Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,948,864 |
A→G |
T228A (ACC→GCC) |
ilvG → |
acetolactate synthase II large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,948,864 | 0 | A | G | 100.0%
| 804.7
/ NA
| 233 | T228A (ACC→GCC) | ilvG | acetolactate synthase II large subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (119/114); total (119/114) |
Only 100 of 244 total aligned reads displayed.
AAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAAC > NC_000913/3948774‑3948953
|
aaaCCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTgccgcc > 1:3212979/1‑93 (MQ=255)
aaCCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCt < 2:823709/93‑1 (MQ=255)
aaCCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCt < 2:4160778/93‑1 (MQ=255)
aCCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTg > 2:6176340/1‑93 (MQ=255)
aCCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTg < 2:3457833/93‑1 (MQ=255)
cGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTa > 2:3261360/1‑93 (MQ=255)
aTGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACg > 2:5393630/1‑93 (MQ=255)
aTGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACg > 1:239607/1‑93 (MQ=255)
gCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCt < 2:4760469/93‑1 (MQ=255)
gCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCt < 2:1312822/93‑1 (MQ=255)
gCTGTACGTTGGCGGTGGCGTGGGGATGCCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCt > 2:1417563/1‑93 (MQ=255)
cTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTg > 1:558926/1‑93 (MQ=255)
cTGTAAGTTGGAGGTGGCGTGGGTATGGCGAAGGCAGTCCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTg < 2:5793530/93‑1 (MQ=255)
tGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGa > 1:1331092/1‑93 (MQ=255)
tACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGaaa < 2:3615694/93‑1 (MQ=255)
tACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGaaa < 1:5681671/93‑1 (MQ=255)
cGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAgg < 1:1793521/93‑1 (MQ=255)
cGTTGGCGGTGGCGTGGGTATGGCACAGGCAGTTCCGGCTTTGCGTGAATCTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAgg < 1:3457993/93‑1 (MQ=255)
gTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAggg > 1:5343029/1‑93 (MQ=255)
ttGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGc > 2:2431007/1‑93 (MQ=255)
tgggCGTTGGCGTGGGTATGGCGCAGGAAGTGCCGGCTTTGCGTGAATTCCTCGCTGCCACAAAAATGCCTCCCGCCTGTACGCTGAAAGGGc < 1:6062368/91‑1 (MQ=255)
tGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCt < 2:2045469/93‑1 (MQ=255)
ggCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTg < 1:5937739/93‑1 (MQ=255)
ggCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTg < 1:3711149/93‑1 (MQ=255)
ggCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTAAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTg < 1:2773407/93‑1 (MQ=255)
gCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTgg < 1:1730757/93‑1 (MQ=255)
gCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTgg < 1:4244644/93‑1 (MQ=255)
gCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTgg < 1:3885484/93‑1 (MQ=255)
gTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGgcg > 1:6299982/1‑93 (MQ=255)
ggCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCa < 1:1128702/93‑1 (MQ=255)
gCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAg > 2:1505401/1‑93 (MQ=255)
gTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTa > 1:516099/1‑93 (MQ=255)
tGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAg > 2:5257699/1‑93 (MQ=255)
tGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAg > 2:679909/1‑93 (MQ=255)
gggTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGa > 2:2661659/1‑93 (MQ=255)
ggTATGGCGCAGGCAGTTCCGGCTTTGCTTGAATTTCTCGCTGCCACAAAAATGCCTACCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGaa < 2:74421/93‑1 (MQ=255)
ggTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGaa < 1:3827145/93‑1 (MQ=255)
ggTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGaa > 2:4051385/1‑93 (MQ=255)
tATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGc > 1:1449316/1‑93 (MQ=255)
aTGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCa > 1:2831203/1‑93 (MQ=255)
aTGGCGCAGGCAGTCCGGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTTCGGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCa < 2:4612898/93‑1 (MQ=255)
ggCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGa < 2:5705246/93‑1 (MQ=255)
gcgcAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGAt > 2:5626812/1‑93 (MQ=255)
aggcagTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATc < 2:4601094/93‑1 (MQ=255)
tCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTa < 1:6228030/93‑1 (MQ=255)
cGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATc > 2:2601975/1‑93 (MQ=255)
cGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATc > 2:4945203/1‑93 (MQ=255)
cGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATc < 2:3000568/93‑1 (MQ=255)
ggCTTTGGGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCt < 1:436993/93‑1 (MQ=255)
gCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTg > 2:1837595/1‑93 (MQ=255)
gCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTg > 1:1652339/1‑93 (MQ=255)
gCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTg > 1:4511875/1‑93 (MQ=255)
gCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTg > 2:6106369/1‑93 (MQ=255)
cTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTgg < 1:2657227/93‑1 (MQ=255)
cTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTgg < 1:1595605/93‑1 (MQ=255)
tttGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTggg < 2:3334413/93‑1 (MQ=255)
tttGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTggg < 2:2351916/93‑1 (MQ=255)
tttGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTggg > 2:4459433/1‑93 (MQ=255)
tttGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTgga > 2:1015382/1‑92 (MQ=255)
gCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCAt < 1:1538446/93‑1 (MQ=255)
tggAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGc < 2:1126088/91‑1 (MQ=255)
gTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGc > 2:5144291/1‑93 (MQ=255)
gTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGc > 2:6159544/1‑93 (MQ=255)
gTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGc < 1:253092/93‑1 (MQ=255)
gTGAATTGCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAATCAGATTATCCGTACTATCTGGGCATGc < 2:2749188/93‑1 (MQ=255)
tGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCt < 1:5204819/93‑1 (MQ=255)
tGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCt > 1:2354147/1‑93 (MQ=255)
gattttCTCGCTGCCACAAAAATGCCTGCCGCCTGTACCCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTg < 1:456958/90‑1 (MQ=255)
gAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTg < 1:2479101/93‑1 (MQ=255)
gAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTg > 1:3427186/1‑93 (MQ=255)
gAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTg > 2:1627150/1‑93 (MQ=255)
aaTTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTgg < 1:3104223/93‑1 (MQ=255)
ttCTCGCTGCCACAAAAATGCCTTCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGa < 2:3164118/93‑1 (MQ=255)
ttCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGTCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTgggta < 2:6376794/93‑3 (MQ=255)
tcctcGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGa < 1:71989/91‑1 (MQ=255)
tctcGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGAt > 2:5477640/1‑93 (MQ=255)
cGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCa < 2:1603868/93‑1 (MQ=255)
gCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCAc < 2:3849283/93‑1 (MQ=255)
cTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACg > 2:229947/1‑93 (MQ=255)
tGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACgg > 2:4201586/1‑93 (MQ=255)
tGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACgg < 1:1078564/93‑1 (MQ=255)
gCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGTGCATGCTGGGGATGCACGGc > 2:3709442/1‑93 (MQ=255)
gCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGc > 1:4776989/1‑93 (MQ=255)
ccACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGcc > 1:4799565/1‑92 (MQ=255)
cacaAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCAc > 1:562008/1‑93 (MQ=255)
cacaAAAAAGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCAc > 2:6301709/1‑93 (MQ=255)
caAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCa < 2:4809616/93‑1 (MQ=255)
caAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCa > 2:5866719/1‑93 (MQ=255)
caAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCa > 2:6217495/1‑93 (MQ=255)
aaaaaTGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCaa > 1:540263/1‑93 (MQ=255)
aaaaTGCCTCCCGCCTGTACGCTGAAAGGGCTGGGCGTAGTAGAAGCAGATTATCCGTTCTATCTGGACATGCTGGGGATGCACGGCACCaaa > 2:1943988/1‑93 (MQ=255)
aaaTGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAg < 2:3121806/93‑1 (MQ=255)
aaTGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGc > 2:5884794/1‑93 (MQ=255)
aaTGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGc > 1:5517690/1‑93 (MQ=255)
aTGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCg < 1:699631/93‑1 (MQ=255)
tgccttccGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCgg < 2:4896261/93‑1 (MQ=255)
ggcctgccGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCgg < 1:3946079/92‑1 (MQ=255)
gcctgccGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGc < 1:1838632/93‑1 (MQ=255)
cctgccGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCa > 1:972679/1‑93 (MQ=255)
gccgccTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAAc > 1:4397161/1‑93 (MQ=255)
|
AAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAAC > NC_000913/3948774‑3948953
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTC > NC_000913/3948771‑3948956
|
CAAAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCG < SRR4302537.3666546/94‑1 (MQ=60)
AAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATTGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCC > SRR4302537.3279482/1‑94 (MQ=60)
AAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCC > SRR4302537.3235585/1‑94 (MQ=60)
ACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGT < SRR4302537.1592849/94‑1 (MQ=60)
CCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTA > SRR4302537.6104356/1‑94 (MQ=60)
CCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTA < SRR4302537.4630365/94‑1 (MQ=60)
CCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTA < SRR4302537.5472973/94‑1 (MQ=60)
CCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGATCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTA > SRR4302537.3480676/1‑94 (MQ=60)
GATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACG > SRR4302537.241303/1‑94 (MQ=60)
GATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACG < SRR4302537.1764674/94‑1 (MQ=60)
GCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTG > SRR4302537.562774/1‑94 (MQ=60)
GCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTATCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTG < SRR4302537.3840142/94‑1 (MQ=60)
CTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGA > SRR4302537.2591372/1‑94 (MQ=60)
CTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGA > SRR4302537.1340369/1‑94 (MQ=60)
CTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGA > SRR4302537.4463108/1‑94 (MQ=60)
TGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAA < SRR4302537.1101004/94‑1 (MQ=60)
TGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAA > SRR4302537.730948/1‑94 (MQ=60)
TGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAA > SRR4302537.1422007/1‑94 (MQ=60)
GTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAA > SRR4302537.1728020/1‑94 (MQ=60)
TACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACACAAATGCCTGCCGCCTGTACGCTGTAAG > SRR4302537.3355378/1‑94 (MQ=60)
TACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAG < SRR4302537.870960/94‑1 (MQ=60)
TACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAG < SRR4302537.5720534/94‑1 (MQ=60)
ACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGG > SRR4302537.472154/1‑94 (MQ=60)
CGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGG > SRR4302537.2431084/1‑94 (MQ=60)
CGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGG < SRR4302537.1806036/94‑1 (MQ=60)
CGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGG > SRR4302537.5379644/1‑94 (MQ=60)
CGTTGGCGGTGGCGTGGGTATGGCACAGGCAGTTCCGGCTTTGCGTGAATCTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGG < SRR4302537.3482442/94‑1 (MQ=60)
GTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGC < SRR4302537.3515566/94‑1 (MQ=60)
GTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGC < SRR4302537.1355327/94‑1 (MQ=60)
TGGGCGTTGGCGTGGGTATGGCGCAGGAAGTGCCGGCTTTGCGTGAATTCCTCGCTGCCACAAAAATGCCTCCCGCCTGTACGCTGAAAGGGCT < SRR4302537.6104021/94‑1 (MQ=60)
TGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTG < SRR4302537.5994693/94‑1 (MQ=60)
GGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGG < SRR4302537.3737234/94‑1 (MQ=60)
GGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGG < SRR4302537.5978485/94‑1 (MQ=60)
GGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTAAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGG < SRR4302537.2792791/94‑1 (MQ=60)
GCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGG < SRR4302537.4274146/94‑1 (MQ=60)
GCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGG < SRR4302537.3912664/94‑1 (MQ=60)
GCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGG < SRR4302537.1742837/94‑1 (MQ=60)
GGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCG > SRR4302537.6343130/1‑94 (MQ=60)
GGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAG < SRR4302537.1136533/94‑1 (MQ=60)
CGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTA > SRR4302537.519649/1‑94 (MQ=60)
GTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAG < SRR4302537.1480370/94‑1 (MQ=60)
GTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAG > SRR4302537.2766109/1‑94 (MQ=60)
GGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAA < SRR4302537.5649202/94‑1 (MQ=60)
GGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAG < SRR4302537.4122351/94‑1 (MQ=60)
GGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAG < SRR4302537.131184/94‑1 (MQ=60)
GGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAG < SRR4302537.3853979/94‑1 (MQ=60)
GTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGC > SRR4302537.1459412/1‑94 (MQ=60)
TATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCA > SRR4302537.2552392/1‑94 (MQ=60)
TATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCA < SRR4302537.3956853/94‑1 (MQ=60)
TATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCA > SRR4302537.2850986/1‑94 (MQ=60)
ATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGACAGGGCTGGGCGCAGTAGAAGCAG > SRR4302537.2823594/1‑94 (MQ=60)
ATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAG < SRR4302537.5672226/94‑1 (MQ=60)
ATGGCGCAGGCAGTTCCGCCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTTCTGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAG < SRR4302537.6045476/94‑1 (MQ=60)
GCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTAT < SRR4302537.5120449/94‑1 (MQ=60)
CAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATC > SRR4302537.1825108/1‑94 (MQ=60)
AGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCC > SRR4302537.6306506/1‑94 (MQ=60)
GGCAGTGCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCG < SRR4302537.1696057/94‑1 (MQ=60)
CAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTA > SRR4302537.3026711/1‑94 (MQ=60)
CAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCC‑TAC > SRR4302537.3224120/1‑94 (MQ=60)
AGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTAC > SRR4302537.5607698/1‑94 (MQ=60)
TCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTAT < SRR4302537.6270879/94‑1 (MQ=60)
TCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTAT < SRR4302537.5934708/94‑1 (MQ=60)
TCCGCCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTAT < SRR4302537.4496954/94‑1 (MQ=60)
CCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATC > SRR4302537.5429200/1‑94 (MQ=60)
CCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATC > SRR4302537.562378/1‑94 (MQ=60)
GGCTTTGGGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTG < SRR4302537.440038/94‑1 (MQ=60)
GGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTG > SRR4302537.4543076/1‑94 (MQ=60)
GGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTG > SRR4302537.1663924/1‑94 (MQ=60)
GGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTG < SRR4302537.250298/94‑1 (MQ=60)
CTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGG < SRR4302537.2675798/94‑1 (MQ=60)
CTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGG < SRR4302537.1606755/94‑1 (MQ=60)
CTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACCATCTGGG > SRR4302537.2804594/1‑94 (MQ=60)
TTGGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGC < SRR4302537.2407346/94‑1 (MQ=60)
TTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCA > SRR4302537.4414487/1‑94 (MQ=60)
TGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCAT > SRR4302537.1576593/1‑94 (MQ=60)
GCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATG > SRR4302537.2262324/1‑94 (MQ=60)
GCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATG > SRR4302537.519895/1‑94 (MQ=60)
GCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATG > SRR4302537.3901951/1‑94 (MQ=60)
GCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATG < SRR4302537.1549186/94‑1 (MQ=60)
CGTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGC > SRR4302537.4594171/1‑94 (MQ=60)
GTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCT < SRR4302537.254889/94‑1 (MQ=60)
GTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCT > SRR4302537.2370747/1‑94 (MQ=60)
GTGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCT > SRR4302537.4321133/1‑94 (MQ=60)
TGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTG < SRR4302537.5240622/94‑1 (MQ=60)
TGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTG < SRR4302537.4914143/94‑1 (MQ=60)
TGAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTG > SRR4302537.3451444/1‑94 (MQ=60)
GATTTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACCCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGG < SRR4302537.460108/94‑1 (MQ=60)
GAATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGG < SRR4302537.2496527/94‑1 (MQ=60)
AATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGG < SRR4302537.3125905/94‑1 (MQ=60)
AATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGG < SRR4302537.688991/94‑1 (MQ=60)
ATTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGG > SRR4302537.4100592/1‑94 (MQ=60)
TTTCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGA > SRR4302537.242127/1‑94 (MQ=60)
TCCTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGAT < SRR4302537.72517/94‑1 (MQ=60)
CTCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGC > SRR4302537.3687473/1‑94 (MQ=60)
TCGCTGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCA > SRR4302537.538685/1‑94 (MQ=60)
TGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGC < SRR4302537.1086004/94‑1 (MQ=60)
TGCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGC > SRR4302537.4809966/1‑94 (MQ=60)
GCCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCC > SRR4302537.4832679/1‑94 (MQ=60)
CCACAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCAC > SRR4302537.565876/1‑94 (MQ=60)
CAAAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAA > SRR4302537.543982/1‑94 (MQ=60)
AAAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAG < SRR4302537.724648/94‑1 (MQ=60)
AAATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGC > SRR4302537.5555364/1‑94 (MQ=60)
AATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCG < SRR4302537.2123939/94‑1 (MQ=60)
ATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGG > SRR4302537.4823639/1‑94 (MQ=60)
ATGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGG < SRR4302537.704416/94‑1 (MQ=60)
TGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGC < SRR4302537.3873429/94‑1 (MQ=60)
GGCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGC < SRR4302537.3973681/94‑1 (MQ=60)
GCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCA < SRR4302537.1851426/94‑1 (MQ=60)
GCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCA > SRR4302537.979384/1‑94 (MQ=60)
GCCTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCA < SRR4302537.997216/94‑1 (MQ=60)
CTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAA < SRR4302537.1656797/94‑1 (MQ=60)
CTGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAA < SRR4302537.6427908/94‑1 (MQ=60)
TGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAAC > SRR4302537.5300581/1‑94 (MQ=60)
TGCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAAC > SRR4302537.4427499/1‑94 (MQ=60)
GCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACT < SRR4302537.5665306/94‑1 (MQ=60)
GCCGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACT > SRR4302537.2996132/1‑94 (MQ=60)
CGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTC < SRR4302537.5568992/94‑1 (MQ=60)
CGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTC > SRR4302537.3013113/1‑94 (MQ=60)
CGCCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTC < SRR4302537.888403/94‑1 (MQ=60)
|
CAAAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTC > NC_000913/3948771‑3948956
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
