Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,007,718 2 bp→CG coding (943‑944/1023 nt) pldB → lysophospholipase L(2)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,007,7180GC100.0% 1929.8 / NA 554A315R (GCC→CGC) pldBlysophospholipase L(2)
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (297/257);  total (297/257)
*NC_0009134,007,7190CG99.8% 1930.5 / NA 553A315R (GCC→CGC) pldBlysophospholipase L(2)
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (296/256);  minor base T (0/1);  total (296/257)
Fisher's exact test for biased strand distribution p-value = 4.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 567 total aligned reads displayed.

ACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGGCCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTT  >  NC_000913/4007631‑4007805
                                                                                       ||                                                                                      
aCCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCa                                                                                    <  1:525623/93‑1 (MQ=255)
 ccgccgCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGGAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAg                                                                                   >  2:40720/1‑93 (MQ=255)
  cgccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGt                                                                                  <  1:1031543/93‑1 (MQ=255)
   gccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTc                                                                                 >  1:7156043/1‑93 (MQ=255)
   gccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTc                                                                                 <  1:1855225/93‑1 (MQ=255)
   gccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTc                                                                                 >  2:6126919/1‑93 (MQ=255)
   gccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGGGCCTACCATGAGATCCTTTTTGAAAAGGAAGCAATGTGCTCAGTc                                                                                 >  2:15223/1‑93 (MQ=255)
   gccgcGGGCCACCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAATGGACGCAATGCGCTCAGTc                                                                                 <  1:4653974/93‑1 (MQ=255)
       cgGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCgcgc                                                                             <  2:2244258/93‑1 (MQ=255)
       cgGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCgcgc                                                                             <  1:2341977/93‑1 (MQ=255)
        gggCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCt                                                                            >  2:467150/1‑93 (MQ=255)
         ggCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTc                                                                           >  2:5001758/1‑93 (MQ=255)
         ggCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTc                                                                           >  1:5696195/1‑93 (MQ=255)
         ggCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTc                                                                           >  2:3086459/1‑93 (MQ=255)
           ccATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCa                                                                         <  2:273070/93‑1 (MQ=255)
            cATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCAc                                                                        >  1:8185697/1‑93 (MQ=255)
                 tGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCAt                                                                   <  1:120843/93‑1 (MQ=255)
                  gTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATc                                                                  >  2:3734920/1‑93 (MQ=255)
                  gTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATc                                                                  >  2:5521424/1‑93 (MQ=255)
                   tCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCg                                                                 >  2:1669674/1‑93 (MQ=255)
                   gcGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCg                                                                 <  1:1515620/92‑1 (MQ=255)
                    cGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGt                                                                <  2:1188190/93‑1 (MQ=255)
                     gAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGtt                                                               <  1:7300982/93‑1 (MQ=255)
                     gAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGtt                                                               <  1:1748647/93‑1 (MQ=255)
                      aaGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTg                                                              >  2:8349157/1‑93 (MQ=255)
                       aggaggACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGa                                                             >  2:8733925/1‑93 (MQ=255)
                         gaggaCGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGAtt                                                           <  1:208668/93‑1 (MQ=255)
                            gaCGGCCGTTGGTAATTAAAGGTGCTTA‑CATGAGATTCTTTTTGAAAAGGACGCAATGCGCTCAATCGCGCTCCACGCCCTCGTTGGtttttt                                                       >  1:1334676/1‑93 (MQ=255)
                              cGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTc                                                      >  2:6467058/1‑93 (MQ=255)
                               ggCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCa                                                     >  2:1959776/1‑93 (MQ=255)
                                 gcGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAc                                                   <  2:5896851/92‑1 (MQ=255)
                                 ccGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAc                                                   >  1:2648365/1‑93 (MQ=255)
                                 ccGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAc                                                   <  2:1801862/93‑1 (MQ=255)
                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTGAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                  <  1:1458499/93‑1 (MQ=255)
                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                  <  1:1922106/93‑1 (MQ=255)
                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                  >  1:399868/1‑93 (MQ=255)
                                   gTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAg                                                 >  2:7670375/1‑93 (MQ=255)
                                    ttGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAgg                                                >  2:7171388/1‑93 (MQ=255)
                                    ttGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAgg                                                >  2:428541/1‑93 (MQ=255)
                                     tGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGc                                               >  2:5142771/1‑93 (MQ=255)
                                       gTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCAt                                             <  2:6272879/93‑1 (MQ=255)
                                       gTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCAt                                             <  2:7492497/93‑1 (MQ=255)
                                       gTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCAt                                             <  2:1015743/93‑1 (MQ=255)
                                         aaTTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATaa                                           <  1:3147379/93‑1 (MQ=255)
                                          aTTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAc                                          >  1:3655872/1‑93 (MQ=255)
                                          aTTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAc                                          <  1:5349750/93‑1 (MQ=255)
                                           ttAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACt                                         >  2:8019744/1‑93 (MQ=255)
                                           ttAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACt                                         >  1:3797745/1‑93 (MQ=255)
                                           ttAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACt                                         <  2:3338376/93‑1 (MQ=255)
                                           ttAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACt                                         <  2:3874190/93‑1 (MQ=255)
                                           ttAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACt                                         <  2:6194606/93‑1 (MQ=255)
                                           ttAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACt                                         >  1:6170249/1‑93 (MQ=255)
                                            tAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTc                                        >  2:3543106/1‑93 (MQ=255)
                                            tAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTc                                        >  2:3013402/1‑93 (MQ=255)
                                            tAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTc                                        >  1:3444100/1‑93 (MQ=255)
                                             aaaGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCa                                       <  1:5461208/93‑1 (MQ=255)
                                               aGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCAcc                                     <  1:8030549/93‑1 (MQ=255)
                                                ggTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCAccc                                    <  1:2979904/93‑1 (MQ=255)
                                                 gtacTTAGCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCTCCCa                                   <  1:3596818/90‑1 (MQ=255)
                                                  tGCTTACCATGAGATCCTTTTTGAGAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAg                                  <  2:573095/93‑1 (MQ=255)
                                                   gCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGc                                 >  2:8526681/1‑93 (MQ=255)
                                                    cTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCg                                >  1:561633/1‑93 (MQ=255)
                                                    cTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCg                                <  1:3710468/93‑1 (MQ=255)
                                                    cTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCg                                <  1:216381/93‑1 (MQ=255)
                                                     ttACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCgg                               >  2:241377/1‑93 (MQ=255)
                                                     ttACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCgg                               >  2:6623007/1‑93 (MQ=255)
                                                       aCCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGaa                             >  1:7761456/1‑93 (MQ=255)
                                                       aCCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGaa                             <  1:4157211/93‑1 (MQ=255)
                                                        ccATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGaaa                            <  2:2123609/93‑1 (MQ=255)
                                                         cATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAc                           >  1:8742721/1‑93 (MQ=255)
                                                         cATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAc                           >  1:830394/1‑93 (MQ=255)
                                                         cATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAc                           <  1:7930833/93‑1 (MQ=255)
                                                         cATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAc                           <  2:8586154/93‑1 (MQ=255)
                                                          aTGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAcc                          <  1:7421230/93‑1 (MQ=255)
                                                          aTGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAcc                          >  1:5864897/1‑93 (MQ=255)
                                                            gagaTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGc                        >  1:6722846/1‑93 (MQ=255)
                                                             agaTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGct                       <  2:7229404/93‑1 (MQ=255)
                                                              gaTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGctc                      <  1:8425835/93‑1 (MQ=255)
                                                               aTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGctct                     <  2:7555167/93‑1 (MQ=255)
                                                               aTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGctct                     <  1:6546476/93‑1 (MQ=255)
                                                               aTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGctct                     <  1:7117331/93‑1 (MQ=255)
                                                                tCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTa                    >  2:5381751/1‑93 (MQ=255)
                                                                tCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTa                    >  2:5257410/1‑93 (MQ=255)
                                                                tCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTa                    >  2:2616795/1‑93 (MQ=255)
                                                                    ttttGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACaga                >  1:6076998/1‑93 (MQ=255)
                                                                        gAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGtt            <  1:686624/93‑1 (MQ=255)
                                                                         aaaaGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGttt           <  2:205035/93‑1 (MQ=255)
                                                                          aaaGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTa          >  1:4513018/1‑93 (MQ=255)
                                                                           aaGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAATCACCCAGCGGAAACCGCTCTACAGAGGTTTaa         >  1:8493735/1‑93 (MQ=255)
                                                                            aGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTaaa        >  2:7771392/1‑93 (MQ=255)
                                                                            aGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTaaa        >  2:8163295/1‑93 (MQ=255)
                                                                            aGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTaaa        <  1:4827911/93‑1 (MQ=255)
                                                                            aGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTaaa        >  2:7366658/1‑93 (MQ=255)
                                                                            aGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTaaa        >  1:5052480/1‑93 (MQ=255)
                                                                             ggACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAt       >  2:6839566/1‑93 (MQ=255)
                                                                             ggACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAt       >  1:3269445/1‑93 (MQ=255)
                                                                              gACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAtt      >  2:4590171/1‑93 (MQ=255)
                                                                              gACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAtt      >  1:4228308/1‑93 (MQ=255)
                                                                               aCGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAttt     <  2:2928618/93‑1 (MQ=255)
                                                                                  cAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCCCCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCtt  <  1:6413077/93‑1 (MQ=255)
                                                                                       ||                                                                                      
ACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGGCCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTT  >  NC_000913/4007631‑4007805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 314 total aligned reads displayed.
CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGGCCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  NC_000913/4007625‑4007807
                                                                                             |                                                                                         
CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGC                                                                                           >  SRR4302541.8780338/1‑94 (MQ=60)
CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGC                                                                                           >  SRR4302541.2397270/1‑94 (MQ=60)
CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGC                                                                                           >  SRR4302541.6533958/1‑94 (MQ=60)
CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGC                                                                                           >  SRR4302541.6545775/1‑94 (MQ=60)
     CACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCA                                                                                      >  SRR4302541.4269912/1‑94 (MQ=60)
     CACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCA                                                                                      <  SRR4302541.3399278/94‑1 (MQ=60)
     CACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCA                                                                                      >  SRR4302541.1490064/1‑94 (MQ=60)
      CCCGCGGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAG                                                                                     <  SRR4302541.5238632/94‑1 (MQ=60)
      ACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAG                                                                                     <  SRR4302541.5140661/94‑1 (MQ=60)
      ACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAG                                                                                     <  SRR4302541.530543/94‑1 (MQ=60)
       CCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGT                                                                                    >  SRR4302541.5441605/1‑94 (MQ=60)
        CGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTC                                                                                   <  SRR4302541.1041066/94‑1 (MQ=60)
         GCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCG                                                                                  <  SRR4302541.1873139/94‑1 (MQ=60)
         GCCGCGGGCCACCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAATGGACGCAATGCGCTCAGTCG                                                                                  <  SRR4302541.4701359/94‑1 (MQ=60)
          CCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGC                                                                                 <  SRR4302541.1917004/94‑1 (MQ=60)
           CGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCG                                                                                <  SRR4302541.3423021/94‑1 (MQ=60)
           CGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCG                                                                                >  SRR4302541.7197501/1‑94 (MQ=60)
            GCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGC                                                                               >  SRR4302541.6202008/1‑94 (MQ=60)
             CGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCT                                                                              <  SRR4302541.3674079/94‑1 (MQ=60)
             CGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCT                                                                              >  SRR4302541.5596744/1‑94 (MQ=60)
             CGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCT                                                                              >  SRR4302541.8241722/1‑94 (MQ=60)
             CGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCT                                                                              >  SRR4302541.5083836/1‑94 (MQ=60)
             CGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGGAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCT                                                                              >  SRR4302541.5342520/1‑94 (MQ=60)
             CGGGCCATCCTGGCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAACGACGCAATGCGCTCAGTCGCGCT                                                                              <  SRR4302541.1550480/94‑1 (MQ=60)
              GGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTC                                                                             <  SRR4302541.2262850/94‑1 (MQ=60)
              GGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTC                                                                             >  SRR4302541.8350065/1‑94 (MQ=60)
                GCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCA                                                                           >  SRR4302541.2828322/1‑94 (MQ=60)
                 CCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCAC                                                                          >  SRR4302541.1837102/1‑94 (MQ=60)
                 CCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCAC                                                                          <  SRR4302541.472553/94‑1 (MQ=60)
                 CCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCAC                                                                          >  SRR4302541.8275056/1‑94 (MQ=60)
                  CATCCTGTCGAAGTAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACG                                                                         <  SRR4302541.475343/94‑1 (MQ=60)
                  CATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACG                                                                         >  SRR4302541.3580742/1‑94 (MQ=60)
                  CATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACG                                                                         <  SRR4302541.8208480/94‑1 (MQ=60)
                  CATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACG                                                                         >  SRR4302541.3668291/1‑94 (MQ=60)
                   ATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGAGGAAATGCGCTCAGTCGCGCTCCACGC                                                                        >  SRR4302541.4653143/1‑94 (MQ=60)
                   ATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGC                                                                        >  SRR4302541.176784/1‑94 (MQ=60)
                    ctctgtcgaagggggaacgcacTTGGTAATTAAAGGTGCTTACCATGACATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCC                                                                       <  SRR4302541.4219775/72‑1 (MQ=60)
                     CCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTCCCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCA                                                                      <  SRR4302541.3425264/94‑1 (MQ=60)
                     CCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCT                                                                      >  SRR4302541.7553326/1‑94 (MQ=60)
                     CCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCA                                                                      >  SRR4302541.818885/1‑94 (MQ=60)
                      CTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCAT                                                                     >  SRR4302541.1048146/1‑94 (MQ=60)
                        GTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCG                                                                   >  SRR4302541.1365361/1‑94 (MQ=60)
                        GTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCG                                                                   <  SRR4302541.8058254/94‑1 (MQ=60)
                        GTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCG                                                                   <  SRR4302541.7487328/94‑1 (MQ=60)
                          CGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTT                                                                 >  SRR4302541.550293/1‑94 (MQ=60)
                          CGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTT                                                                 >  SRR4302541.1320115/1‑94 (MQ=60)
                          CGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTT                                                                 >  SRR4302541.4231528/1‑94 (MQ=60)
                           GAAGGAGGACGTCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTG                                                                <  SRR4302541.5424444/94‑1 (MQ=60)
                           GAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTG                                                                >  SRR4302541.5685652/1‑94 (MQ=60)
                           GAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTG                                                                >  SRR4302541.6500415/1‑94 (MQ=60)
                           GAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTG                                                                <  SRR4302541.7378916/94‑1 (MQ=60)
                           GAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTG                                                                <  SRR4302541.1518430/94‑1 (MQ=60)
                            AAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGA                                                               >  SRR4302541.1629902/1‑94 (MQ=60)
                            AAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGA                                                               >  SRR4302541.197303/1‑94 (MQ=60)
                             AGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGAT                                                              <  SRR4302541.7496996/94‑1 (MQ=60)
                             AGGAGGACGGCCGTTGATAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGAT                                                              <  SRR4302541.1596727/94‑1 (MQ=60)
                               GAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTT                                                            >  SRR4302541.3724052/1‑94 (MQ=60)
                               GAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTT                                                            <  SRR4302541.1872018/94‑1 (MQ=60)
                               GAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTT                                                            <  SRR4302541.210247/94‑1 (MQ=60)
                               GAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTT                                                            >  SRR4302541.8409423/1‑94 (MQ=60)
                                AGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTT                                                           >  SRR4302541.3813332/1‑94 (MQ=60)
                                 GGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTT                                                          <  SRR4302541.4942762/94‑1 (MQ=60)
                                 GGACGGCCGTTGGTAATTAAAGGGGCTTACCATGAGATCCTTTTTGAAAAGGACGCACTGCGCTCAGTCGCGCTCCTGGCCATCGTTGATTTTT                                                          >  SRR4302541.6546902/1‑94 (MQ=60)
                                   ACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTC                                                        <  SRR4302541.7255827/94‑1 (MQ=60)
                                    CGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCA                                                       <  SRR4302541.2060341/94‑1 (MQ=60)
                                     GGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAA                                                      >  SRR4302541.3521440/1‑94 (MQ=60)
                                     GGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAA                                                      >  SRR4302541.7227262/1‑94 (MQ=60)
                                     GGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAA                                                      >  SRR4302541.1482282/1‑94 (MQ=60)
                                      GCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAC                                                     <  SRR4302541.3021620/94‑1 (MQ=60)
                                      GCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAC                                                     >  SRR4302541.2674734/1‑94 (MQ=60)
                                      GCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAC                                                     >  SRR4302541.6888729/1‑94 (MQ=60)
                                       CCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACA                                                    >  SRR4302541.403570/1‑94 (MQ=60)
                                        CGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAG                                                   <  SRR4302541.1940608/94‑1 (MQ=60)
                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                  <  SRR4302541.4571994/94‑1 (MQ=60)
                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                  <  SRR4302541.8545165/94‑1 (MQ=60)
                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                  >  SRR4302541.4070726/1‑94 (MQ=60)
                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                  <  SRR4302541.6294214/94‑1 (MQ=60)
                                          TTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGC                                                 >  SRR4302541.2178424/1‑94 (MQ=60)
                                           TGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCA                                                >  SRR4302541.8726480/1‑94 (MQ=60)
                                           TGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCA                                                <  SRR4302541.5848331/94‑1 (MQ=60)
                                            GGTAATTAAAGGTGCTTACCATGAGATCCTTGTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCAT                                               <  SRR4302541.1251163/94‑1 (MQ=60)
                                             GTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATA                                              <  SRR4302541.2500278/94‑1 (MQ=60)
                                             GTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATA                                              <  SRR4302541.2491888/94‑1 (MQ=60)
                                              TAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAA                                             >  SRR4302541.1472132/1‑94 (MQ=60)
                                              TAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAA                                             >  SRR4302541.7096504/1‑94 (MQ=60)
                                               AATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC                                            >  SRR4302541.3750078/1‑94 (MQ=60)
                                               AATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC                                            <  SRR4302541.957285/94‑1 (MQ=60)
                                               AATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC                                            >  SRR4302541.3692959/1‑94 (MQ=60)
                                               AATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC                                            >  SRR4302541.1918889/1‑94 (MQ=60)
                                                ATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGTCATAACT                                           >  SRR4302541.7244407/1‑94 (MQ=60)
                                                ATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACT                                           >  SRR4302541.3835964/1‑94 (MQ=60)
                                                 TTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTC                                          >  SRR4302541.1112671/1‑94 (MQ=60)
                                                 TTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTC                                          >  SRR4302541.3478516/1‑94 (MQ=60)
                                                 TTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTC                                          >  SRR4302541.3265939/1‑94 (MQ=60)
                                                 TTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTC                                          >  SRR4302541.3478515/1‑94 (MQ=60)
                                                  TAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCA                                         <  SRR4302541.696952/94‑1 (MQ=60)
                                                   AAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCAC                                        >  SRR4302541.7391415/1‑94 (MQ=60)
                                                   AAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCAC                                        <  SRR4302541.1702988/94‑1 (MQ=60)
                                                   AAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCAC                                        >  SRR4302541.4455005/1‑94 (MQ=60)
                                                    AAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACC                                       <  SRR4302541.1147298/94‑1 (MQ=60)
                                                     AGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCC                                      >  SRR4302541.3208743/1‑94 (MQ=60)
                                                     AGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCC                                      <  SRR4302541.6220609/94‑1 (MQ=60)
                                                     AGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCC                                      <  SRR4302541.8118834/94‑1 (MQ=60)
                                                     AGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCC                                      >  SRR4302541.6934202/1‑94 (MQ=60)
                                                     AGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCC                                      <  SRR4302541.1528411/94‑1 (MQ=60)
                                                      GGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCCCCCA                                     <  SRR4302541.688500/94‑1 (MQ=60)
                                                      GGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCA                                     <  SRR4302541.5813001/94‑1 (MQ=60)
                                                      GGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCA                                     <  SRR4302541.1305123/94‑1 (MQ=60)
                                                      GGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCA                                     <  SRR4302541.248121/94‑1 (MQ=60)
                                                       GTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAG                                    >  SRR4302541.7231986/1‑94 (MQ=60)
                                                        TGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGC                                   <  SRR4302541.4318616/94‑1 (MQ=60)
                                                        TGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGC                                   >  SRR4302541.1810663/1‑94 (MQ=60)
                                                        TGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGC                                   >  SRR4302541.8585046/1‑94 (MQ=60)
                                                         GCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCG                                  >  SRR4302541.566913/1‑94 (MQ=60)
                                                          CTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCTCTCAGTGGCGCTCCACGCCATCTTTGATTTTTTCAACAGGCATAACTCACCCAGCGG                                 <  SRR4302541.3357762/94‑1 (MQ=60)
                                                          CTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGG                                 <  SRR4302541.3747910/94‑1 (MQ=60)
                                                          CTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGG                                 <  SRR4302541.218048/94‑1 (MQ=60)
                                                          CTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGG                                 >  SRR4302541.1723760/1‑94 (MQ=60)
                                                            TACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAA                               >  SRR4302541.7844034/1‑94 (MQ=60)
                                                             ACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAA                              >  SRR4302541.4595166/1‑94 (MQ=60)
                                                              CCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAC                             >  SRR4302541.3932852/1‑94 (MQ=60)
                                                              CCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAC                             >  SRR4302541.8836292/1‑94 (MQ=60)
                                                              CCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAAC                             >  SRR4302541.5525169/1‑94 (MQ=60)
                                                              CCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGC‑GAAACC                            >  SRR4302541.8836433/1‑94 (MQ=60)
                                                               CATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACC                            <  SRR4302541.8018172/94‑1 (MQ=60)
                                                               CATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACC                            >  SRR4302541.8064394/1‑94 (MQ=60)
                                                               CATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACC                            <  SRR4302541.8642390/94‑1 (MQ=60)
                                                               CATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACC                            >  SRR4302541.5924557/1‑94 (MQ=60)
                                                               CATGAGATCCGTGTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACC                            <  SRR4302541.8018173/94‑1 (MQ=60)
                                                                ATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCG                           <  SRR4302541.308558/94‑1 (MQ=60)
                                                                ATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCG                           <  SRR4302541.7500587/94‑1 (MQ=60)
                                                                ATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCG                           <  SRR4302541.572011/94‑1 (MQ=60)
                                                                ATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCG                           <  SRR4302541.8350877/94‑1 (MQ=60)
                                                                 TGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGC                          <  SRR4302541.7271704/94‑1 (MQ=60)
                                                                 TGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGC                          <  SRR4302541.3023513/94‑1 (MQ=60)
                                                                 TGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGC                          >  SRR4302541.6794590/1‑94 (MQ=60)
                                                                  GAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCT                         >  SRR4302541.5426880/1‑94 (MQ=60)
                                                                  GAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCT                         >  SRR4302541.8480358/1‑94 (MQ=60)
                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTC                        <  SRR4302541.1443328/94‑1 (MQ=60)
                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTC                        <  SRR4302541.3636069/94‑1 (MQ=60)
                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTC                        >  SRR4302541.6831665/1‑94 (MQ=60)
                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTC                        >  SRR4302541.5139534/1‑94 (MQ=60)
                                                                    GATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCT                       <  SRR4302541.2873538/94‑1 (MQ=60)
                                                                    GATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCT                       <  SRR4302541.8516902/94‑1 (MQ=60)
                                                                    GATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCT                       <  SRR4302541.6725055/94‑1 (MQ=60)
                                                                     ATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTA                      >  SRR4302541.8366464/1‑94 (MQ=60)
                                                                     ATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTA                      <  SRR4302541.3718454/94‑1 (MQ=60)
                                                                     ATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTA                      >  SRR4302541.6072479/1‑94 (MQ=60)
                                                                     ATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTA                      >  SRR4302541.5745126/1‑94 (MQ=60)
                                                                      TCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTAC                     >  SRR4302541.7771169/1‑94 (MQ=60)
                                                                      TCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTAC                     >  SRR4302541.7991191/1‑94 (MQ=60)
                                                                       CCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACA                    >  SRR4302541.4500735/1‑94 (MQ=60)
                                                                       CCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACA                    <  SRR4302541.6303708/94‑1 (MQ=60)
                                                                        CTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAG                   >  SRR4302541.1260982/1‑94 (MQ=60)
                                                                        CTTTTTGAAAAGCACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTCTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAG                   <  SRR4302541.4062026/94‑1 (MQ=60)
                                                                         TTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGA                  >  SRR4302541.5354642/1‑94 (MQ=60)
                                                                         TTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGA                  <  SRR4302541.4125467/94‑1 (MQ=60)
                                                                         TTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGA                  >  SRR4302541.6139039/1‑94 (MQ=60)
                                                                         TTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGA                  <  SRR4302541.3959066/94‑1 (MQ=60)
                                                                         TTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGA                  >  SRR4302541.3921223/1‑94 (MQ=60)
                                                                          TTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAG                 <  SRR4302541.2949742/94‑1 (MQ=60)
                                                                           TTTTAAAAGGACCCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCGCCCAGCGGAAACCGCTCTACAGAGG                <  SRR4302541.6620635/94‑1 (MQ=60)
                                                                           TTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGG                <  SRR4302541.5890108/94‑1 (MQ=60)
                                                                           TTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGG                <  SRR4302541.6525160/94‑1 (MQ=60)
                                                                            TTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGT               <  SRR4302541.2341587/94‑1 (MQ=60)
                                                                             TGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTT              <  SRR4302541.3188314/94‑1 (MQ=60)
                                                                              GAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTT             >  SRR4302541.618496/1‑94 (MQ=60)
                                                                              GAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTT             >  SRR4302541.6108228/1‑94 (MQ=60)
                                                                               AAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTA            >  SRR4302541.7029123/1‑94 (MQ=60)
                                                                               AAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTA            <  SRR4302541.231370/94‑1 (MQ=60)
                                                                               AAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTA            >  SRR4302541.4558555/1‑94 (MQ=60)
                                                                                AAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAA           <  SRR4302541.863403/94‑1 (MQ=60)
                                                                                 AAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAA          >  SRR4302541.5104464/1‑94 (MQ=60)
                                                                                 AAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAA          >  SRR4302541.3694131/1‑94 (MQ=60)
                                                                                 AAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAA          >  SRR4302541.3262020/1‑94 (MQ=60)
                                                                                 AAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAA          <  SRR4302541.5355891/94‑1 (MQ=60)
                                                                                  AGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAT         <  SRR4302541.8511356/94‑1 (MQ=60)
                                                                                  AGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAT         >  SRR4302541.4745512/1‑94 (MQ=60)
                                                                                  AGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAT         >  SRR4302541.3302430/1‑94 (MQ=60)
                                                                                  AGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAT         <  SRR4302541.4877125/94‑1 (MQ=60)
                                                                                  AGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGGTTAACT         >  SRR4302541.7943236/1‑94 (MQ=60)
                                                                                   GGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGCTTTTTTCACCAGGCATAACTCCCCCAGCGGAACCCGCTCTACAGAGGCTTAAATT        >  SRR4302541.4270425/1‑94 (MQ=60)
                                                                                   GGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATT        <  SRR4302541.2003208/94‑1 (MQ=60)
                                                                                   GGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATT        <  SRR4302541.5612928/94‑1 (MQ=60)
                                                                                   GGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATT        >  SRR4302541.6273616/1‑94 (MQ=60)
                                                                                   GGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTAAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATT        <  SRR4302541.8444767/94‑1 (MQ=60)
                                                                                    GACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTT       <  SRR4302541.5076825/94‑1 (MQ=60)
                                                                                      CGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCT     >  SRR4302541.4657462/1‑94 (MQ=60)
                                                                                        CAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAATAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTA   >  SRR4302541.2141460/1‑94 (MQ=60)
                                                                                        CAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCCCCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTA   <  SRR4302541.6478479/94‑1 (MQ=60)
                                                                                        CAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTGAATTTCTTA   >  SRR4302541.2141458/1‑94 (MQ=60)
                                                                                        CAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTA   >  SRR4302541.7285513/1‑94 (MQ=60)
                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  <  SRR4302541.764569/94‑1 (MQ=60)
                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  SRR4302541.2951370/1‑94 (MQ=60)
                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  SRR4302541.5983052/1‑94 (MQ=60)
                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  SRR4302541.5924970/1‑94 (MQ=60)
                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  <  SRR4302541.6979518/94‑1 (MQ=60)
                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  <  SRR4302541.6710127/94‑1 (MQ=60)
                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  <  SRR4302541.800160/94‑1 (MQ=60)
                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  SRR4302541.409912/1‑94 (MQ=60)
                                                                                             |                                                                                         
CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGGCCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  NC_000913/4007625‑4007807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑