aaaTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAc > 2:2995322/1‑93 (MQ=255)
aaaTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAc < 2:2944562/93‑1 (MQ=255)
aTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTg < 2:118990/93‑1 (MQ=255)
aTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTg > 2:870355/1‑93 (MQ=255)
tGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGc > 1:6103902/1‑93 (MQ=255)
gCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGcc < 2:2245975/93‑1 (MQ=255)
gAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAg < 2:266071/93‑1 (MQ=255)
gAATGCCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAg < 2:5805361/93‑1 (MQ=255)
aaTGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAgg > 2:5021883/1‑93 (MQ=255)
aTGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGc < 1:3956672/93‑1 (MQ=255)
aTGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGc > 1:1791671/1‑93 (MQ=255)
tGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGcc > 2:5572218/1‑93 (MQ=255)
gTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGccc < 2:2412244/93‑1 (MQ=255)
gTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGccc < 1:6330802/93‑1 (MQ=255)
gTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGccc > 2:780988/1‑93 (MQ=255)
ccAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGccccc > 2:4847577/1‑93 (MQ=255)
ccAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGccccc < 2:4766286/93‑1 (MQ=255)
ggCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCt < 2:1909347/93‑1 (MQ=255)
ggCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCt > 2:2787493/1‑93 (MQ=255)
ggCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCt > 1:3865811/1‑93 (MQ=255)
ccACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTa > 1:120273/1‑93 (MQ=255)
aCCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAtt > 1:5640932/1‑93 (MQ=255)
cccGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTg > 2:4164148/1‑93 (MQ=255)
cccGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTg > 2:4664757/1‑93 (MQ=255)
cccGGCCTTTCGCTGGTGTATGCGCCTGGGGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTg > 1:4307299/1‑93 (MQ=255)
ccGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGc > 1:1865086/1‑93 (MQ=255)
cGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCa > 1:5768330/1‑93 (MQ=255)
gCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCaga > 2:3633223/1‑93 (MQ=255)
gCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCaga > 2:4025222/1‑93 (MQ=255)
ccTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCagag < 1:6263499/93‑1 (MQ=255)
ccTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCagag > 1:3410615/1‑93 (MQ=255)
cTTTCGCTGGTGTATGCGCCTGGTGACACTAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAgaga > 2:6173626/1‑93 (MQ=255)
cTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAgaga > 2:3248104/1‑93 (MQ=255)
cTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAgaga < 1:1070752/93‑1 (MQ=255)
tttCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGAc < 1:2937673/93‑1 (MQ=255)
tCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGc > 2:5626195/1‑93 (MQ=255)
gCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGccc < 1:3197193/93‑1 (MQ=255)
tGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCa < 1:1020264/93‑1 (MQ=255)
ggTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAg > 1:5374401/1‑93 (MQ=255)
gtgtATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGa < 1:5725688/93‑1 (MQ=255)
tgtATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGaa < 1:5933926/93‑1 (MQ=255)
tgtATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGaa < 2:3069890/93‑1 (MQ=255)
tATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAgg < 1:5427683/93‑1 (MQ=255)
tATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAgg < 1:5152229/93‑1 (MQ=255)
aTGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAggg < 1:934812/93‑1 (MQ=255)
tGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAgggg > 1:2517824/1‑93 (MQ=255)
gcgcCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGt < 1:4496363/93‑1 (MQ=255)
ccTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCtt < 1:1513136/93‑1 (MQ=255)
tGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTg < 2:3678431/93‑1 (MQ=255)
tGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTg < 1:2599531/93‑1 (MQ=255)
ggTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGa > 2:3047453/1‑93 (MQ=255)
tGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAgg < 2:6030218/93‑1 (MQ=255)
|
GTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGC > NC_000913/3919801‑3919980
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAA > NC_000913/3919798‑3919984
|
CCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACA > SRR4302537.5414784/1‑94 (MQ=60)
CCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACA < SRR4302537.2888590/94‑1 (MQ=60)
CAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACAC < SRR4302537.1868023/94‑1 (MQ=60)
AGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACC > SRR4302537.5472593/1‑94 (MQ=60)
AGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACC > SRR4302537.855381/1‑94 (MQ=60)
GTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCA < SRR4302537.1117594/94‑1 (MQ=60)
TAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAG > SRR4302537.6101248/1‑94 (MQ=60)
TAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAG > SRR4302537.4499349/1‑94 (MQ=60)
CAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAG < SRR4302537.2490896/94‑1 (MQ=60)
AACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGG < SRR4302537.1057252/94‑1 (MQ=60)
AACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGG < SRR4302537.3504264/94‑1 (MQ=60)
CACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCA < SRR4302537.4115990/94‑1 (MQ=60)
CACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCA < SRR4302537.3777795/94‑1 (MQ=60)
CACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCA < SRR4302537.4505951/94‑1 (MQ=60)
CACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCA > SRR4302537.5848995/1‑94 (MQ=60)
CACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCA > SRR4302537.5132826/1‑94 (MQ=60)
ACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCCA > SRR4302537.826757/1‑94 (MQ=60)
ACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAA > SRR4302537.4835711/1‑94 (MQ=60)
CAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAAT < SRR4302537.5124498/94‑1 (MQ=60)
ACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATAT > SRR4302537.876517/1‑94 (MQ=60)
ACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATAT > SRR4302537.5955122/1‑94 (MQ=60)
TCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCAT < SRR4302537.2003211/94‑1 (MQ=60)
GCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAA < SRR4302537.2674967/94‑1 (MQ=60)
GCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAA < SRR4302537.2500370/94‑1 (MQ=60)
GCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAA > SRR4302537.2213424/1‑94 (MQ=60)
CCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAA < SRR4302537.1766033/94‑1 (MQ=60)
CCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAA > SRR4302537.3215573/1‑94 (MQ=60)
CCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAA < SRR4302537.421983/94‑1 (MQ=60)
CCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAA < SRR4302537.2300444/94‑1 (MQ=60)
CAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAAC < SRR4302537.6315472/94‑1 (MQ=60)
CAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAAC < SRR4302537.344063/94‑1 (MQ=60)
CAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAAC > SRR4302537.2409042/1‑94 (MQ=60)
CAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAAC > SRR4302537.1808729/1‑94 (MQ=60)
AGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACA > SRR4302537.3192842/1‑94 (MQ=60)
AGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACA > SRR4302537.4059538/1‑94 (MQ=60)
GAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAA < SRR4302537.3643642/94‑1 (MQ=60)
ATTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCCCCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAA < SRR4302537.21976/94‑1 (MQ=60)
ACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAA < SRR4302537.223428/94‑1 (MQ=60)
ACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAA < SRR4302537.3276829/94‑1 (MQ=60)
ACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAA > SRR4302537.2463087/1‑94 (MQ=60)
CTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAAC > SRR4302537.5739123/1‑94 (MQ=60)
TTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACG > SRR4302537.3922207/1‑94 (MQ=60)
TTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGT < SRR4302537.713323/94‑1 (MQ=60)
TTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGT < SRR4302537.1520278/94‑1 (MQ=60)
TTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGT < SRR4302537.2815139/94‑1 (MQ=60)
TGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTT > SRR4302537.4191061/1‑94 (MQ=60)
TGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTT > SRR4302537.5587382/1‑94 (MQ=60)
TGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCGGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTT < SRR4302537.264989/94‑1 (MQ=60)
GAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTA < SRR4302537.3961261/94‑1 (MQ=60)
AAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAG < SRR4302537.3358916/94‑1 (MQ=60)
AAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAG > SRR4302537.5371556/1‑94 (MQ=60)
AAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTGCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAG < SRR4302537.4094726/94‑1 (MQ=60)
AAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGG < SRR4302537.3038490/94‑1 (MQ=60)
GCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCA > SRR4302537.3599358/1‑94 (MQ=60)
GCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCA < SRR4302537.1360806/94‑1 (MQ=60)
CTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAG > SRR4302537.3735248/1‑94 (MQ=60)
TTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGA > SRR4302537.4066066/1‑94 (MQ=60)
CGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAA > SRR4302537.1533842/1‑94 (MQ=60)
GCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAG < SRR4302537.4732709/94‑1 (MQ=60)
GCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAG > SRR4302537.5794770/1‑94 (MQ=60)
CCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGA < SRR4302537.2055719/94‑1 (MQ=60)
CCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGA > SRR4302537.6131572/1‑94 (MQ=60)
CAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAC > SRR4302537.737026/1‑94 (MQ=60)
CAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAC > SRR4302537.1674703/1‑94 (MQ=60)
AAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACT < SRR4302537.2632462/94‑1 (MQ=60)
AATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTG < SRR4302537.3789344/94‑1 (MQ=60)
AATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTG > SRR4302537.2660672/1‑94 (MQ=60)
AATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTG > SRR4302537.1097541/1‑94 (MQ=60)
ATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGC < SRR4302537.838386/94‑1 (MQ=60)
ATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGC > SRR4302537.842681/1‑94 (MQ=60)
ATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGC > SRR4302537.6145840/1‑94 (MQ=60)
TGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCC > SRR4302537.1784533/1‑94 (MQ=60)
GCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCA < SRR4302537.3985539/94‑1 (MQ=60)
CGAATGTCCAGGCCCCCCGGCCTTTCGGTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAG < SRR4302537.3333140/94‑1 (MQ=60)
CGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAG < SRR4302537.1826528/94‑1 (MQ=60)
GAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGG < SRR4302537.1475430/94‑1 (MQ=60)
GAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGG < SRR4302537.3156560/94‑1 (MQ=60)
AATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGC > SRR4302537.1804179/1‑94 (MQ=60)
ATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCC < SRR4302537.3984358/94‑1 (MQ=60)
ATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCC < SRR4302537.2724596/94‑1 (MQ=60)
GTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCC < SRR4302537.6374090/94‑1 (MQ=60)
TCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCC > SRR4302537.4541764/1‑94 (MQ=60)
CCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCG > SRR4302537.5666361/1‑94 (MQ=60)
CCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCG < SRR4302537.5733750/94‑1 (MQ=60)
AGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCT > SRR4302537.6133258/1‑94 (MQ=60)
AGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCT > SRR4302537.3892866/1‑94 (MQ=60)
GGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTT < SRR4302537.4080836/94‑1 (MQ=60)
GCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTA > SRR4302537.121135/1‑94 (MQ=60)
CACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATT > SRR4302537.5679535/1‑94 (MQ=60)
ACCCGGCCTTTCGCTGGTGTATGCGCCTGGGGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTG > SRR4302537.4337238/1‑94 (MQ=60)
CCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGC > SRR4302537.1878075/1‑94 (MQ=60)
CCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGC > SRR4302537.5335025/1‑94 (MQ=60)
CCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGC > SRR4302537.283225/1‑94 (MQ=60)
CCGGCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCA > SRR4302537.5807866/1‑94 (MQ=60)
CGGCCTTTCGCTGGTGTATGCGCCTCGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGTAG < SRR4302537.6293337/94‑1 (MQ=60)
GCCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAG > SRR4302537.3434771/1‑94 (MQ=60)
CCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGA < SRR4302537.6306495/94‑1 (MQ=60)
CCTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGA > SRR4302537.3621908/1‑94 (MQ=60)
CTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGAC < SRR4302537.1078138/94‑1 (MQ=60)
CTTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGAC > SRR4302537.4928424/1‑94 (MQ=60)
TTTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACG < SRR4302537.2958299/94‑1 (MQ=60)
TTCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGC > SRR4302537.1735603/1‑94 (MQ=60)
TCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCC > SRR4302537.5187504/1‑94 (MQ=60)
TCGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCC < SRR4302537.645783/94‑1 (MQ=60)
CGCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCC > SRR4302537.3474979/1‑94 (MQ=60)
GCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCC < SRR4302537.3219677/94‑1 (MQ=60)
GCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCC > SRR4302537.1674918/1‑94 (MQ=60)
GCTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCC > SRR4302537.3646629/1‑94 (MQ=60)
CTGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCA > SRR4302537.5998104/1‑94 (MQ=60)
TGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAG > SRR4302537.5411153/1‑94 (MQ=60)
TGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAG < SRR4302537.1027296/94‑1 (MQ=60)
TGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAG > SRR4302537.1153430/1‑94 (MQ=60)
TGGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAG < SRR4302537.3518544/94‑1 (MQ=60)
GGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGA > SRR4302537.4727954/1‑94 (MQ=60)
GGTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGA > SRR4302537.5469547/1‑94 (MQ=60)
GTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAA > SRR4302537.771241/1‑94 (MQ=60)
GTGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAA < SRR4302537.5764882/94‑1 (MQ=60)
TGTATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAG < SRR4302537.5974647/94‑1 (MQ=60)
TATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGG < SRR4302537.5464690/94‑1 (MQ=60)
TATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGG < SRR4302537.1340262/94‑1 (MQ=60)
TATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGG > SRR4302537.27844/1‑94 (MQ=60)
TATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGG < SRR4302537.5187730/94‑1 (MQ=60)
ATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGG < SRR4302537.941255/94‑1 (MQ=60)
ATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGG > SRR4302537.2535514/1‑94 (MQ=60)
ATGCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGG < SRR4302537.3373825/94‑1 (MQ=60)
GCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTC < SRR4302537.115738/94‑1 (MQ=60)
GCGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTC < SRR4302537.4527466/94‑1 (MQ=60)
CGCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCT < SRR4302537.3628990/94‑1 (MQ=60)
GCCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTT < SRR4302537.3742849/94‑1 (MQ=60)
CCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTT < SRR4302537.3740266/94‑1 (MQ=60)
CCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTT > SRR4302537.4821441/1‑94 (MQ=60)
CCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTT > SRR4302537.2170499/1‑94 (MQ=60)
CCTGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTT < SRR4302537.1523709/94‑1 (MQ=60)
TGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGA < SRR4302537.2617711/94‑1 (MQ=60)
TGGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGA < SRR4302537.5455388/94‑1 (MQ=60)
GGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAG < SRR4302537.4404697/94‑1 (MQ=60)
GGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAG < SRR4302537.4404696/94‑1 (MQ=60)
GGTGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAG < SRR4302537.2542281/94‑1 (MQ=60)
TGACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGCCTTTGAGGC > SRR4302537.2549653/1‑94 (MQ=60)
GACACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCT > SRR4302537.5307687/1‑94 (MQ=60)
ACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAA > SRR4302537.2406925/1‑94 (MQ=60)
ACCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAA < SRR4302537.1458420/94‑1 (MQ=60)
|
CCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAA > NC_000913/3919798‑3919984
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
