Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,430,453	+C	coding (745/747 nt)	smf ←	putative Rossmann‑fold nucleotide‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,430,453	1	.	C	100.0%	837.9 / NA	243	P249A (CCT→GCT)	smf	putative Rossmann‑fold nucleotide‑binding protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (146/97); total (146/97)

Only 100 of 273 total aligned reads displayed.

GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT  >  NC_000913/3430361‑3430539

gAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAgg                                                                                         <  1:1580019/93‑1 (MQ=255)

gAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAgg                                                                                         >  1:2819833/1‑93 (MQ=255)

gAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAgg                                                                                         <  1:2372872/93‑1 (MQ=255)

 aaTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAggc                                                                                        >  1:4245541/1‑92 (MQ=255)

 aaTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAggc                                                                                        <  1:5618755/93‑2 (MQ=255)

  aTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAggca                                                                                       <  2:228268/93‑3 (MQ=255)

   tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTggcaagg‑caa                                                                                     >  2:5442854/1‑93 (MQ=255)

   tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGACCTTCGCTTCCCGGATTCCCTATTGGACCTggcaagg‑caa                                                                                     >  2:8308458/1‑93 (MQ=255)

      cttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑caaaaa                                                                                  >  1:4647249/1‑92 (MQ=255)

       ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑caaaaac                                                                                 >  2:8127376/1‑91 (MQ=255)

        tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACt                                                                                 <  2:642754/93‑1 (MQ=255)

        tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACt                                                                                 >  2:7207339/1‑93 (MQ=255)

          cGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtc                                                                               <  1:3651995/93‑1 (MQ=255)

           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                              <  2:3242892/93‑1 (MQ=255)

           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtct                                                                              <  1:968380/93‑1 (MQ=255)

            gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtctc                                                                             <  2:1501713/93‑1 (MQ=255)

            gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtctc                                                                             <  2:4018424/93‑1 (MQ=255)

            gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTtctc                                                                             >  1:5817879/1‑93 (MQ=255)

             ttCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCg                                                                            <  1:6367418/93‑1 (MQ=255)

              tCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGc                                                                           <  1:2585044/93‑1 (MQ=255)

                 gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGcccc                                                                        >  2:2523606/1‑93 (MQ=255)

                 gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCAATTGGACCTGGCAAGGCAACAACTTCTCGcccc                                                                        >  1:4330118/1‑93 (MQ=255)

                 gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGCCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGcccc                                                                        <  2:7250290/93‑1 (MQ=255)

                  tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCt                                                                       >  1:3228200/1‑93 (MQ=255)

                  tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCt                                                                       <  1:713120/93‑1 (MQ=255)

                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     >  2:1208065/1‑93 (MQ=255)

                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     >  1:5352830/1‑93 (MQ=255)

                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGc                                                                     >  1:4340015/1‑93 (MQ=255)

                     caAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCt                                                                    >  1:212358/1‑93 (MQ=255)

                     caAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCt                                                                    >  2:6464558/1‑93 (MQ=255)

                       aGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCa                                                                  >  1:7540732/1‑93 (MQ=255)

                       aGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCa                                                                  >  2:1568861/1‑93 (MQ=255)

                       aGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCa                                                                  <  2:6550460/93‑1 (MQ=255)

                         aaTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAg                                                                >  2:8683511/1‑93 (MQ=255)

                          aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgc                                                               >  1:6907636/1‑93 (MQ=255)

                           tCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAgcg                                                              >  1:7407655/1‑93 (MQ=255)

                             gCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGca                                                            <  2:312331/93‑1 (MQ=255)

                               aCCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGcaca                                                          <  1:5748138/93‑1 (MQ=255)

                                ccTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACaa                                                         >  2:2096569/1‑93 (MQ=255)

                                ccTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACaa                                                         >  1:1089500/1‑93 (MQ=255)

                                ccTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACaa                                                         <  1:2750213/93‑1 (MQ=255)

                                  ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg                                                       <  1:2981370/93‑1 (MQ=255)

                                    gTTTTATTAACCAGTGAGGGCCTTCGCTTCCCGGATTCCCTATTGGACGTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTg                                                     <  1:1557337/93‑1 (MQ=255)

                                    gTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTg                                                     <  2:4742678/93‑1 (MQ=255)

                                     ttttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGc                                                    <  2:3525534/93‑1 (MQ=255)

                                       ttattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTg                                                  <  2:7809822/93‑1 (MQ=255)

                                         attaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTc                                                <  2:2400528/93‑1 (MQ=255)

                                          ttaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                               >  2:2757783/1‑93 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             >  2:6857481/1‑93 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             >  2:1673814/1‑93 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             >  2:7662356/1‑93 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             <  1:5969780/93‑1 (MQ=255)

                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             <  2:5829330/93‑1 (MQ=255)

                                             aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa                                            <  2:437782/93‑1 (MQ=255)

                                               cAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGc                                          >  2:631574/1‑93 (MQ=255)

                                                  tGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGaa                                       <  1:1040133/93‑1 (MQ=255)

                                                   gAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAc                                      <  2:526548/93‑1 (MQ=255)

                                                    aGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAcc                                     <  1:5933102/93‑1 (MQ=255)

                                                      gCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCAc                                   <  1:3576586/93‑1 (MQ=255)

                                                       cccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACt                                  <  1:1999494/93‑1 (MQ=255)

                                                        ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTa                                 >  2:7925222/1‑93 (MQ=255)

                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                >  1:4905993/1‑93 (MQ=255)

                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                <  2:428521/93‑1 (MQ=255)

                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                <  2:3758212/93‑1 (MQ=255)

                                                          ttCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACg                               >  2:1104705/1‑93 (MQ=255)

                                                          ttCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACg                               >  1:5561260/1‑93 (MQ=255)

                                                          ttCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACg                               >  1:6502875/1‑93 (MQ=255)

                                                           tCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGc                              <  2:2892129/93‑1 (MQ=255)

                                                              cTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           <  2:91869/93‑1 (MQ=255)

                                                              cTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           <  1:7861777/93‑1 (MQ=255)

                                                               ttCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg                          <  1:8793814/93‑1 (MQ=255)

                                                                tCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGc                         >  1:4848301/1‑93 (MQ=255)

                                                                 cccGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc                        >  2:6972133/1‑93 (MQ=255)

                                                                   cGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                      >  1:3132684/1‑93 (MQ=255)

                                                                   cGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                      <  1:5073686/93‑1 (MQ=255)

                                                                    ggATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCt                     >  2:5649051/1‑93 (MQ=255)

                                                                     gATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCtt                    <  1:7628814/93‑1 (MQ=255)

                                                                       ttCCCTATTGGACCTGGCAAGGCAACAACTTCTCGCCCCTGCTCACGCGCACAACGTGCTGACACCAGCGAACCACTACGCACAGCTGATTcc                  >  2:4639161/1‑93 (MQ=255)

                                                                       ttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcc                  <  1:1416987/93‑1 (MQ=255)

                                                                       ttCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcc                  <  1:6977354/93‑1 (MQ=255)

                                                                        tCCCTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTcca                 <  1:817462/93‑1 (MQ=255)

                                                                         cccTATTGGACCTGTGAAGGCACAAACTTCGCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccac                <  1:2955624/93‑1 (MQ=255)

                                                                         cccTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccac                >  1:8106890/1‑93 (MQ=255)

                                                                         cccTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccac                >  1:3416295/1‑93 (MQ=255)

                                                                          ccTATTGGACCTGGCAAGGCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacc               <  1:8620970/93‑1 (MQ=255)

                                                                          ccTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacc               <  1:3686545/93‑1 (MQ=255)

                                                                          ccTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacc               <  2:4319032/93‑1 (MQ=255)

                                                                           cTATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacca              >  1:3967453/1‑93 (MQ=255)

                                                                            tATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACATCGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccag             >  2:5968275/1‑92 (MQ=255)

                                                                            tATTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccac             <  1:2271799/93‑1 (MQ=255)

                                                                             aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACATCGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacc            <  1:6078203/93‑1 (MQ=255)

                                                                             aTTGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacc            >  1:8664786/1‑93 (MQ=255)

                                                                              ttGGACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca           <  1:6415568/93‑1 (MQ=255)

                                                                                ggACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt         <  2:3687976/93‑1 (MQ=255)

                                                                                ggACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt         >  1:8039784/1‑93 (MQ=255)

                                                                                ggACCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt         >  2:1084390/1‑93 (MQ=255)

                                                                                  aCCTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTac       <  2:8272287/93‑1 (MQ=255)

                                                                                   ccTGGCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca      <  2:1835752/93‑1 (MQ=255)

                                                                                      ggcaaggcaaAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCt   <  1:8477660/93‑1 (MQ=255)

                                                                                       gCAAGGCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCtt  >  1:622158/1‑93 (MQ=255)

GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT  >  NC_000913/3430361‑3430539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑AAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  >  NC_000913/3430360‑3430546

AGAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG                                                                                                 <  SRR4302541.5154290/94‑1 (MQ=60)

AGAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG                                                                                                 >  SRR4302541.2848291/1‑94 (MQ=60)

 GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑C                                                                                               >  SRR4302541.4287938/1‑94 (MQ=60)

 GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑C                                                                                               <  SRR4302541.962653/94‑1 (MQ=60)

 GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑C                                                                                               <  SRR4302541.2396039/94‑1 (MQ=60)

 GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑C                                                                                               <  SRR4302541.1595804/94‑1 (MQ=60)

  AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CA                                                                                              <  SRR4302541.5676253/94‑1 (MQ=60)

  AATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CA                                                                                              >  SRR4302541.3647455/1‑94 (MQ=60)

   ATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAA                                                                                             >  SRR4302541.6487799/1‑94 (MQ=60)

   ATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAA                                                                                             >  SRR4302541.8000603/1‑94 (MQ=60)

    TTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAAA                                                                                            <  SRR4302541.3396132/94‑1 (MQ=60)

    TTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑CAAA                                                                                            >  SRR4302541.8111393/1‑94 (MQ=60)

      TCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAA                                                                                           >  SRR4302541.4694571/1‑94 (MQ=60)

       CTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAAC                                                                                          >  SRR4302541.6311190/1‑94 (MQ=60)

        TTCCGCTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACT                                                                                         <  SRR4302541.5412279/94‑1 (MQ=60)

         TCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAACACTT                                                                                        >  SRR4302541.5777323/1‑94 (MQ=60)

         TCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTT                                                                                        >  SRR4302541.5075064/1‑94 (MQ=60)

          CCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTC                                                                                       >  SRR4302541.2782344/1‑94 (MQ=60)

           CGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCT                                                                                      <  SRR4302541.3689047/94‑1 (MQ=60)

            GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                     <  SRR4302541.977473/94‑1 (MQ=60)

            GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                     >  SRR4302541.4526418/1‑94 (MQ=60)

            GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                     >  SRR4302541.5877000/1‑94 (MQ=60)

            GGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTC                                                                                     <  SRR4302541.1530219/94‑1 (MQ=60)

             GTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG                                                                                    <  SRR4302541.8693947/94‑1 (MQ=60)

             GTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG                                                                                    >  SRR4302541.8842397/1‑94 (MQ=60)

              TTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑C                                                                                  <  SRR4302541.6432517/94‑1 (MQ=60)

               TCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CC                                                                                 <  SRR4302541.2610947/94‑1 (MQ=60)

                 CGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCAATTGGACCTGGCAAGGCAACAACTTCTCG‑CCCC                                                                               >  SRR4302541.4373350/1‑94 (MQ=60)

                  GTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCT                                                                              >  SRR4302541.3260796/1‑94 (MQ=60)

                  GTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCT                                                                              <  SRR4302541.4395059/94‑1 (MQ=60)

                  GTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCT                                                                              >  SRR4302541.2763278/1‑94 (MQ=60)

                   TCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTG                                                                             >  SRR4302541.3204157/1‑94 (MQ=60)

                   TCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTG                                                                             <  SRR4302541.719846/94‑1 (MQ=60)

                    CACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGC                                                                            >  SRR4302541.4383352/1‑94 (MQ=60)

                    CACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGC                                                                            >  SRR4302541.5407830/1‑94 (MQ=60)

                    CACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGC                                                                            >  SRR4302541.6468685/1‑94 (MQ=60)

                     ACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCT                                                                           >  SRR4302541.213984/1‑94 (MQ=60)

                       AAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCA                                                                         >  SRR4302541.7621330/1‑94 (MQ=60)

                        AGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAAATTCTCG‑CCCCTGCTCAA                                                                        >  SRR4302541.269382/1‑94 (MQ=60)

                         GAATCGCACCTTGTTTTCTTAAACAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACATGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAG                                                                       <  SRR4302541.7929820/94‑1 (MQ=60)

                         GAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAG                                                                       <  SRR4302541.5074666/94‑1 (MQ=60)

                          AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGC                                                                      >  SRR4302541.6981349/1‑94 (MQ=60)

                          AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGC                                                                      >  SRR4302541.2115872/1‑94 (MQ=60)

                          AATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGC                                                                      >  SRR4302541.1283314/1‑94 (MQ=60)

                           ATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCG                                                                     <  SRR4302541.3743893/94‑1 (MQ=60)

                           ATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCG                                                                     <  SRR4302541.2587474/94‑1 (MQ=60)

                           ATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCG                                                                     >  SRR4302541.7486886/1‑94 (MQ=60)

                           ATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCG                                                                     <  SRR4302541.5717331/94‑1 (MQ=60)

                              GCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCAC                                                                  >  SRR4302541.7201766/1‑94 (MQ=60)

                              GCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCAC                                                                  <  SRR4302541.8166145/94‑1 (MQ=60)

                                ACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAA                                                                >  SRR4302541.6787643/1‑94 (MQ=60)

                                ACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAA                                                                >  SRR4302541.1099685/1‑94 (MQ=60)

                                ACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAA                                                                <  SRR4302541.5806671/94‑1 (MQ=60)

                                ACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAA                                                                >  SRR4302541.4379037/1‑94 (MQ=60)

                                 CCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAAC                                                               <  SRR4302541.2777840/94‑1 (MQ=60)

                                  CTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCNGATNCCCNATTGGACCTNGCAAGGcaaaaantnntnnnncnngctcaanngnnnanng                                                               >  SRR4302541.105031/1‑60 (MQ=60)

                                  CTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACG                                                              >  SRR4302541.8173808/1‑94 (MQ=60)

                                  CTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACG                                                              >  SRR4302541.6494954/1‑94 (MQ=60)

                                   TTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGT                                                             <  SRR4302541.3011441/94‑1 (MQ=60)

                                    TGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTG                                                            >  SRR4302541.8662337/1‑94 (MQ=60)

                                    TGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTG                                                            <  SRR4302541.6259799/94‑1 (MQ=60)

                                     GTTTTATTAACCAGTGAGGGCCTTCGCTTCCCGGATTCCCTATTGGACGTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGC                                                           <  SRR4302541.1572939/94‑1 (MQ=60)

                                      TTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCT                                                          >  SRR4302541.2906634/1‑94 (MQ=60)

                                         TATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTC                                                       <  SRR4302541.1827206/94‑1 (MQ=60)

                                          ATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACTACGTGCTGTCA                                                      >  SRR4302541.8472264/1‑94 (MQ=60)

                                          ATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCA                                                      >  SRR4302541.2177140/1‑94 (MQ=60)

                                          ATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCA                                                      >  SRR4302541.5215737/1‑94 (MQ=60)

                                            TAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACC                                                    >  SRR4302541.3050621/1‑94 (MQ=60)

                                             AACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCA                                                   <  SRR4302541.6030668/94‑1 (MQ=60)

                                             AACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCA                                                   <  SRR4302541.6030669/94‑1 (MQ=60)

                                             AACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCA                                                   <  SRR4302541.5666094/94‑1 (MQ=60)

                                              ACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAG                                                  >  SRR4302541.6098425/1‑94 (MQ=60)

                                              ACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAC                                                  >  SRR4302541.2992425/1‑94 (MQ=60)

                                                  GTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAA                                              >  SRR4302541.1080525/1‑94 (MQ=60)

                                                   TGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAC                                             <  SRR4302541.7664093/94‑1 (MQ=60)

                                                   TGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAAC                                             <  SRR4302541.1049772/94‑1 (MQ=60)

                                                    GAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACC                                            >  SRR4302541.3147458/1‑94 (MQ=60)

                                                     AGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCA                                           <  SRR4302541.5993540/94‑1 (MQ=60)

                                                      GGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGTTGTCACCAGCGAACCAC                                          >  SRR4302541.7922427/1‑94 (MQ=60)

                                                      GGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCAC                                          >  SRR4302541.3914177/1‑94 (MQ=60)

                                                       GCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACT                                         <  SRR4302541.3612826/94‑1 (MQ=60)

                                                       GCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACT                                         >  SRR4302541.5972188/1‑94 (MQ=60)

                                                        CCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTA                                        <  SRR4302541.2018857/94‑1 (MQ=60)

                                                         CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC                                       >  SRR4302541.8723528/1‑94 (MQ=60)

                                                         CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC                                       >  SRR4302541.4956044/1‑94 (MQ=60)

                                                         CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC                                       >  SRR4302541.3643286/1‑94 (MQ=60)

                                                         CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC                                       >  SRR4302541.7570098/1‑94 (MQ=60)

                                                         CCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAC                                       >  SRR4302541.5946750/1‑94 (MQ=60)

                                                          CTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACG                                      >  SRR4302541.6569201/1‑94 (MQ=60)

                                                          CTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACG                                      >  SRR4302541.5618193/1‑94 (MQ=60)

                                                           TTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGC                                     >  SRR4302541.4040500/1‑94 (MQ=60)

                                                             CGCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAA                                   >  SRR4302541.3319092/1‑94 (MQ=60)

                                                              GCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAA                                  >  SRR4302541.6377401/1‑94 (MQ=60)

                                                              GCTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAA                                  >  SRR4302541.8805796/1‑94 (MQ=60)

                                                               CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGACCCACTAGGCAAAC                                 >  SRR4302541.607098/1‑94 (MQ=60)

                                                               CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG                                 <  SRR4302541.7948126/94‑1 (MQ=60)

                                                               CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG                                 <  SRR4302541.6830754/94‑1 (MQ=60)

                                                               CTTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAG                                 <  SRR4302541.2458597/94‑1 (MQ=60)

                                                                TTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGC                                >  SRR4302541.7472421/1‑94 (MQ=60)

                                                                TTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGC                                >  SRR4302541.4897729/1‑94 (MQ=60)

                                                                TTCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGC                                <  SRR4302541.8887751/94‑1 (MQ=60)

                                                                 TCCCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCC                               >  SRR4302541.5744640/1‑94 (MQ=60)

                                                                   CCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGC                             >  SRR4302541.3164339/1‑94 (MQ=60)

                                                                   CCGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGC                             >  SRR4302541.4834546/1‑94 (MQ=60)

                                                                    CGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCT                            >  SRR4302541.5849053/1‑94 (MQ=60)

                                                                    CGGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCT                            <  SRR4302541.5125828/94‑1 (MQ=60)

                                                                     GGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           <  SRR4302541.2145577/94‑1 (MQ=60)

                                                                     GGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           <  SRR4302541.4348588/94‑1 (MQ=60)

                                                                     GGATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTT                           <  SRR4302541.4899948/94‑1 (MQ=60)

                                                                      GATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTC                          <  SRR4302541.7710225/94‑1 (MQ=60)

                                                                      GATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTC                          <  SRR4302541.5866832/94‑1 (MQ=60)

                                                                      GATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTC                          <  SRR4302541.951916/94‑1 (MQ=60)

                                                                       ATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCC                         >  SRR4302541.5498479/1‑94 (MQ=60)

                                                                       ATTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCC                         >  SRR4302541.6254695/1‑94 (MQ=60)

                                                                        TTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCA                        <  SRR4302541.1430786/94‑1 (MQ=60)

                                                                        TTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCA                        <  SRR4302541.7051706/94‑1 (MQ=60)

                                                                        TTCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCA                        >  SRR4302541.115845/1‑94 (MQ=60)

                                                                         TCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCAC                       >  SRR4302541.3450400/1‑94 (MQ=60)

                                                                         TCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCAC                       <  SRR4302541.824916/94‑1 (MQ=60)

                                                                         TCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCAC                       >  SRR4302541.8195736/1‑94 (MQ=60)

                                                                         TCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCAC                       >  SRR4302541.4261205/1‑94 (MQ=60)

                                                                         TCCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCAC                       >  SRR4302541.3450402/1‑94 (MQ=60)

                                                                          CCCTATTGGACCTGTGAAGGCACAAACTTCGCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACC                      <  SRR4302541.2985336/94‑1 (MQ=60)

                                                                          CCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACC                      <  SRR4302541.2985575/94‑1 (MQ=60)

                                                                          CCCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACC                      >  SRR4302541.8261098/1‑94 (MQ=60)

                                                                           CCTATTGGACCTGGCAAGGCAAAACCTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCA                     <  SRR4302541.8713390/94‑1 (MQ=60)

                                                                           CCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCA                     <  SRR4302541.3723857/94‑1 (MQ=60)

                                                                           CCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCA                     >  SRR4302541.1514586/1‑94 (MQ=60)

                                                                           CCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCA                     >  SRR4302541.4006840/1‑94 (MQ=60)

                                                                           CCTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACAAGCGAACCACTACGCAAAGCCGCTTCCACCC                     >  SRR4302541.7219912/1‑94 (MQ=60)

                                                                            CTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302541.4708234/1‑94 (MQ=60)

                                                                            CTATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCAC                    >  SRR4302541.7502063/1‑94 (MQ=60)

                                                                             TATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACC                   >  SRR4302541.1001947/1‑94 (MQ=60)

                                                                             TATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACC                   >  SRR4302541.8757522/1‑94 (MQ=60)

                                                                             TATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACC                   <  SRR4302541.2293766/94‑1 (MQ=60)

                                                                              ATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACATCGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCA                  <  SRR4302541.6140253/94‑1 (MQ=60)

                                                                              ATTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCA                  >  SRR4302541.4370871/1‑94 (MQ=60)

                                                                               TTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAG                 <  SRR4302541.6480991/94‑1 (MQ=60)

                                                                               TTGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAG                 <  SRR4302541.702575/94‑1 (MQ=60)

                                                                                TGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAca                >  SRR4302541.2800584/1‑92 (MQ=60)

                                                                                TGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGT                <  SRR4302541.3714747/94‑1 (MQ=60)

                                                                                TGGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGT                >  SRR4302541.8128181/1‑94 (MQ=60)

                                                                                 GGACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTA               <  SRR4302541.1576739/94‑1 (MQ=60)

                                                                                  GACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTAC              <  SRR4302541.3542958/94‑1 (MQ=60)

                                                                                  GACCTGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTAC              <  SRR4302541.5332408/94‑1 (MQ=60)

                                                                                      TGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCT          >  SRR4302541.209691/1‑94 (MQ=60)

                                                                                      TGGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCT          >  SRR4302541.1876927/1‑94 (MQ=60)

                                                                                       GGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT         <  SRR4302541.8569054/94‑1 (MQ=60)

                                                                                       GGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT         <  SRR4302541.2360103/94‑1 (MQ=60)

                                                                                       GGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT         <  SRR4302541.8539599/94‑1 (MQ=60)

                                                                                       GGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT         >  SRR4302541.7062826/1‑94 (MQ=60)

                                                                                       GGCAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT         >  SRR4302541.627995/1‑94 (MQ=60)

                                                                                         CAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTA       >  SRR4302541.1206003/1‑94 (MQ=60)

                                                                                         CAAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTA       >  SRR4302541.4064150/1‑94 (MQ=60)

                                                                                          AAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      <  SRR4302541.144456/94‑1 (MQ=60)

                                                                                          AAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      >  SRR4302541.4724543/1‑94 (MQ=60)

                                                                                          AAGGCAAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTAC      >  SRR4302541.3971502/1‑94 (MQ=60)

                                                                                            GC‑AAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTA   <  SRR4302541.5083664/94‑1 (MQ=60)

                                                                                            GC‑AAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTA   >  SRR4302541.3755935/1‑94 (MQ=60)

                                                                                             C‑AAAAACTTCTCGCCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTA   <  SRR4302541.7663862/94‑1 (MQ=60)

                                                                                             C‑AAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  <  SRR4302541.2155861/94‑1 (MQ=60)

                                                                                             C‑AAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  <  SRR4302541.2600214/94‑1 (MQ=60)

AGAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAAGG‑AAAAACTTCTCG‑CCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTTTACTTAG  >  NC_000913/3430360‑3430546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`