Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,978,702 C→T S68F (TCC→TTC)  yifK → putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,978,7020CT99.9% 2302.3 / NA 647S68F (TCC→TTC) yifKputative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base T (316/329);  minor base G (0/1);  total (316/331)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 690 total aligned reads displayed.

TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTCCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGT  >  NC_000913/3978612‑3978791
                                                                                          |                                                                                         
 gAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCt                                                                                        >  2:5432474/1‑93 (MQ=255)
  aaaTGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTc                                                                                       <  1:435526/93‑1 (MQ=255)
   aaTGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCg                                                                                      >  2:8065872/1‑93 (MQ=255)
    aTGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGa                                                                                     >  2:615691/1‑93 (MQ=255)
     tGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGaa                                                                                    <  2:267714/93‑1 (MQ=255)
      gggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAac                                                                                   <  2:1351927/93‑1 (MQ=255)
      gggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAac                                                                                   <  2:1911065/93‑1 (MQ=255)
      gggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAac                                                                                   <  2:5648569/93‑1 (MQ=255)
       ggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAacc                                                                                  <  1:313858/93‑1 (MQ=255)
       ggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTGTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGaaac                                                                                  >  1:7787726/1‑91 (MQ=255)
        gccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccg                                                                                 <  1:6115918/93‑1 (MQ=255)
        gccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccg                                                                                 <  1:8151740/93‑1 (MQ=255)
         ccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCGTAGAaccgg                                                                                >  2:4855712/1‑93 (MQ=255)
         ccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTACTCGAaccgg                                                                                >  2:114057/1‑93 (MQ=255)
          cgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggt                                                                               <  1:1304792/93‑1 (MQ=255)
           gggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggtt                                                                              <  2:6536215/93‑1 (MQ=255)
            ggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggtta                                                                             >  2:7013400/1‑93 (MQ=255)
              ccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttacc                                                                           >  2:2441928/1‑93 (MQ=255)
              ccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttacc                                                                           <  1:623063/93‑1 (MQ=255)
                aTCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccgg                                                                         >  2:286101/1‑93 (MQ=255)
                aTCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccgg                                                                         <  2:4056127/93‑1 (MQ=255)
                 tCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccggt                                                                        >  2:6752268/1‑93 (MQ=255)
                  ccGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccggtt                                                                       <  2:1829203/93‑1 (MQ=255)
                  ccGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccggtt                                                                       <  2:4412235/93‑1 (MQ=255)
                  ccGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccggtt                                                                       >  1:5696365/1‑93 (MQ=255)
                     tATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgt                                                                    <  1:3236989/93‑1 (MQ=255)
                      aTTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgtt                                                                   <  2:5989089/93‑1 (MQ=255)
                      aTTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgtt                                                                   >  1:8549908/1‑93 (MQ=255)
                       ttgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgttc                                                                  <  1:5061707/93‑1 (MQ=255)
                        tgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCTTGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGttcgttcg                                                                 <  2:5268264/93‑1 (MQ=255)
                        tgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACTGGTTACCGGttcgttcg                                                                 >  1:2651789/1‑93 (MQ=255)
                        tgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGttcgttcg                                                                 <  1:5417684/93‑1 (MQ=255)
                           tgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCg                                                              <  1:8326707/93‑1 (MQ=255)
                            ggCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGt                                                             <  2:7223248/93‑1 (MQ=255)
                            ggCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGt                                                             >  1:4588817/1‑93 (MQ=255)
                              ccTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGttt                                                           <  1:1950817/93‑1 (MQ=255)
                               cTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTa                                                          >  2:7563475/1‑93 (MQ=255)
                               cTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTa                                                          <  1:4799710/93‑1 (MQ=255)
                                tataTCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGTCGTTTAt                                                         >  1:4697791/1‑93 (MQ=255)
                                   atcatcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATgcg                                                      >  1:6898030/1‑93 (MQ=255)
                                    tcatcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATgcgc                                                     >  1:7436772/1‑93 (MQ=255)
                                     catcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCa                                                    <  2:4476242/93‑1 (MQ=255)
                                        cGCCGGGCTGTTCGTCTTTTTCATCATGCTTTCAATGGGCGAAATGTTGTTGCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCg                                                 <  2:1205326/93‑1 (MQ=255)
                                         gCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGt                                                <  1:1683924/93‑1 (MQ=255)
                                          ccGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGtt                                               <  2:3668818/93‑1 (MQ=255)
                                           cGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTta                                              >  2:8284528/1‑93 (MQ=255)
                                            gggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTtat                                             >  2:3196243/1‑93 (MQ=255)
                                             ggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTtata                                            <  2:916489/93‑1 (MQ=255)
                                             ggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTtata                                            >  2:4694430/1‑93 (MQ=255)
                                             ggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTtata                                            <  1:213834/93‑1 (MQ=255)
                                             ggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGCTCGCCGTTTATGCGCATCGTtata                                            >  2:5088397/1‑93 (MQ=255)
                                              gCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTatat                                           <  2:4189972/93‑1 (MQ=255)
                                               cTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATg                                          <  1:8636782/93‑1 (MQ=255)
                                               cTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATg                                          <  1:1011434/93‑1 (MQ=255)
                                                tGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGa                                         >  2:3086498/1‑93 (MQ=255)
                                                tGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGa                                         >  1:5508210/1‑93 (MQ=255)
                                                tGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCCTTCGCCGTTTATTCGCCTCGTTATATGa                                         >  2:6422474/1‑93 (MQ=255)
                                                 gTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAg                                        >  1:5905727/1‑93 (MQ=255)
                                                  ttCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGc                                       >  1:1477300/1‑93 (MQ=255)
                                                  ttCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGc                                       >  1:2280529/1‑93 (MQ=255)
                                                   tCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGcc                                      >  1:3723892/1‑93 (MQ=255)
                                                   tCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGcc                                      <  1:7248906/93‑1 (MQ=255)
                                                      tCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGt                                   <  1:3913012/93‑1 (MQ=255)
                                                      tCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGt                                   <  2:3592049/93‑1 (MQ=255)
                                                      tCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGt                                   >  2:4590607/1‑93 (MQ=255)
                                                        tttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTc                                 <  1:1113649/93‑1 (MQ=255)
                                                        tttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTc                                 <  1:3404629/93‑1 (MQ=255)
                                                        tttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTc                                 >  2:171637/1‑93 (MQ=255)
                                                         ttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCt                                <  2:147062/93‑1 (MQ=255)
                                                         ttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCt                                <  2:3884226/93‑1 (MQ=255)
                                                          tttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCtt                               <  1:6446391/93‑1 (MQ=255)
                                                           ttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCttt                              >  2:7450163/1‑93 (MQ=255)
                                                           ttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCttt                              <  2:7950007/93‑1 (MQ=255)
                                                            tcatcaTGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTg                             >  1:6591796/1‑93 (MQ=255)
                                                             catcatGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTgg                            <  1:4526572/93‑1 (MQ=255)
                                                              atcatGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGc                           >  1:4951289/1‑93 (MQ=255)
                                                                  tGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGGTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTAtc                       >  2:7804805/1‑93 (MQ=255)
                                                                  tGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGCTCGTTCGCCGCTTATGCGCATCGCTATATGAGTCCGGTCTTTGGCTAtc                       >  2:3328454/1‑93 (MQ=255)
                                                                     gTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCa                    <  1:4155080/93‑1 (MQ=255)
                                                                      ttCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAc                   >  1:243174/1‑93 (MQ=255)
                                                                      ttCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAc                   <  2:5786682/93‑1 (MQ=255)
                                                                       tCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAcc                  >  1:7660332/1‑93 (MQ=255)
                                                                          aTGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGcc               <  2:2139707/93‑1 (MQ=255)
                                                                          aTGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGcc               >  2:344328/1‑93 (MQ=255)
                                                                          aTGGGCGAAAGTTTGTTCCTCGAACCGGTTACCGGTGCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGcc               <  1:306282/93‑1 (MQ=255)
                                                                           tGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCt              >  1:8054880/1‑93 (MQ=255)
                                                                            gggCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTg             <  2:85573/93‑1 (MQ=255)
                                                                             ggCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTgg            >  1:5267022/1‑93 (MQ=255)
                                                                              gCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTggc           >  1:2883513/1‑92 (MQ=255)
                                                                               cGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTc          <  2:5507623/93‑1 (MQ=255)
                                                                                gAAATGTTGTTCCTCGAACCGTTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCt         >  2:8654202/1‑93 (MQ=255)
                                                                                gAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCt         <  2:4978372/93‑1 (MQ=255)
                                                                                 aaaTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCtt        >  1:6971941/1‑93 (MQ=255)
                                                                                 aaaTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCtt        >  2:6873578/1‑93 (MQ=255)
                                                                                   aTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTAc      >  1:5816546/1‑93 (MQ=255)
                                                                                    tgttgtTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACt     >  2:3000703/1‑93 (MQ=255)
                                                                                    tgttgtTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACt     <  1:898993/93‑1 (MQ=255)
                                                                                     tttgtTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTg    <  2:4305613/92‑1 (MQ=255)
                                                                                     gttgttCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTg    <  2:7725749/93‑1 (MQ=255)
                                                                                       tgtTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGt  <  1:6756647/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTCCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGT  >  NC_000913/3978612‑3978791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 349 total aligned reads displayed.
CCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTCCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTAT  >  NC_000913/3978609‑3978795
                                                                                             |                                                                                             
CCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTT                                                                                               <  SRR4302541.7743112/94‑1 (MQ=60)
 CCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTC                                                                                              <  SRR4302541.631742/94‑1 (MQ=60)
 CCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTC                                                                                              >  SRR4302541.7026685/1‑94 (MQ=60)
 CCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTC                                                                                              >  SRR4302541.2906502/1‑94 (MQ=60)
  CTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCC                                                                                             <  SRR4302541.6602142/94‑1 (MQ=60)
  CTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCC                                                                                             <  SRR4302541.3800016/94‑1 (MQ=60)
  CTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCC                                                                                             >  SRR4302541.5836064/1‑94 (MQ=60)
   TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCT                                                                                            <  SRR4302541.5033214/94‑1 (MQ=60)
   TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCT                                                                                            <  SRR4302541.2569471/94‑1 (MQ=60)
   TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCT                                                                                            <  SRR4302541.228109/94‑1 (MQ=60)
   TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCT                                                                                            >  SRR4302541.2083125/1‑94 (MQ=60)
   TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCT                                                                                            <  SRR4302541.1718764/94‑1 (MQ=60)
   TGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCT                                                                                            <  SRR4302541.1661461/94‑1 (MQ=60)
    GAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTC                                                                                           <  SRR4302541.5180481/94‑1 (MQ=60)
     AAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCG                                                                                          <  SRR4302541.3925678/94‑1 (MQ=60)
     AAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCG                                                                                          <  SRR4302541.439630/94‑1 (MQ=60)
     AAAGGGGGCGGGCCAGCCGTATTGTTCGCCTATATCATCGCCGGGCCGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCG                                                                                          <  SRR4302541.1543308/94‑1 (MQ=60)
         GGGTCGGGCCATCCGTATTGTTGGCCGATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACC                                                                                      <  SRR4302541.605337/94‑1 (MQ=60)
         GGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACC                                                                                      <  SRR4302541.5482255/94‑1 (MQ=60)
         GGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTGTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAAAC                                                                                      >  SRR4302541.7870943/1‑94 (MQ=60)
          GGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCG                                                                                     <  SRR4302541.1583913/94‑1 (MQ=60)
           GCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGG                                                                                    <  SRR4302541.6178372/94‑1 (MQ=60)
           GCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGG                                                                                    <  SRR4302541.1324655/94‑1 (MQ=60)
           GCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGG                                                                                    <  SRR4302541.8240852/94‑1 (MQ=60)
           GCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGG                                                                                    >  SRR4302541.6183281/1‑94 (MQ=60)
           GCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGG                                                                                    <  SRR4302541.4142314/94‑1 (MQ=60)
            CCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGT                                                                                   <  SRR4302541.2181745/94‑1 (MQ=60)
            CCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGT                                                                                   >  SRR4302541.6982658/1‑94 (MQ=60)
            CCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGT                                                                                   <  SRR4302541.3478090/94‑1 (MQ=60)
            CCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGT                                                                                   <  SRR4302541.7258826/94‑1 (MQ=60)
              GGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTA                                                                                 <  SRR4302541.5475385/94‑1 (MQ=60)
              GGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTA                                                                                 <  SRR4302541.963720/94‑1 (MQ=60)
              GGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTA                                                                                 >  SRR4302541.5642909/1‑94 (MQ=60)
                GCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACC                                                                               <  SRR4302541.319344/94‑1 (MQ=60)
                GCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACC                                                                               <  SRR4302541.4521644/94‑1 (MQ=60)
                GCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGCTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACC                                                                               >  SRR4302541.569747/1‑94 (MQ=60)
                 CCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCG                                                                              >  SRR4302541.8489124/1‑94 (MQ=60)
                 CCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCG                                                                              >  SRR4302541.7080429/1‑94 (MQ=60)
                 CCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCG                                                                              >  SRR4302541.690185/1‑94 (MQ=60)
                 CCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCG                                                                              <  SRR4302541.628912/94‑1 (MQ=60)
                 CCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCG                                                                              >  SRR4302541.2798501/1‑94 (MQ=60)
                 CCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCG                                                                              <  SRR4302541.25029/94‑1 (MQ=60)
                  CATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGG                                                                             <  SRR4302541.1098459/94‑1 (MQ=60)
                  CATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGG                                                                             >  SRR4302541.7481335/1‑94 (MQ=60)
                   ATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGT                                                                            >  SRR4302541.8693122/1‑94 (MQ=60)
                   ATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGT                                                                            >  SRR4302541.6936168/1‑94 (MQ=60)
                    TCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTT                                                                           >  SRR4302541.6349868/1‑94 (MQ=60)
                     CCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTC                                                                          <  SRR4302541.7735114/94‑1 (MQ=60)
                     CCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGGCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTC                                                                          <  SRR4302541.2973790/94‑1 (MQ=60)
                      CGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCG                                                                         >  SRR4302541.5744749/1‑94 (MQ=60)
                       GTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGT                                                                        >  SRR4302541.1396308/1‑94 (MQ=60)
                       GTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGT                                                                        <  SRR4302541.2654809/94‑1 (MQ=60)
                       GTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGT                                                                        >  SRR4302541.2950924/1‑94 (MQ=60)
                       GTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGT                                                                        >  SRR4302541.6752557/1‑94 (MQ=60)
                        TATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTT                                                                       <  SRR4302541.3269674/94‑1 (MQ=60)
                        TATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTT                                                                       >  SRR4302541.8641804/1‑94 (MQ=60)
                        TATTGTTGGCCTATATCATCGCCGGGCTGTTCGGCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTT                                                                       <  SRR4302541.8867691/94‑1 (MQ=60)
                         ATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTC                                                                      <  SRR4302541.613969/94‑1 (MQ=60)
                         ATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTC                                                                      <  SRR4302541.8676030/94‑1 (MQ=60)
                          TTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACTGGTTACCGGTTCGTTCG                                                                     >  SRR4302541.2678180/1‑94 (MQ=60)
                           TGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGC                                                                    >  SRR4302541.114642/1‑94 (MQ=60)
                           TGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGC                                                                    >  SRR4302541.7359612/1‑94 (MQ=60)
                            GTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCC                                                                   >  SRR4302541.3778870/1‑94 (MQ=60)
                             TTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCG                                                                  <  SRR4302541.5900279/94‑1 (MQ=60)
                              TGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGT                                                                 >  SRR4302541.4635343/1‑94 (MQ=60)
                              TGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGT                                                                 <  SRR4302541.8417160/94‑1 (MQ=60)
                                GCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTT                                                               >  SRR4302541.3040000/1‑94 (MQ=60)
                                 CCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTA                                                              >  SRR4302541.6512570/1‑94 (MQ=60)
                                  CTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTAT                                                             >  SRR4302541.7053608/1‑94 (MQ=60)
                                  CTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTAT                                                             >  SRR4302541.4508683/1‑94 (MQ=60)
                                  CTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTAT                                                             <  SRR4302541.7659166/94‑1 (MQ=60)
                                     TATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCG                                                          >  SRR4302541.6632729/1‑94 (MQ=60)
                                     TATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCG                                                          >  SRR4302541.5216024/1‑94 (MQ=60)
                                     TATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCG                                                          <  SRR4302541.5555428/94‑1 (MQ=60)
                                     TATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCG                                                          >  SRR4302541.8298510/1‑94 (MQ=60)
                                     TATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGATACCGGTTCGTTCGCCGTTTATGCG                                                          <  SRR4302541.1223167/94‑1 (MQ=60)
                                      ATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGC                                                         >  SRR4302541.7516261/1‑94 (MQ=60)
                                         ATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATC                                                      >  SRR4302541.5935831/1‑94 (MQ=60)
                                         ATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATC                                                      >  SRR4302541.2246767/1‑94 (MQ=60)
                                         ATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATC                                                      >  SRR4302541.6796237/1‑94 (MQ=60)
                                           CGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGT                                                    <  SRR4302541.317189/94‑1 (MQ=60)
                                             CCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTA                                                  <  SRR4302541.1100434/94‑1 (MQ=60)
                                             CCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTA                                                  >  SRR4302541.3345423/1‑94 (MQ=60)
                                              CGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTAT                                                 >  SRR4302541.1008770/1‑94 (MQ=60)
                                               GGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATA                                                >  SRR4302541.6911762/1‑94 (MQ=60)
                                               GGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATA                                                <  SRR4302541.6805299/94‑1 (MQ=60)
                                               GGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATA                                                >  SRR4302541.3287335/1‑94 (MQ=60)
                                               GGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATA                                                >  SRR4302541.3116234/1‑94 (MQ=60)
                                               GGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGCTGTTCCTCGAACCGGTTACCGTTTCGTTCGCCGTTTATGCGCATCGTTATA                                                <  SRR4302541.8886296/94‑1 (MQ=60)
                                                GGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATAT                                               <  SRR4302541.4811166/94‑1 (MQ=60)
                                                GGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATAT                                               >  SRR4302541.4574805/1‑94 (MQ=60)
                                                 GCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATG                                              <  SRR4302541.4029831/94‑1 (MQ=60)
                                                 GCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATG                                              <  SRR4302541.4259031/94‑1 (MQ=60)
                                                  GTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGA                                             <  SRR4302541.3013594/94‑1 (MQ=60)
                                                  CTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGA                                             <  SRR4302541.7785285/94‑1 (MQ=60)
                                                  CTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGA                                             <  SRR4302541.1020796/94‑1 (MQ=60)
                                                  CTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGA                                             <  SRR4302541.8729311/94‑1 (MQ=60)
                                                  CTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGA                                             >  SRR4302541.1477013/1‑94 (MQ=60)
                                                   TGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCTGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAG                                            >  SRR4302541.4318/1‑94 (MQ=60)
                                                   TGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAG                                            >  SRR4302541.5965837/1‑94 (MQ=60)
                                                   TGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAG                                            >  SRR4302541.4598298/1‑94 (MQ=60)
                                                   TGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAG                                            <  SRR4302541.818068/94‑1 (MQ=60)
                                                    GTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGC                                           >  SRR4302541.6449776/1‑94 (MQ=60)
                                                    GTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGC                                           >  SRR4302541.2302576/1‑94 (MQ=60)
                                                     TTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCC                                          >  SRR4302541.3761413/1‑94 (MQ=60)
                                                     TTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCC                                          <  SRR4302541.1468756/94‑1 (MQ=60)
                                                     TTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCC                                          <  SRR4302541.7736908/94‑1 (MQ=60)
                                                     TTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGGTCGCCGTTTATGCGCATCGTTATATGAGCC                                          >  SRR4302541.3174361/1‑94 (MQ=60)
                                                      TCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCC                                         <  SRR4302541.4744517/94‑1 (MQ=60)
                                                      TCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCC                                         <  SRR4302541.7326223/94‑1 (MQ=60)
                                                      TCGTCTTTTTCATCATGCGTGCAATGGTCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCC                                         <  SRR4302541.4744518/94‑1 (MQ=60)
                                                       CGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCG                                        <  SRR4302541.7811984/94‑1 (MQ=60)
                                                       CGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCG                                        >  SRR4302541.8603223/1‑94 (MQ=60)
                                                        GTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGT                                       >  SRR4302541.7923773/1‑94 (MQ=60)
                                                        GTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGT                                       >  SRR4302541.6120498/1‑94 (MQ=60)
                                                        GTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGT                                       >  SRR4302541.6492247/1‑94 (MQ=60)
                                                        GTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGT                                       >  SRR4302541.4682557/1‑94 (MQ=60)
                                                        GTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGT                                       >  SRR4302541.2338973/1‑94 (MQ=60)
                                                        GTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGT                                       >  SRR4302541.5865013/1‑94 (MQ=60)
                                                        GTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGT                                       <  SRR4302541.194253/94‑1 (MQ=60)
                                                        GTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGT                                       >  SRR4302541.6969005/1‑94 (MQ=60)
                                                         TCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTT                                      >  SRR4302541.5729973/1‑94 (MQ=60)
                                                         TCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTT                                      <  SRR4302541.3952080/94‑1 (MQ=60)
                                                         TCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTT                                      <  SRR4302541.3832621/94‑1 (MQ=60)
                                                         TCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTT                                      >  SRR4302541.8672940/1‑94 (MQ=60)
                                                          TTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTC                                     <  SRR4302541.2831859/94‑1 (MQ=60)
                                                          CTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTT                                     >  SRR4302541.8558732/1‑94 (MQ=60)
                                                          CTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTC                                     >  SRR4302541.8915286/1‑94 (MQ=60)
                                                          CTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTC                                     >  SRR4302541.2136263/1‑94 (MQ=60)
                                                          CTTTTTCATCAGGCGTTCAATGGGCGAAATGTTGTTCCTCGAGCCGGTTCCCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTC                                     <  SRR4302541.2019911/94‑1 (MQ=60)
                                                           TTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCT                                    <  SRR4302541.1124110/94‑1 (MQ=60)
                                                           TTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCT                                    <  SRR4302541.3438602/94‑1 (MQ=60)
                                                           TTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCT                                    <  SRR4302541.8285930/94‑1 (MQ=60)
                                                           TTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCT                                    <  SRR4302541.1866819/94‑1 (MQ=60)
                                                           TTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCT                                    <  SRR4302541.3602178/94‑1 (MQ=60)
                                                           TTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCT                                    <  SRR4302541.8324744/94‑1 (MQ=60)
                                                            TTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTT                                   >  SRR4302541.1785513/1‑94 (MQ=60)
                                                             TTTCATCATGCTTTCAATGGGCGAAATGTTGTTCCTCGACCCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTT                                  <  SRR4302541.5376766/94‑1 (MQ=60)
                                                             TTTCATCATGCGTTCAATGGGCGAACTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCCCATCGTTATATGACCCCGTTCTTT                                  <  SRR4302541.5376768/94‑1 (MQ=60)
                                                             TTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTT                                  <  SRR4302541.2703155/94‑1 (MQ=60)
                                                             TTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTT                                  <  SRR4302541.6512087/94‑1 (MQ=60)
                                                             TTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTT                                  <  SRR4302541.5462170/94‑1 (MQ=60)
                                                             TTTCATCATGCGTTCAATGGGCGAAATGGTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTT                                  <  SRR4302541.5376765/94‑1 (MQ=60)
                                                               TCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGG                                <  SRR4302541.6972011/94‑1 (MQ=60)
                                                               TCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGG                                >  SRR4302541.4068372/1‑94 (MQ=60)
                                                               TCATCATGCGTTCAATGGGCGAAATGGTGTTCCTCGAACTGGCTACCGGTTCGTCCGCTGTTTATGCCCATCGTTATATGAGCCCGTTCTTTGG                                <  SRR4302541.4626688/94‑1 (MQ=60)
                                                                CATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATTAGCCCGTTCTTTTGC                               >  SRR4302541.5001897/1‑94 (MQ=60)
                                                                CATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGC                               >  SRR4302541.5540934/1‑94 (MQ=60)
                                                                CATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGC                               >  SRR4302541.5001896/1‑94 (MQ=60)
                                                                  TCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTA                             >  SRR4302541.5881332/1‑94 (MQ=60)
                                                                  TCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTA                             >  SRR4302541.7180218/1‑94 (MQ=60)
                                                                   CATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTAT                            >  SRR4302541.7027636/1‑94 (MQ=60)
                                                                   CATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTAT                            <  SRR4302541.3232827/94‑1 (MQ=60)
                                                                    ATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATC                           >  SRR4302541.1042895/1‑94 (MQ=60)
                                                                     TGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCT                          <  SRR4302541.5083920/94‑1 (MQ=60)
                                                                     TGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCT                          <  SRR4302541.5123763/94‑1 (MQ=60)
                                                                     TGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCT                          <  SRR4302541.5843214/94‑1 (MQ=60)
                                                                       CGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTac                        >  SRR4302541.4748036/1‑92 (MQ=60)
                                                                       CGTTCAATGGGCGAAATGTTGGTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCA                        <  SRR4302541.1516624/94‑1 (MQ=60)
                                                                        GTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAC                       <  SRR4302541.4196188/94‑1 (MQ=60)
                                                                        GTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAC                       <  SRR4302541.3436514/94‑1 (MQ=60)
                                                                        GTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAC                       >  SRR4302541.245109/1‑94 (MQ=60)
                                                                         TTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACC                      <  SRR4302541.5101604/94‑1 (MQ=60)
                                                                         TTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACC                      <  SRR4302541.8219982/94‑1 (MQ=60)
                                                                          TCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCG                     <  SRR4302541.1291561/94‑1 (MQ=60)
                                                                           CAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGC                    <  SRR4302541.5817028/94‑1 (MQ=60)
                                                                           CAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGC                    >  SRR4302541.4487623/1‑94 (MQ=60)
                                                                           CAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGC                    >  SRR4302541.619780/1‑94 (MQ=60)
                                                                           CAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTAGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGC                    >  SRR4302541.4822637/1‑94 (MQ=60)
                                                                            AATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCC                   >  SRR4302541.4852046/1‑94 (MQ=60)
                                                                             ATGGGCGAAATGTTTTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCT                  <  SRR4302541.308991/94‑1 (MQ=60)
                                                                             ATGGGCGAAATGTTGTTCCTCGAACCGGTTATCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCT                  >  SRR4302541.7765547/1‑94 (MQ=60)
                                                                             ATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCT                  >  SRR4302541.3123297/1‑94 (MQ=60)
                                                                             ATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCT                  >  SRR4302541.8143415/1‑94 (MQ=60)
                                                                              TGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACGGCCTG                 <  SRR4302541.8818107/94‑1 (MQ=60)
                                                                              TGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTG                 <  SRR4302541.5183741/94‑1 (MQ=60)
                                                                              TGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTG                 >  SRR4302541.5332712/1‑94 (MQ=60)
                                                                               GGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGG                <  SRR4302541.3536160/94‑1 (MQ=60)
                                                                               GGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGG                <  SRR4302541.2376508/94‑1 (MQ=60)
                                                                                  CGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCT             >  SRR4302541.3143825/1‑94 (MQ=60)
                                                                                  CGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCT             >  SRR4302541.7439054/1‑94 (MQ=60)
                                                                                   GAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTT            >  SRR4302541.8031616/1‑94 (MQ=60)
                                                                                   GAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTT            >  SRR4302541.4610843/1‑94 (MQ=60)
                                                                                   GAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTT            >  SRR4302541.2139121/1‑94 (MQ=60)
                                                                                   GAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTT            >  SRR4302541.4763780/1‑94 (MQ=60)
                                                                                     AATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTAC          >  SRR4302541.5875648/1‑94 (MQ=60)
                                                                                     AATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTAC          <  SRR4302541.6661268/94‑1 (MQ=60)
                                                                                      ATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACT         <  SRR4302541.243273/94‑1 (MQ=60)
                                                                                      ATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACT         <  SRR4302541.4968600/94‑1 (MQ=60)
                                                                                      ATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACT         <  SRR4302541.8186746/94‑1 (MQ=60)
                                                                                      ATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACT         >  SRR4302541.4473544/1‑94 (MQ=60)
                                                                                      ATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACT         <  SRR4302541.4392555/94‑1 (MQ=60)
                                                                                       TGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTG        <  SRR4302541.6982189/94‑1 (MQ=60)
                                                                                       TGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTG        >  SRR4302541.6210620/1‑94 (MQ=60)
                                                                                        GTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGG       >  SRR4302541.6566693/1‑94 (MQ=60)
                                                                                         TTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAGCGCCTGGGCTTACTGGT      >  SRR4302541.8120910/1‑94 (MQ=60)
                                                                                         TTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGT      <  SRR4302541.5061363/94‑1 (MQ=60)
                                                                                            TTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTA   >  SRR4302541.2263060/1‑94 (MQ=60)
                                                                                             TCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTAT  <  SRR4302541.7665760/94‑1 (MQ=60)
                                                                                             TCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTAT  <  SRR4302541.7509368/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTCCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTAT  >  NC_000913/3978609‑3978795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑