Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,255,594 Δ1 bp coding (4/1278 nt) yhaO ← putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,255,5930G.99.7% 1525.8 / ‑3.5 331coding (5/1278 nt)yhaOputative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base . (137/193);  total (138/193)
Fisher's exact test for biased strand distribution p-value = 4.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.98e-01

Only 100 of 371 total aligned reads displayed.

CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTT  >  NC_000913/3255501‑3255682
                                                                                            |                                                                                         
 gcCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAgc                                                                                          <  2:3196917/93‑2 (MQ=255)
 gcCAATCGCCAACCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAgc                                                                                          >  1:4275620/1‑92 (MQ=255)
  ccAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAgca                                                                                         <  1:2774275/93‑3 (MQ=255)
   cAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAgcac                                                                                        <  2:6335742/93‑4 (MQ=255)
     aTCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGa                                                                                     >  1:3796147/1‑93 (MQ=255)
     aTCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGa                                                                                     >  1:7291370/1‑93 (MQ=255)
        gCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGAccc                                                                                  <  2:4935016/93‑1 (MQ=255)
          cATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgc                                                                                >  1:4771217/1‑93 (MQ=255)
           aTCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgcc                                                                               <  2:2626271/93‑1 (MQ=255)
           aTCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgcc                                                                               >  2:4721970/1‑93 (MQ=255)
            tCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgccg                                                                              <  1:4125375/93‑1 (MQ=255)
            tCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACccgccg                                                                              >  1:3986053/1‑93 (MQ=255)
              ccGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCggg                                                                            >  1:5658063/1‑93 (MQ=255)
               cGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCgggg                                                                           >  2:1690284/1‑93 (MQ=255)
                gATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGt                                                                          >  1:4196968/1‑93 (MQ=255)
                 aTACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTc                                                                         >  2:8814510/1‑93 (MQ=255)
                 aTACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTc                                                                         <  1:98967/93‑1 (MQ=255)
                  tACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCg                                                                        <  1:8440275/93‑1 (MQ=255)
                   aCTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGa                                                                       >  2:3452132/1‑93 (MQ=255)
                    cTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGaa                                                                      <  1:2298209/93‑1 (MQ=255)
                    cTCATAATCACCAAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGaa                                                                      >  2:8315164/1‑93 (MQ=255)
                     tCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAg                                                                     >  2:1265932/1‑93 (MQ=255)
                     tCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAg                                                                     >  1:1011968/1‑93 (MQ=255)
                      caaaaTCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAgc                                                                    <  1:5583357/90‑2 (MQ=255)
                      cATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAgc                                                                    >  2:7696897/1‑92 (MQ=255)
                      cATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAgc                                                                    >  1:923740/1‑92 (MQ=255)
                        tAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAgcgt                                                                  <  2:8481003/93‑4 (MQ=255)
                         aaTCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAgcgtc                                                                 <  2:1122040/93‑5 (MQ=255)
                          aTCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCt                                                               <  1:4465776/93‑1 (MQ=255)
                          aTCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCt                                                               >  1:4972923/1‑93 (MQ=255)
                           tCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTg                                                              >  2:1555666/1‑93 (MQ=255)
                            cACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGc                                                             >  1:6250431/1‑93 (MQ=255)
                              cccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCaa                                                           <  1:512913/93‑1 (MQ=255)
                              cccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCaa                                                           >  1:6393656/1‑93 (MQ=255)
                               ccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAt                                                          <  1:7467743/93‑1 (MQ=255)
                               ccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAt                                                          >  1:3489286/1‑93 (MQ=255)
                               ccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAt                                                          <  1:2176275/93‑1 (MQ=255)
                               ccAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAt                                                          <  2:5983733/93‑1 (MQ=255)
                                 cgCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGa                                                        <  2:302018/92‑1 (MQ=255)
                                 aGCCGTTGTCAGTACTCTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACACGCCGGGGTCGAA‑GCGTCTGCAATGa                                                        <  2:5686802/93‑1 (MQ=255)
                                 aGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGa                                                        >  2:7120661/1‑93 (MQ=255)
                                 aGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGa                                                        <  1:7200630/93‑1 (MQ=255)
                                    cGGTTTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGc                                                     <  1:5448681/93‑1 (MQ=255)
                                    cGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGc                                                     >  1:5796397/1‑93 (MQ=255)
                                      gtgtCAGTCCTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCt                                                   <  1:52522/93‑1 (MQ=255)
                                      gtgtCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCt                                                   <  2:8247231/93‑1 (MQ=255)
                                      gtgtCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCt                                                   <  1:695123/93‑1 (MQ=255)
                                       tgtCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCtt                                                  <  1:6729777/93‑1 (MQ=255)
                                        gtCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCttt                                                 >  2:2878372/1‑93 (MQ=255)
                                         tCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTa                                                <  1:1890666/93‑1 (MQ=255)
                                         tCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTa                                                >  1:540322/1‑93 (MQ=255)
                                          cAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAt                                               <  2:4209829/93‑1 (MQ=255)
                                           aGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAtt                                              <  1:1171037/93‑1 (MQ=255)
                                           aGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAtt                                              <  1:2065919/93‑1 (MQ=255)
                                            gTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTc                                             >  1:2804460/1‑93 (MQ=255)
                                              aCTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGa                                           <  2:6739732/93‑1 (MQ=255)
                                               cTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGAt                                          <  2:5169394/93‑1 (MQ=255)
                                               cTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGAt                                          <  2:6164772/93‑1 (MQ=255)
                                                tGTCGAATTTGATCGCTTATCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATg                                         <  2:3384555/93‑1 (MQ=255)
                                                 gTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGc                                        >  2:8646537/1‑93 (MQ=255)
                                                  tCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGCCTGCAATGACGCCTTTATTCGATGCa                                       >  1:8189400/1‑93 (MQ=255)
                                                     aaTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAAtt                                    <  1:8158592/93‑1 (MQ=255)
                                                     aaTTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAAtt                                    >  2:3223208/1‑93 (MQ=255)
                                                          taTCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCAt                               <  1:2957168/92‑1 (MQ=255)
                                                           aTCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATa                              >  1:6088281/1‑93 (MQ=255)
                                                              gCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAtt                           >  1:1310441/1‑93 (MQ=255)
                                                               cTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAttt                          >  1:6630308/1‑93 (MQ=255)
                                                                ttCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtc                         <  2:8100684/93‑1 (MQ=255)
                                                                 tctcGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtct                        <  2:7430735/93‑1 (MQ=255)
                                                                 tctcGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtct                        <  2:6913638/93‑1 (MQ=255)
                                                                 tctcGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtct                        <  2:6423785/93‑1 (MQ=255)
                                                                 tctcGCCACGCTCTCCCCCTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTACTCGATGCAATTTCCATAATTtct                        <  1:7764110/93‑1 (MQ=255)
                                                                  ctcGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTtctc                       <  1:8724209/93‑1 (MQ=255)
                                                                   tcGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCg                      >  1:3542683/1‑93 (MQ=255)
                                                                   tcGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCg                      >  2:6821873/1‑93 (MQ=255)
                                                                     gCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCt                    <  1:4419292/93‑1 (MQ=255)
                                                                      ccACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTc                   >  1:2717516/1‑93 (MQ=255)
                                                                       cACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCa                  >  1:4823727/1‑93 (MQ=255)
                                                                        aCTCGCTCTCACTCATTCCAGG‑ACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCaa                 >  1:1524218/1‑93 (MQ=255)
                                                                        aCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCaa                 >  2:2044259/1‑93 (MQ=255)
                                                                        aCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCaa                 >  1:5502935/1‑93 (MQ=255)
                                                                         cTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAat                >  1:8326787/1‑93 (MQ=255)
                                                                         cTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAat                >  2:1807571/1‑93 (MQ=255)
                                                                         cTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAat                <  2:395793/93‑1 (MQ=255)
                                                                          tCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAata               >  1:2513612/1‑93 (MQ=255)
                                                                          tCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGGCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAata               >  1:7606424/1‑93 (MQ=255)
                                                                          ccGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAata               <  2:7339216/92‑1 (MQ=255)
                                                                           cGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAatat              <  2:2200872/93‑1 (MQ=255)
                                                                             ctctCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAttt            >  1:3337904/1‑93 (MQ=255)
                                                                              tctcACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAtttt           <  1:322768/93‑1 (MQ=255)
                                                                               ctcactcaTTCCA‑GCGCGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTg          <  2:1944140/93‑1 (MQ=255)
                                                                               ctcactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGAAATGACGCCTTTATTCGATGCAATTTCCAAAATTTCTCGCTCAATATTTTg          <  2:7815148/93‑1 (MQ=255)
                                                                                tcactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGt         <  2:4516496/93‑1 (MQ=255)
                                                                                 cactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTa        <  2:4886846/93‑1 (MQ=255)
                                                                                 cactcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTa        <  1:1791316/93‑1 (MQ=255)
                                                                                  actcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAg       <  2:5368290/93‑1 (MQ=255)
                                                                                   ctcaTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAgg      <  1:7811221/93‑1 (MQ=255)
                                                                                    tcaTTCCA‑GCACGACCCGCCGGGGTCG‑ACGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCCTAATTTCTCGCTCAATAATTTGTAgtg     >  1:686141/1‑91 (MQ=255)
                                                                                     caTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGc    <  2:3759194/93‑1 (MQ=255)
                                                                                      aTTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCt   <  1:3053459/93‑1 (MQ=255)
                                                                                            |                                                                                         
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTT  >  NC_000913/3255501‑3255682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 217 total aligned reads displayed.
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTA  >  NC_000913/3255501‑3255686
                                                                                             |                                                                                            
CGCCAATCGGCAGCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGC                                                                                              <  SRR4302541.4045236/94‑1 (MQ=60)
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGC                                                                                              >  SRR4302541.4908588/1‑94 (MQ=60)
  CCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCAC                                                                                           >  SRR4302541.192954/1‑94 (MQ=60)
  CCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCAC                                                                                           <  SRR4302541.440776/94‑1 (MQ=60)
  CCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCAC                                                                                           >  SRR4302541.3558012/1‑94 (MQ=60)
  CCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCAC                                                                                           <  SRR4302541.2802218/94‑1 (MQ=60)
  CCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCAC                                                                                           >  SRR4302541.4488491/1‑94 (MQ=60)
  CCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCAC                                                                                           <  SRR4302541.2802219/94‑1 (MQ=60)
   CAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACG                                                                                          >  SRR4302541.1295885/1‑94 (MQ=60)
   CAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACG                                                                                          >  SRR4302541.4970443/1‑94 (MQ=60)
   CAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACG                                                                                          >  SRR4302541.5588131/1‑94 (MQ=60)
    AATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGA                                                                                         <  SRR4302541.1489570/94‑1 (MQ=60)
    AATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGA                                                                                         >  SRR4302541.3834343/1‑94 (MQ=60)
    AATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGA                                                                                         >  SRR4302541.5220864/1‑94 (MQ=60)
    AATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGA                                                                                         >  SRR4302541.7369199/1‑94 (MQ=60)
      TCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACC                                                                                       <  SRR4302541.4436070/94‑1 (MQ=60)
       CGCCATCCCGATACTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCC                                                                                      <  SRR4302541.906401/94‑1 (MQ=60)
       CGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCC                                                                                      <  SRR4302541.906402/94‑1 (MQ=60)
         CCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGC                                                                                    >  SRR4302541.4819935/1‑94 (MQ=60)
          CATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCC                                                                                   <  SRR4302541.748777/94‑1 (MQ=60)
          CATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCC                                                                                   >  SRR4302541.8428267/1‑94 (MQ=60)
          CATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCC                                                                                   >  SRR4302541.8630034/1‑94 (MQ=60)
          CATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCC                                                                                   <  SRR4302541.7852249/94‑1 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGCATTTGATCGCTTCGCGCCACTCGCTCTCACTCATTCCA‑GCACGCCCCGCCG                                                                                  >  SRR4302541.5532522/1‑94 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCG                                                                                  >  SRR4302541.5532523/1‑94 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCG                                                                                  >  SRR4302541.4025549/1‑94 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCG                                                                                  >  SRR4302541.296709/1‑94 (MQ=60)
           ATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCG                                                                                  <  SRR4302541.1480174/94‑1 (MQ=60)
            TCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGG                                                                                 <  SRR4302541.4166125/94‑1 (MQ=60)
             CCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGG                                                                                >  SRR4302541.1810707/1‑94 (MQ=60)
             CCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGG                                                                                >  SRR4302541.5715847/1‑94 (MQ=60)
               CGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGT                                                                              >  SRR4302541.4238655/1‑94 (MQ=60)
               CGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGT                                                                              >  SRR4302541.4855767/1‑94 (MQ=60)
               CGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGT                                                                              <  SRR4302541.3156016/94‑1 (MQ=60)
                GATACTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTC                                                                             <  SRR4302541.1843204/94‑1 (MQ=60)
                GATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTC                                                                             <  SRR4302541.210397/94‑1 (MQ=60)
                GATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTC                                                                             >  SRR4302541.3613269/1‑94 (MQ=60)
                GATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTC                                                                             >  SRR4302541.4283639/1‑94 (MQ=60)
                GATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTC                                                                             <  SRR4302541.7183019/94‑1 (MQ=60)
                  TACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGA                                                                           >  SRR4302541.1934589/1‑94 (MQ=60)
                  TACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGA                                                                           <  SRR4302541.8531435/94‑1 (MQ=60)
                   ACTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA                                                                          <  SRR4302541.2290372/94‑1 (MQ=60)
                   ACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA                                                                          <  SRR4302541.2998440/94‑1 (MQ=60)
                    CTCATAATCCCCCAGCCGGTGTCAGTTATGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAG                                                                         <  SRR4302541.6746455/94‑1 (MQ=60)
                    CTCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAG                                                                         <  SRR4302541.2320493/94‑1 (MQ=60)
                    CTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAG                                                                         >  SRR4302541.1021333/1‑94 (MQ=60)
                    CTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAG                                                                         <  SRR4302541.274151/94‑1 (MQ=60)
                     TCATAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAGC                                                                        <  SRR4302541.3901329/94‑1 (MQ=60)
                     TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGAGCCGCCGGGGTCGAAGC                                                                        >  SRR4302541.7473500/1‑94 (MQ=60)
                     TCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAGC                                                                        >  SRR4302541.932407/1‑94 (MQ=60)
                      CATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAGcg                                                                       <  SRR4302541.8048017/94‑3 (MQ=60)
                      CAAAATCCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAAGcg                                                                       <  SRR4302541.5640514/94‑3 (MQ=60)
                       ATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGT                                                                     >  SRR4302541.110705/1‑94 (MQ=60)
                         AATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCT                                                                   <  SRR4302541.2923237/94‑1 (MQ=60)
                         AATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCT                                                                   >  SRR4302541.5023879/1‑94 (MQ=60)
                          ATCCCCCCGCCGGTTTCCGTACTGGCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTG                                                                  <  SRR4302541.4510752/94‑1 (MQ=60)
                          ATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTG                                                                  <  SRR4302541.4510753/94‑1 (MQ=60)
                           TCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGC                                                                 >  SRR4302541.6314285/1‑94 (MQ=60)
                            CCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCA                                                                <  SRR4302541.7237993/94‑1 (MQ=60)
                            CCCCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCA                                                                <  SRR4302541.6861182/94‑1 (MQ=60)
                            CACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGCCCCGCCGGGGCCGAA‑GCGTCTGCA                                                                >  SRR4302541.6140361/1‑94 (MQ=60)
                             CCCCAGCCGGTGTCCGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCCCGACCCGCCGGGGTCGAA‑GCGTCTGCAA                                                               <  SRR4302541.617307/94‑1 (MQ=60)
                             ACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAA                                                               >  SRR4302541.6458921/1‑94 (MQ=60)
                              CCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCGCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAT                                                              <  SRR4302541.2437250/94‑1 (MQ=60)
                              CCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAT                                                              <  SRR4302541.517708/94‑1 (MQ=60)
                              CCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAT                                                              <  SRR4302541.364141/94‑1 (MQ=60)
                              CCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAT                                                              >  SRR4302541.3524230/1‑94 (MQ=60)
                              CCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAAT                                                              <  SRR4302541.4627884/94‑1 (MQ=60)
                               CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                             <  SRR4302541.7547579/94‑1 (MQ=60)
                               CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                             <  SRR4302541.4309305/94‑1 (MQ=60)
                               CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                             <  SRR4302541.7864709/94‑1 (MQ=60)
                               CCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                             <  SRR4302541.2197302/94‑1 (MQ=60)
                               CCAGCCGCTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCTCTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                             <  SRR4302541.7864708/94‑1 (MQ=60)
                               CAAGCCGGTGTCAGTCATGTCGAATTTGAGCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATG                                                             <  SRR4302541.5194726/94‑1 (MQ=60)
                                CAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGA                                                            >  SRR4302541.942910/1‑94 (MQ=60)
                                CAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGA                                                            >  SRR4302541.1986258/1‑94 (MQ=60)
                                 AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAC                                                           <  SRR4302541.8705601/94‑1 (MQ=60)
                                 AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAC                                                           <  SRR4302541.1120754/94‑1 (MQ=60)
                                 AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAC                                                           <  SRR4302541.5675170/94‑1 (MQ=60)
                                 AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAC                                                           <  SRR4302541.2402631/94‑1 (MQ=60)
                                 AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAC                                                           <  SRR4302541.7277456/94‑1 (MQ=60)
                                 AGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGAC                                                           >  SRR4302541.3296154/1‑94 (MQ=60)
                                  GCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACG                                                          >  SRR4302541.4161857/1‑94 (MQ=60)
                                   CCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGC                                                         >  SRR4302541.5855285/1‑94 (MQ=60)
                                    CGGTTTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCC                                                        <  SRR4302541.5504590/94‑1 (MQ=60)
                                     GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCT                                                       >  SRR4302541.8346053/1‑94 (MQ=60)
                                     GGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCT                                                       <  SRR4302541.3519664/94‑1 (MQ=60)
                                      GTGTCAGTCCTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTT                                                      <  SRR4302541.52933/94‑1 (MQ=60)
                                      GTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGAGACGAA‑GCGTCTGCAATGACGCCTT                                                      >  SRR4302541.3865923/1‑94 (MQ=60)
                                       TGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTT                                                     <  SRR4302541.2312042/94‑1 (MQ=60)
                                       TGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTT                                                     <  SRR4302541.6801606/94‑1 (MQ=60)
                                       TGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTT                                                     <  SRR4302541.558809/94‑1 (MQ=60)
                                        GTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTA                                                    >  SRR4302541.545401/1‑94 (MQ=60)
                                         TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAT                                                   >  SRR4302541.5065781/1‑94 (MQ=60)
                                         TCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAT                                                   <  SRR4302541.1908822/94‑1 (MQ=60)
                                         TCAGTACTGTCGAATGTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTAT                                                   <  SRR4302541.1814783/94‑1 (MQ=60)
                                          CAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCCCTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATT                                                  <  SRR4302541.2793678/94‑1 (MQ=60)
                                          CAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATT                                                  <  SRR4302541.6449232/94‑1 (MQ=60)
                                           ATTACTGTCGAATTTGATCGCTTCTCGCCACTCCCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                 <  SRR4302541.8233833/94‑1 (MQ=60)
                                           AGTTCTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                 <  SRR4302541.149154/94‑1 (MQ=60)
                                           AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                 <  SRR4302541.1182321/94‑1 (MQ=60)
                                           AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                 >  SRR4302541.2832822/1‑94 (MQ=60)
                                           AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                 >  SRR4302541.7811027/1‑94 (MQ=60)
                                           AGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTC                                                 <  SRR4302541.2085874/94‑1 (MQ=60)
                                            GTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCG                                                <  SRR4302541.8272660/94‑1 (MQ=60)
                                              ACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGAT                                              <  SRR4302541.166193/94‑1 (MQ=60)
                                              ACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGAT                                              >  SRR4302541.4272079/1‑94 (MQ=60)
                                               CTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATG                                             <  SRR4302541.1265542/94‑1 (MQ=60)
                                               CTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATG                                             >  SRR4302541.6810054/1‑94 (MQ=60)
                                                TGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGC                                            >  SRR4302541.4821680/1‑94 (MQ=60)
                                                 GTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCA                                           >  SRR4302541.7351625/1‑94 (MQ=60)
                                                 GTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGCCTGCAATGACGCCTTTATTCGATGCA                                           >  SRR4302541.8278793/1‑94 (MQ=60)
                                                   CGAATTTGATCCCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAAT                                         <  SRR4302541.6560901/94‑1 (MQ=60)
                                                    GAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATT                                        >  SRR4302541.3962206/1‑94 (MQ=60)
                                                    GAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATT                                        >  SRR4302541.7525891/1‑94 (MQ=60)
                                                    GAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATT                                        >  SRR4302541.8429175/1‑94 (MQ=60)
                                                    GAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATT                                        >  SRR4302541.574479/1‑94 (MQ=60)
                                                     AATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTT                                       <  SRR4302541.8247743/94‑1 (MQ=60)
                                                     AATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTT                                       >  SRR4302541.5145927/1‑94 (MQ=60)
                                                      ATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTC                                      >  SRR4302541.7658738/1‑94 (MQ=60)
                                                      ATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTC                                      >  SRR4302541.7658737/1‑94 (MQ=60)
                                                      ATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTC                                      <  SRR4302541.6728885/94‑1 (MQ=60)
                                                       TTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCC                                     <  SRR4302541.5757761/94‑1 (MQ=60)
                                                        TTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGCCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCA                                    <  SRR4302541.4669286/94‑1 (MQ=60)
                                                        TTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCA                                    <  SRR4302541.6606438/94‑1 (MQ=60)
                                                        TTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCA                                    <  SRR4302541.5090751/94‑1 (MQ=60)
                                                          TATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATA                                  <  SRR4302541.2986902/94‑1 (MQ=60)
                                                          GATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATA                                  <  SRR4302541.7764992/94‑1 (MQ=60)
                                                          GATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATA                                  >  SRR4302541.6150432/1‑94 (MQ=60)
                                                          GATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTAGATGCAATTTCCATA                                  >  SRR4302541.3277591/1‑94 (MQ=60)
                                                          GATCGCTTCTCGCCAATCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATA                                  >  SRR4302541.3277590/1‑94 (MQ=60)
                                                           ATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAA                                 >  SRR4302541.6192433/1‑94 (MQ=60)
                                                           ATCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAA                                 <  SRR4302541.731669/94‑1 (MQ=60)
                                                            TCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAT                                <  SRR4302541.3570966/94‑1 (MQ=60)
                                                            TCGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAAT                                <  SRR4302541.3673574/94‑1 (MQ=60)
                                                             CGCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATT                               >  SRR4302541.1323343/1‑94 (MQ=60)
                                                              GCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTT                              >  SRR4302541.4368576/1‑94 (MQ=60)
                                                              GCTTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTT                              >  SRR4302541.6698287/1‑94 (MQ=60)
                                                                TTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATCATTTCT                            >  SRR4302541.6335528/1‑94 (MQ=60)
                                                                TTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                            <  SRR4302541.28164/94‑1 (MQ=60)
                                                                TTCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCT                            <  SRR4302541.4213002/94‑1 (MQ=60)
                                                                 TCTCGCCCCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTC                           <  SRR4302541.6751006/94‑1 (MQ=60)
                                                                 TCTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTC                           <  SRR4302541.418930/94‑1 (MQ=60)
                                                                 TCTCGCCACGCTCTCCCCCTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTACTCGATGCAATTTCCATAATTTCTC                           <  SRR4302541.7846709/94‑1 (MQ=60)
                                                                  CTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCG                          >  SRR4302541.8296569/1‑94 (MQ=60)
                                                                  CTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCG                          <  SRR4302541.547255/94‑1 (MQ=60)
                                                                  CTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCG                          >  SRR4302541.3578434/1‑94 (MQ=60)
                                                                  CTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCG                          <  SRR4302541.8817491/94‑1 (MQ=60)
                                                                  CTCGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCG                          <  SRR4302541.2961367/94‑1 (MQ=60)
                                                                    CGCCCCTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                        <  SRR4302541.4627226/94‑1 (MQ=60)
                                                                    CGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                        >  SRR4302541.2563496/1‑94 (MQ=60)
                                                                    CGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                        <  SRR4302541.2230961/94‑1 (MQ=60)
                                                                    CGCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                        <  SRR4302541.983574/94‑1 (MQ=60)
                                                                    CGCCACTCCCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCT                        <  SRR4302541.8254456/94‑1 (MQ=60)
                                                                     GCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTC                       <  SRR4302541.4463637/94‑1 (MQ=60)
                                                                     GCCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTC                       >  SRR4302541.2744621/1‑94 (MQ=60)
                                                                      CCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                      <  SRR4302541.3113198/94‑1 (MQ=60)
                                                                      CCACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCA                      >  SRR4302541.4872895/1‑94 (MQ=60)
                                                                       CACTCGCTCTCACTCATTCCAGG‑ACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAA                     >  SRR4302541.1539449/1‑94 (MQ=60)
                                                                       CACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAA                     <  SRR4302541.5356366/94‑1 (MQ=60)
                                                                       CACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAA                     >  SRR4302541.7060032/1‑94 (MQ=60)
                                                                       CACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAA                     <  SRR4302541.6936759/94‑1 (MQ=60)
                                                                       CACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAA                     >  SRR4302541.419755/1‑94 (MQ=60)
                                                                       CACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAA                     >  SRR4302541.5559303/1‑94 (MQ=60)
                                                                        ACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                    >  SRR4302541.8417240/1‑94 (MQ=60)
                                                                        ACTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAAT                    >  SRR4302541.5685361/1‑94 (MQ=60)
                                                                         CTCGCTCTCACTCATTCCA‑GCACGACCCGGCGGGGTCGAA‑GCGTCTGCAATGAGGCCTTTATTCTATGCAATTTCCATAATTTTTCGCTCAATT                   >  SRR4302541.7281554/1‑94 (MQ=60)
                                                                         CTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                   >  SRR4302541.7687699/1‑94 (MQ=60)
                                                                         CTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                   >  SRR4302541.6347499/1‑94 (MQ=60)
                                                                         CTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                   >  SRR4302541.2538924/1‑94 (MQ=60)
                                                                         CTCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGGCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATA                   >  SRR4302541.7687698/1‑94 (MQ=60)
                                                                          TCGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATAT                  >  SRR4302541.2368068/1‑94 (MQ=60)
                                                                           CGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATT                 <  SRR4302541.2826438/94‑1 (MQ=60)
                                                                           CGCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATT                 >  SRR4302541.5498475/1‑94 (MQ=60)
                                                                            GCTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTT                >  SRR4302541.3371301/1‑94 (MQ=60)
                                                                             CTCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGGCTGCAATGACGCCTTTATTCGATGCAAGTTCCATAATTTCTCGCTCAATATTTT               >  SRR4302541.1278203/1‑94 (MQ=60)
                                                                              TCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG              <  SRR4302541.325642/94‑1 (MQ=60)
                                                                              TCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTG              <  SRR4302541.5544322/94‑1 (MQ=60)
                                                                              TCTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTCCCATAATTTCTCGCTCAATATTTTG              >  SRR4302541.5802883/1‑94 (MQ=60)
                                                                               CTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT             <  SRR4302541.5359046/94‑1 (MQ=60)
                                                                               CTCACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGT             >  SRR4302541.5406919/1‑94 (MQ=60)
                                                                                 CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG           <  SRR4302541.1808715/94‑1 (MQ=60)
                                                                                 CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG           >  SRR4302541.929024/1‑94 (MQ=60)
                                                                                 CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG           >  SRR4302541.6132789/1‑94 (MQ=60)
                                                                                 CACTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAG           <  SRR4302541.3096973/94‑1 (MQ=60)
                                                                                  CCTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGG          <  SRR4302541.8611797/94‑1 (MQ=60)
                                                                                   CTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGG         >  SRR4302541.692603/1‑94 (MQ=60)
                                                                                   CTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGG         >  SRR4302541.8250185/1‑94 (MQ=60)
                                                                                   CTCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGG         <  SRR4302541.7895648/94‑1 (MQ=60)
                                                                                   CTCATTCCA‑GCACGACCCGCCGGGGTCG‑ACGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCCTAATTTCTCGCTCAATAATTTGTAGTG         >  SRR4302541.692602/1‑94 (MQ=60)
                                                                                    TCATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGC        <  SRR4302541.6940513/94‑1 (MQ=60)
                                                                                     CATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCT       >  SRR4302541.5616809/1‑94 (MQ=60)
                                                                                      cataccaGCACGGCCCGCCGAGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCT       <  SRR4302541.8349273/87‑1 (MQ=60)
                                                                                      ATTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTT      <  SRR4302541.3084377/94‑1 (MQ=60)
                                                                                       TTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTA     <  SRR4302541.3384411/94‑1 (MQ=60)
                                                                                       TTCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTA     <  SRR4302541.2576649/94‑1 (MQ=60)
                                                                                        TCCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTAT    <  SRR4302541.5889984/94‑1 (MQ=60)
                                                                                         CCA‑GCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATT   >  SRR4302541.3351268/1‑94 (MQ=60)
                                                                                           caGCACGCCCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTA  <  SRR4302541.1889438/92‑1 (MQ=60)
                                                                                           caGCACGACCCGCCGGGGTCGAA‑GCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTA  <  SRR4302541.3616208/92‑1 (MQ=60)
                                                                                             |                                                                                            
CGCCAATCGCCATCCCGATACTCATAATCACCCAGCCGGTGTCAGTACTGTCGAATTTGATCGCTTCTCGCCACTCGCTCTCACTCATTCCAGGCACGACCCGCCGGGGTCGAAGGCGTCTGCAATGACGCCTTTATTCGATGCAATTTCCATAATTTCTCGCTCAATATTTTGTAGGGCTTATTA  >  NC_000913/3255501‑3255686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑