Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,931,620 |
C→T |
P73S (CCA→TCA) |
rbsA → |
ATP‑binding component of D‑ribose high‑affinity transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,931,620 | 0 | C | T | 96.4%
| 795.8
/ 9.6
| 253 | P73S (CCA→TCA) | rbsA | ATP‑binding component of D‑ribose high‑affinity transport system |
| Reads supporting (aligned to +/- strand): ref base C (3/6); new base T (113/126); total (121/132) |
| Fisher's exact test for biased strand distribution p-value = 5.08e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.68e-02 |
Only 100 of 263 total aligned reads displayed.
AAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTC > NC_000913/3931530‑3931709
|
aaaTCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCa < 2:2735904/93‑1 (MQ=255)
aaTCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCaa > 2:2557358/1‑93 (MQ=255)
aaTCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCaa < 1:50058/93‑1 (MQ=255)
aaTCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCaa < 2:1739429/93‑1 (MQ=255)
aTCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCaaa > 2:1825358/1‑93 (MQ=255)
tCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCaaaa < 1:5555757/93‑1 (MQ=255)
tCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCaaaa < 2:2460877/93‑1 (MQ=255)
tCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGGCaaaa > 2:1890990/1‑93 (MQ=255)
caccaTGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATc > 2:1063362/1‑93 (MQ=255)
caccaTGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATc > 2:5288237/1‑93 (MQ=255)
accaTGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCt > 1:2681480/1‑93 (MQ=255)
ccaTGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCtt < 2:4353114/93‑1 (MQ=255)
caTGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTc > 1:1232268/1‑93 (MQ=255)
caTGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTc < 1:936776/93‑1 (MQ=255)
caTGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTc > 1:2585830/1‑93 (MQ=255)
tgatgaAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACTCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAAACTTccc < 2:4545660/93‑1 (MQ=255)
tgatgaAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTccc < 1:440978/93‑1 (MQ=255)
tgatgaAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTccc > 2:3108192/1‑93 (MQ=255)
gatgaAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCa < 2:3647932/93‑1 (MQ=255)
atgaAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAg > 2:1283158/1‑93 (MQ=255)
gaAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGa < 1:769879/93‑1 (MQ=255)
aaaGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGaa > 2:6409333/1‑93 (MQ=255)
aaGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAg > 1:1051533/1‑93 (MQ=255)
gTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGcc < 1:4210318/93‑1 (MQ=255)
gTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGcc < 1:4104094/93‑1 (MQ=255)
tcTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCgg < 1:6013137/92‑1 (MQ=255)
gCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCgg < 1:3574852/93‑1 (MQ=255)
gCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCgg < 1:2117513/93‑1 (MQ=255)
gCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCgg < 2:2372981/93‑1 (MQ=255)
ttACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGGACGAAACGACATTTACCGGGTCAAAATCTTCCCAAGAAACCcgga > 2:4235704/1‑93 (MQ=255)
ttACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGGAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCggga > 2:44495/1‑93 (MQ=255)
ttACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCggga > 1:525694/1‑93 (MQ=255)
tACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCgggat < 2:4817658/93‑1 (MQ=255)
cTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCgggattg < 1:1272695/93‑1 (MQ=255)
tGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCgggattgg < 1:4988634/93‑1 (MQ=255)
tGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTAAAAATCTTCCCAGGAAGCCgggattgg < 1:3241791/93‑1 (MQ=255)
gCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCgggattggga > 2:2876384/1‑93 (MQ=255)
tCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCCAAATCTTCCCAGGAAGCCGGGATTGGGATTa > 2:5532276/1‑93 (MQ=255)
tCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTa > 1:4402383/1‑93 (MQ=255)
cTATACTCGCTATGCCGGTACGCTTTTATGGCTGGGGATTGAAACGATATTTACCGGGTCAAAATCTTCCCAGGAATCCGGGATTTGGATTAt > 2:6473363/1‑93 (MQ=255)
cTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTAt < 1:3083551/93‑1 (MQ=255)
cTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAAAGACATTTACCGGGTCAAAATCTTCCCAGGAATGCGGGATGGGGATTAt > 2:524401/1‑93 (MQ=255)
tataCTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATc > 1:460321/1‑93 (MQ=255)
tataCTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATc > 2:54264/1‑93 (MQ=255)
taCTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCa > 2:4712598/1‑93 (MQ=255)
taCTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCa < 1:5909783/93‑1 (MQ=255)
taCTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATATTTCCAGGAAGCCGGGATTGGGATTATCCa > 1:3433138/1‑93 (MQ=255)
cTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATc < 2:89822/93‑1 (MQ=255)
tCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCa < 1:4288181/93‑1 (MQ=255)
cgcgATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAg < 1:2261908/93‑1 (MQ=255)
cgATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGa < 1:6446313/93‑1 (MQ=255)
cgATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGa < 1:54634/93‑1 (MQ=255)
gATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGaa < 2:4623987/93‑1 (MQ=255)
aTGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAAc > 1:4523160/1‑93 (MQ=255)
gCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTg > 1:5314968/1‑93 (MQ=255)
gCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTg < 1:1414437/93‑1 (MQ=255)
ccGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGa < 1:4149200/93‑1 (MQ=255)
ccGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGa < 1:1466819/93‑1 (MQ=255)
gTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGGTTATCCATCAGGAACTTAAcc > 1:335658/1‑93 (MQ=255)
gTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAAcc < 1:6321817/93‑1 (MQ=255)
gTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAAcc < 2:3069316/93‑1 (MQ=255)
gCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGAt < 2:1492712/93‑1 (MQ=255)
cTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATc > 1:2358339/1‑93 (MQ=255)
ttttATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATcc < 1:4474253/93‑1 (MQ=255)
ttttATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATcc > 2:6283284/1‑93 (MQ=255)
tttATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATccc > 2:1353870/1‑93 (MQ=255)
tttATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAACCGGGATTGGGATTATCCATCAGGAACTGAACGTGATccc > 2:3583823/1‑93 (MQ=255)
aTGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCa < 2:5098991/93‑1 (MQ=255)
tGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGa < 1:4903312/93‑1 (MQ=255)
tGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGa > 2:5338859/1‑93 (MQ=255)
ggggAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGAc > 1:484603/1‑93 (MQ=255)
ggggAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGCTGAc > 2:4901808/1‑93 (MQ=255)
ggggAAAGAAACGACATTTACCGGGTCAAAAGCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGAc < 1:2038442/93‑1 (MQ=255)
gggAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGAcc < 1:541887/93‑1 (MQ=255)
gggAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGAcc < 2:3720984/93‑1 (MQ=255)
ggAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCa < 1:2382004/93‑1 (MQ=255)
aaagaaaCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCAtt < 1:1110159/93‑1 (MQ=255)
aaagaaaCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCAtt < 2:4335669/93‑1 (MQ=255)
aaagaaaCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCAtt < 2:3571610/93‑1 (MQ=255)
aagaaaCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTg > 1:2761833/1‑93 (MQ=255)
aagaaaCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTg > 2:607872/1‑93 (MQ=255)
aagaaaCACCATTTCCCGGGTAAAAATC‑TCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCACGCAGTTGACCATTGc < 1:575770/93‑1 (MQ=255)
agaaaCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGTATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGc > 1:3473465/1‑93 (MQ=255)
agaaaCGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGc < 2:3986865/93‑1 (MQ=255)
aaCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGa > 1:3774305/1‑93 (MQ=255)
aCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGaa > 1:2210604/1‑93 (MQ=255)
aCGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGaa > 2:4102753/1‑93 (MQ=255)
gACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGaaaa > 1:870966/1‑93 (MQ=255)
gACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGaaaa > 2:5012217/1‑93 (MQ=255)
aCATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGaaaaa > 1:1503025/1‑92 (MQ=255)
cATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATACCGCAGTTGACCATTGCCGAAAACa > 2:1436305/1‑93 (MQ=255)
ttACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACAttt < 2:3316585/93‑1 (MQ=255)
tACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACAtttt < 2:5739646/93‑1 (MQ=255)
tACCGGGGCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACAtttt > 2:6113748/1‑93 (MQ=255)
aCCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTc > 2:4035912/1‑93 (MQ=255)
aCCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTc > 1:1781161/1‑93 (MQ=255)
ccGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTcc < 1:1890990/93‑1 (MQ=255)
cGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCt < 2:2713916/93‑1 (MQ=255)
gggTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTc < 1:3699577/93‑1 (MQ=255)
gggTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTc > 1:3328377/1‑93 (MQ=255)
|
AAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTC > NC_000913/3931530‑3931709
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTAAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCGGTC > NC_000913/3931527‑3931713
|
GGTAAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGT < SRR4302537.564367/94‑1 (MQ=60)
GGTAAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGG > SRR4302537.4480416/1‑94 (MQ=60)
AAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAA > SRR4302537.5023391/1‑94 (MQ=60)
AATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAA < SRR4302537.50430/94‑1 (MQ=60)
ATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAA < SRR4302537.3379280/94‑1 (MQ=60)
ATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAA < SRR4302537.597997/94‑1 (MQ=60)
TCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAAT < SRR4302537.5593692/94‑1 (MQ=60)
TCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAAT > SRR4302537.1664756/1‑94 (MQ=60)
TCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAAT < SRR4302537.4618884/94‑1 (MQ=60)
CACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCT > SRR4302537.870331/1‑94 (MQ=60)
CACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCT > SRR4302537.2700202/1‑94 (MQ=60)
CACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCT < SRR4302537.5365634/94‑1 (MQ=60)
CCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTC > SRR4302537.2603923/1‑94 (MQ=60)
CCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTC > SRR4302537.1240839/1‑94 (MQ=60)
CCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTC > SRR4302537.1658250/1‑94 (MQ=60)
CCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTC < SRR4302537.5326907/94‑1 (MQ=60)
CCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACAGGGGCAAAATCTTC > SRR4302537.713941/1‑94 (MQ=60)
CATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCC < SRR4302537.4434136/94‑1 (MQ=60)
CATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCC < SRR4302537.943230/94‑1 (MQ=60)
TGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCA < SRR4302537.1945425/94‑1 (MQ=60)
TGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCA < SRR4302537.2501400/94‑1 (MQ=60)
TGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCA < SRR4302537.444038/94‑1 (MQ=60)
TGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCA > SRR4302537.4946748/1‑94 (MQ=60)
TATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCCG > SRR4302537.2671825/1‑94 (MQ=60)
ATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGG > SRR4302537.89545/1‑94 (MQ=60)
GAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAA < SRR4302537.3787334/94‑1 (MQ=60)
GAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAA < SRR4302537.775157/94‑1 (MQ=60)
AAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAG > SRR4302537.4359887/1‑94 (MQ=60)
AAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAG < SRR4302537.6012220/94‑1 (MQ=60)
AAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAG > SRR4302537.1058786/1‑94 (MQ=60)
AAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGC > SRR4302537.213268/1‑94 (MQ=60)
AGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGAC > SRR4302537.6179811/1‑94 (MQ=60)
GTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCG < SRR4302537.4239687/94‑1 (MQ=60)
GTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCG < SRR4302537.4239686/94‑1 (MQ=60)
GTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCG < SRR4302537.4132761/94‑1 (MQ=60)
TCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGG < SRR4302537.6054449/94‑1 (MQ=60)
GCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGG < SRR4302537.3600063/94‑1 (MQ=60)
GCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGG < SRR4302537.2132427/94‑1 (MQ=60)
CTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGA > SRR4302537.4195263/1‑94 (MQ=60)
CTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGA > SRR4302537.529300/1‑94 (MQ=60)
TTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGAT < SRR4302537.789383/94‑1 (MQ=60)
TTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGAT > SRR4302537.3063983/1‑94 (MQ=60)
TACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATT < SRR4302537.2104427/94‑1 (MQ=60)
AGTGGCATCTATACTCGCGATGCCGTTACGCTTTTATGGCTGGGTAAAGAAACGGCATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTG < SRR4302537.5545170/94‑1 (MQ=60)
ACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTG > SRR4302537.1477191/1‑94 (MQ=60)
ACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTG < SRR4302537.5181149/94‑1 (MQ=60)
CTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGG < SRR4302537.356674/94‑1 (MQ=60)
CTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGG < SRR4302537.1281541/94‑1 (MQ=60)
ATGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGG < SRR4302537.1266741/94‑1 (MQ=60)
TGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGG < SRR4302537.1097747/94‑1 (MQ=60)
TGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGG < SRR4302537.5023014/94‑1 (MQ=60)
TGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTAAAAATCTTCCCAGGAAGCCGGGATTGGG < SRR4302537.3264638/94‑1 (MQ=60)
GCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGAT < SRR4302537.2336448/94‑1 (MQ=60)
GCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGGCAAAATCTTCCCAGGAAGCCGGGATTGGGAT > SRR4302537.4888148/1‑94 (MQ=60)
CATCTATACTCGCGATGCCGGTACGCTTTTATTGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGTCGGGGTTGGGATT > SRR4302537.1163587/1‑94 (MQ=60)
ATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAGAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTA > SRR4302537.4697585/1‑94 (MQ=60)
ATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTA > SRR4302537.4432761/1‑94 (MQ=60)
CTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATC < SRR4302537.3105028/94‑1 (MQ=60)
CTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATC > SRR4302537.463490/1‑94 (MQ=60)
TATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCC < SRR4302537.2258552/94‑1 (MQ=60)
ATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCA < SRR4302537.455366/94‑1 (MQ=60)
ATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCA > SRR4302537.3341059/1‑94 (MQ=60)
ATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATATTTCCAGGAAGCCGGGATTGGGATTATCCA > SRR4302537.3457437/1‑94 (MQ=60)
TACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCAT < SRR4302537.5950336/94‑1 (MQ=60)
ACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATC < SRR4302537.4300369/94‑1 (MQ=60)
CTCGCGATGCCGGTACGCTTTGATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCA < SRR4302537.5023705/94‑1 (MQ=60)
TCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAG < SRR4302537.4317990/94‑1 (MQ=60)
TCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAACCGGGATTGGGATTATCCATCAG > SRR4302537.1168108/1‑94 (MQ=60)
CGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGG < SRR4302537.2277869/94‑1 (MQ=60)
CGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAA < SRR4302537.55036/94‑1 (MQ=60)
CGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAA < SRR4302537.6490042/94‑1 (MQ=60)
GATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAAC > SRR4302537.4554456/1‑94 (MQ=60)
TGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTG < SRR4302537.3960624/94‑1 (MQ=60)
TGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTG > SRR4302537.5351466/1‑94 (MQ=60)
GCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGA < SRR4302537.1424281/94‑1 (MQ=60)
CCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAA < SRR4302537.4178162/94‑1 (MQ=60)
CCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAA < SRR4302537.1477019/94‑1 (MQ=60)
CGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAAC > SRR4302537.2078502/1‑94 (MQ=60)
CGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAAC < SRR4302537.1469427/94‑1 (MQ=60)
GGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGGTTATCCATCAGGAACTTAACC > SRR4302537.337980/1‑94 (MQ=60)
GGTACGCTTTTATGGCTGGGGAAAGAAACGACACTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACC < SRR4302537.1373750/94‑1 (MQ=60)
GTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCT < SRR4302537.6365071/94‑1 (MQ=60)
GTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCT < SRR4302537.5485063/94‑1 (MQ=60)
GTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCT > SRR4302537.2251496/1‑94 (MQ=60)
GTACGCTTTTATGGCTGGGGAAAGAAACGACATTTAACGGGGCAAAATCTTCCCAAGAAACCGGGATTGGGATTATCCATCAGGAACTGAACCT > SRR4302537.1451257/1‑94 (MQ=60)
GCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATC > SRR4302537.2374974/1‑94 (MQ=60)
CTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCC > SRR4302537.3095405/1‑94 (MQ=60)
CTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCC > SRR4302537.4890137/1‑94 (MQ=60)
TTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCC < SRR4302537.5433343/94‑1 (MQ=60)
TTTTATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCC < SRR4302537.4505203/94‑1 (MQ=60)
TATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAACCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCA < SRR4302537.3478633/94‑1 (MQ=60)
ATGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAG > SRR4302537.5096869/1‑94 (MQ=60)
TGGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGT < SRR4302537.4532825/94‑1 (MQ=60)
GGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTT < SRR4302537.5949967/94‑1 (MQ=60)
GGCTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTT < SRR4302537.2737433/94‑1 (MQ=60)
CTGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGA > SRR4302537.4590067/1‑94 (MQ=60)
TGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGAC < SRR4302537.4937155/94‑1 (MQ=60)
TGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGAC > SRR4302537.1003893/1‑94 (MQ=60)
TGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGAC > SRR4302537.487925/1‑94 (MQ=60)
TGGGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGAC < SRR4302537.359094/94‑1 (MQ=60)
GGGGAAAGAAACGACATTTACCGGGTCAAAAGCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACC < SRR4302537.2052657/94‑1 (MQ=60)
GGGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCA < SRR4302537.545619/94‑1 (MQ=60)
GGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCAT < SRR4302537.2398789/94‑1 (MQ=60)
GGAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCAT > SRR4302537.4440135/1‑94 (MQ=60)
GAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATT > SRR4302537.2379047/1‑94 (MQ=60)
GAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATT < SRR4302537.5788907/94‑1 (MQ=60)
GAAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATT < SRR4302537.6230107/94‑1 (MQ=60)
GAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAGCTGAACCTGATCCCGCAGTTGACCATT > SRR4302537.2595621/1‑94 (MQ=60)
AAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTG < SRR4302537.132276/94‑1 (MQ=60)
AAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTG > SRR4302537.2781101/1‑94 (MQ=60)
AAAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTG < SRR4302537.1117830/94‑1 (MQ=60)
AAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGTATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGC > SRR4302537.3498044/1‑94 (MQ=60)
AAGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGC > SRR4302537.4322829/1‑94 (MQ=60)
AAGAAACACCATTTCCCGGGTAAAAATC‑TCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCACGCAGTTGACCATTGCC < SRR4302537.579716/94‑1 (MQ=60)
AGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCC > SRR4302537.3609612/1‑94 (MQ=60)
AGAAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCC < SRR4302537.5669396/94‑1 (MQ=60)
AAACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGA > SRR4302537.3800802/1‑94 (MQ=60)
AACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAA > SRR4302537.3365724/1‑94 (MQ=60)
AACGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAA > SRR4302537.2226193/1‑94 (MQ=60)
CGACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAA > SRR4302537.876949/1‑94 (MQ=60)
GACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAAC < SRR4302537.2619155/94‑1 (MQ=60)
GACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAAA > SRR4302537.1513517/1‑94 (MQ=60)
ACATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACA > SRR4302537.645601/1‑94 (MQ=60)
CATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACAT < SRR4302537.3495973/94‑1 (MQ=60)
CATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACAT > SRR4302537.3434296/1‑94 (MQ=60)
ATTTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATT > SRR4302537.3290063/1‑94 (MQ=60)
TTACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTT < SRR4302537.769368/94‑1 (MQ=60)
TACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTC > SRR4302537.1793574/1‑94 (MQ=60)
TACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTC > SRR4302537.3167261/1‑94 (MQ=60)
TACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTC > SRR4302537.1900364/1‑94 (MQ=60)
ACCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCC < SRR4302537.1815425/94‑1 (MQ=60)
ACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCC < SRR4302537.3862751/94‑1 (MQ=60)
CCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCT < SRR4302537.4152530/94‑1 (MQ=60)
CCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCT < SRR4302537.3775095/94‑1 (MQ=60)
CCGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCT < SRR4302537.1904134/94‑1 (MQ=60)
CGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTC > SRR4302537.4473123/1‑94 (MQ=60)
CGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTC > SRR4302537.3351930/1‑94 (MQ=60)
CGGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTC > SRR4302537.2317134/1‑94 (MQ=60)
GGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCG < SRR4302537.3725605/94‑1 (MQ=60)
GGGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCG < SRR4302537.5487930/94‑1 (MQ=60)
GGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCGG < SRR4302537.2944646/94‑1 (MQ=60)
GGTCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCGG < SRR4302537.5994933/94‑1 (MQ=60)
TCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCGGTC < SRR4302537.6455313/94‑1 (MQ=60)
TCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCGGTC < SRR4302537.1830427/94‑1 (MQ=60)
|
GGTAAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCGGTC > NC_000913/3931527‑3931713
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
