Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 882 254.4 12957588 98.0% 12698436 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGTCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑C‑‑‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT  >  NC_000913/3957454‑3957627
                                                                                             |                                                                                         
TGTCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC                                                                                           <  SRR4302537.1040758/94‑1 (MQ=60)
 GTCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑G                                                                                        >  SRR4302537.5478057/1‑94 (MQ=60)
  TCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GG                                                                                       <  SRR4302537.5832485/94‑1 (MQ=60)
  TCAGGCGGCGATTTTAGCATGATCAGCAGATGCTAACGTAATAGTCAGACAGAGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GG                                                                                       <  SRR4302537.6522536/94‑1 (MQ=60)
    AGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggc                                                                                       <  SRR4302537.1906468/94‑5 (MQ=60)
     GGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggct                                                                                      <  SRR4302537.445153/94‑6 (MQ=60)
       CGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttc                                                                                    <  SRR4302537.674428/94‑8 (MQ=60)
        GGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcg                                                                                   <  SRR4302537.1689029/94‑9 (MQ=60)
          CGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCcggcttcgca                                                                                 >  SRR4302537.2014101/1‑84 (MQ=60)
           GATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCCAAAGCCCGGAAAATCCgggcttcgcag                                                                                >  SRR4302537.5962019/1‑83 (MQ=60)
           GATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcag                                                                                >  SRR4302537.5086857/1‑83 (MQ=60)
            ATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcagg                                                                               <  SRR4302537.992430/94‑13 (MQ=60)
            ATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcagg                                                                               <  SRR4302537.1881315/94‑13 (MQ=60)
             TTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggt                                                                              <  SRR4302537.816583/94‑14 (MQ=60)
              TTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtc                                                                             <  SRR4302537.1162582/94‑15 (MQ=60)
               TTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtcc                                                                            <  SRR4302537.5357024/94‑16 (MQ=60)
               TTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtcc                                                                            <  SRR4302537.4944839/94‑16 (MQ=60)
                  GCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtccctc                                                                         >  SRR4302537.6060440/1‑76 (MQ=60)
                   CATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtccctca                                                                        >  SRR4302537.3797810/1‑75 (MQ=60)
                   CATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtccctca                                                                        <  SRR4302537.4447320/94‑20 (MQ=60)
                   CATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtccctca                                                                        >  SRR4302537.2478176/1‑75 (MQ=60)
                   CATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtccctca                                                                        >  SRR4302537.4780198/1‑75 (MQ=60)
                   CATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtccctca                                                                        >  SRR4302537.1790775/1‑75 (MQ=60)
                    ATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcaggtccctcaa                                                                       >  SRR4302537.5625619/1‑74 (MQ=60)
                     TGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcatgtccctcaag                                                                      <  SRR4302537.2949409/94‑22 (MQ=60)
                       ATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCgggcttcgcagggcccccaaggg                                                                    >  SRR4302537.3917415/1‑71 (MQ=60)
                          CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAG                                                           >  SRR4302537.5238879/1‑94 (MQ=60)
                          CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAG                                                           <  SRR4302537.3237663/94‑1 (MQ=60)
                          CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGCACATTTATGGCAAGACCCCGGAAAATCCgggcttcccagagacctccaggggag                                                                 >  SRR4302537.3863280/1‑68 (MQ=60)
                            CAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAA                                                         <  SRR4302537.4530409/94‑1 (MQ=60)
                            CAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAA                                                         >  SRR4302537.113041/1‑94 (MQ=60)
                             AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAA                                                        >  SRR4302537.1562/1‑94 (MQ=60)
                             AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAA                                                        >  SRR4302537.3596700/1‑94 (MQ=60)
                               ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAAT                                                      >  SRR4302537.3303848/1‑94 (MQ=60)
                               ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAAC                                                      <  SRR4302537.5336240/94‑1 (MQ=60)
                               ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAAC                                                      >  SRR4302537.5917454/1‑94 (MQ=60)
                               ATGCTAACGTAATTGTCAGTCAGGGAATGGCTGGTAAATATATGGCAAAAACCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAAC                                                      <  SRR4302537.6517435/94‑1 (MQ=57)
                                TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATTTTTGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACT                                                     >  SRR4302537.3517105/1‑94 (MQ=60)
                                  CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTA                                                   >  SRR4302537.1175294/1‑94 (MQ=60)
                                  CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTA                                                   >  SRR4302537.3249558/1‑94 (MQ=60)
                                  CTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTA                                                   >  SRR4302537.4897137/1‑94 (MQ=60)
                                   TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAG                                                  <  SRR4302537.3261838/94‑1 (MQ=60)
                                   TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAG                                                  <  SRR4302537.4008946/94‑1 (MQ=60)
                                   TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAG                                                  <  SRR4302537.3220719/94‑1 (MQ=60)
                                   TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAG                                                  <  SRR4302537.2002019/94‑1 (MQ=60)
                                    AACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGG                                                 <  SRR4302537.3090552/94‑1 (MQ=60)
                                     ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGG                                                <  SRR4302537.1451172/94‑1 (MQ=60)
                                     ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGG                                                >  SRR4302537.4551158/1‑94 (MQ=60)
                                      CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGC                                               >  SRR4302537.4402195/1‑94 (MQ=60)
                                      CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGC                                               <  SRR4302537.4433622/94‑1 (MQ=60)
                                      CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGC                                               >  SRR4302537.4908945/1‑94 (MQ=60)
                                       GTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCC                                              >  SRR4302537.1827304/1‑94 (MQ=60)
                                        TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCT                                             <  SRR4302537.2052406/94‑1 (MQ=60)
                                         AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTC                                            <  SRR4302537.2964981/94‑1 (MQ=60)
                                         AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTC                                            >  SRR4302537.4698762/1‑94 (MQ=60)
                                         AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTC                                            >  SRR4302537.6093385/1‑94 (MQ=60)
                                           TTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTA                                          >  SRR4302537.2454596/1‑94 (MQ=60)
                                             GTCAGTCAGGGAGTGGCTGGTACATATATGGCCAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TAGCAGGCC‑CCTCAAGGGGAGAAAACTTAGGGCCCCTATG                                        >  SRR4302537.5203691/1‑94 (MQ=46)
                                             GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑‑G‑‑CGCTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                        <  SRR4302537.3492016/94‑1 (MQ=60)
                                              TCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGG                                       <  SRR4302537.5960870/94‑1 (MQ=60)
                                               CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGGCCGGCAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGC                                      >  SRR4302537.2150217/1‑94 (MQ=60)
                                               CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                      >  SRR4302537.4692431/1‑94 (MQ=60)
                                                 GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                    <  SRR4302537.345530/94‑1 (MQ=60)
                                                  gcgGGGAGTGGCTGGTACATATAGGGCAAAGGCCCGTAAAATCC‑‑GGGTT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                   <  SRR4302537.3336153/91‑1 (MQ=52)
                                                  TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                   >  SRR4302537.193714/1‑94 (MQ=60)
                                                   CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                  <  SRR4302537.1761293/94‑1 (MQ=60)
                                                   CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                  >  SRR4302537.2690146/1‑94 (MQ=60)
                                                   CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                  >  SRR4302537.2941681/1‑94 (MQ=60)
                                                    AGGGAGTGGGTGGTTCATATATGGCAAAAGCGCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                 <  SRR4302537.3054670/94‑1 (MQ=57)
                                                     GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA                                <  SRR4302537.3707281/94‑1 (MQ=60)
                                                     GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA                                <  SRR4302537.5537196/94‑1 (MQ=60)
                                                       GAGTGGCTGTTACATATATGGCAAAAGCCCGGAAAGTCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                              <  SRR4302537.1489672/94‑1 (MQ=60)
                                                       GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                              <  SRR4302537.4987903/94‑1 (MQ=60)
                                                        AGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGT                             <  SRR4302537.4567577/94‑1 (MQ=60)
                                                         GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                            >  SRR4302537.4555124/1‑94 (MQ=60)
                                                          TGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA                           <  SRR4302537.2015417/94‑1 (MQ=60)
                                                            GCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATT                         <  SRR4302537.6081853/94‑1 (MQ=60)
                                                             CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                        >  SRR4302537.6199208/1‑94 (MQ=60)
                                                             CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                        <  SRR4302537.2306933/94‑1 (MQ=60)
                                                              TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                       >  SRR4302537.1842640/1‑94 (MQ=60)
                                                              TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                       <  SRR4302537.6444247/94‑1 (MQ=60)
                                                              TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                       >  SRR4302537.1298616/1‑94 (MQ=60)
                                                              TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                       <  SRR4302537.5319504/94‑1 (MQ=60)
                                                              TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                       <  SRR4302537.2042930/94‑1 (MQ=60)
                                                              TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                       >  SRR4302537.1878587/1‑94 (MQ=60)
                                                               GTTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                      <  SRR4302537.2330848/94‑1 (MQ=60)
                                                               GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                      <  SRR4302537.3412208/94‑1 (MQ=60)
                                                               GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                      <  SRR4302537.3020090/94‑1 (MQ=60)
                                                               GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                      <  SRR4302537.607512/94‑1 (MQ=60)
                                                                GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                     <  SRR4302537.338708/94‑1 (MQ=60)
                                                                 TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                    <  SRR4302537.1748972/94‑1 (MQ=60)
                                                                 TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                    <  SRR4302537.6438406/94‑1 (MQ=60)
                                                                 TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                    >  SRR4302537.232804/1‑94 (MQ=60)
                                                                 TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                    >  SRR4302537.2652947/1‑94 (MQ=60)
                                                                  ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                   >  SRR4302537.143213/1‑94 (MQ=60)
                                                                  ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                   <  SRR4302537.3614286/94‑1 (MQ=60)
                                                                   CATATATGGCAAAAGCCGGGAAAATCCGGTC‑‑T‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                  <  SRR4302537.4629587/94‑1 (MQ=60)
                                                                   CATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                  <  SRR4302537.2776551/94‑1 (MQ=60)
                                                                   CATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                  <  SRR4302537.5960748/94‑1 (MQ=60)
                                                                   CATATATGGCAAAAGCCCGAAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                  <  SRR4302537.456248/94‑1 (MQ=60)
                                                                    ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                 >  SRR4302537.2346924/1‑94 (MQ=60)
                                                                     TATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAT                >  SRR4302537.1353117/1‑94 (MQ=60)
                                                                      ATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG               >  SRR4302537.2742456/1‑94 (MQ=60)
                                                                      ATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG               >  SRR4302537.1808355/1‑94 (MQ=60)
                                                                      ATATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG               >  SRR4302537.4779783/1‑94 (MQ=60)
                                                                      ATAGGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG               <  SRR4302537.5473977/94‑1 (MQ=60)
                                                                       TATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG              <  SRR4302537.790585/94‑1 (MQ=60)
                                                                       TATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG              <  SRR4302537.780468/94‑1 (MQ=60)
                                                                        ATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT             >  SRR4302537.3498662/1‑94 (MQ=60)
                                                                        ATGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT             <  SRR4302537.3034147/94‑1 (MQ=60)
                                                                         TGGCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT            <  SRR4302537.6133306/94‑1 (MQ=60)
                                                                           GCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT          >  SRR4302537.2775711/1‑94 (MQ=60)
                                                                           GCAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT          <  SRR4302537.3877197/94‑1 (MQ=60)
                                                                            CAAAATCCCGGAAAATCCGGTC‑‑T‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT         <  SRR4302537.6262597/94‑1 (MQ=60)
                                                                            CAAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT         <  SRR4302537.5754362/94‑1 (MQ=60)
                                                                             AAAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT        >  SRR4302537.1764097/1‑94 (MQ=60)
                                                                              AAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT       <  SRR4302537.2619797/94‑1 (MQ=60)
                                                                              AAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT       <  SRR4302537.3220393/94‑1 (MQ=60)
                                                                              AAAGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT       >  SRR4302537.455129/1‑94 (MQ=60)
                                                                                AGCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT     <  SRR4302537.2951207/94‑1 (MQ=60)
                                                                                 GCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT    <  SRR4302537.203123/94‑1 (MQ=60)
                                                                                 GCCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT    >  SRR4302537.273082/1‑94 (MQ=60)
                                                                                  CCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG   <  SRR4302537.4089779/94‑1 (MQ=60)
                                                                                  CCCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG   >  SRR4302537.3540222/1‑94 (MQ=60)
                                                                                   CCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT  >  SRR4302537.6087420/1‑94 (MQ=60)
                                                                                   CCGGAAAATCC‑‑GGGCT‑‑‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT  >  SRR4302537.2794173/1‑94 (MQ=60)
                                                                                             |                                                                                         
TGTCAGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑C‑‑‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT  >  NC_000913/3957454‑3957627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑