Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,472,408	A→G	intergenic (+117/‑28)	b4251 → / → b4252	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,472,408	0	A	G	99.8%	1547.2 / NA	443	intergenic (+117/‑28)	b4251/b4252	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (241/201); minor base T (1/0); total (242/201)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 450 total aligned reads displayed.

AAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT  >  NC_000913/4472318‑4472497

 aGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgt                                                                                        <  2:3972931/93‑1 (MQ=255)

  gcgcCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgtt                                                                                       >  1:1329072/1‑93 (MQ=255)

  gcgcCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgtt                                                                                       >  2:4720494/1‑93 (MQ=255)

  gcgcCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgtt                                                                                       >  2:776487/1‑93 (MQ=255)

    gcCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttgt                                                                                     <  1:3209261/93‑1 (MQ=255)

     ccTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttgtt                                                                                    <  2:2576568/93‑1 (MQ=255)

      cTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGttt                                                                                   >  2:6146887/1‑93 (MQ=255)

      cTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGttt                                                                                   >  1:4099295/1‑93 (MQ=255)

       tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  >  2:8503202/1‑93 (MQ=255)

       tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  >  2:5105750/1‑93 (MQ=255)

       tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  >  1:4857278/1‑93 (MQ=255)

          cGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaat                                                                               <  1:6652709/93‑1 (MQ=255)

           gATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatt                                                                              >  2:4931895/1‑93 (MQ=255)

           gATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatt                                                                              >  2:1474072/1‑93 (MQ=255)

           gATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatt                                                                              >  1:4624069/1‑93 (MQ=255)

            aTAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatta                                                                             >  1:5149787/1‑93 (MQ=255)

              aaGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAg                                                                           >  2:1860157/1‑93 (MQ=255)

              aaGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTGTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAg                                                                           <  1:5418221/93‑1 (MQ=255)

                gTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGa                                                                         <  2:3182391/93‑1 (MQ=255)

                gTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGa                                                                         >  2:548713/1‑93 (MQ=255)

                 ttGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAg                                                                        >  1:2862846/1‑93 (MQ=255)

                  tgtgATAAGACAATAATTCGCGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGt                                                                       <  1:371981/93‑1 (MQ=255)

                  tgtgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGt                                                                       <  2:6546109/93‑1 (MQ=255)

                   gtgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTg                                                                      >  1:2745638/1‑93 (MQ=255)

                    tgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTgg                                                                     <  1:641209/93‑1 (MQ=255)

                     gATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGa                                                                    >  1:8213029/1‑93 (MQ=255)

                     gATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGa                                                                    >  2:4124871/1‑93 (MQ=255)

                          gACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAga                                                               <  1:584746/93‑1 (MQ=255)

                           aCAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgat                                                              <  2:3809303/93‑1 (MQ=255)

                           aCAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgat                                                              >  1:5617284/1‑93 (MQ=255)

                             aataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatga                                                            >  1:7209585/1‑93 (MQ=255)

                              ataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatgat                                                           <  1:4247613/93‑1 (MQ=255)

                              ataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatgat                                                           >  1:1216543/1‑93 (MQ=255)

                              ataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatgat                                                           >  2:794803/1‑93 (MQ=255)

                               taatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatc                                                          >  2:2941894/1‑93 (MQ=255)

                               taatGCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatc                                                          <  1:2955156/93‑1 (MQ=255)

                                aatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatca                                                         <  2:8195139/93‑1 (MQ=255)

                                  ttCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcatc                                                       <  1:8675780/93‑1 (MQ=255)

                                  ttCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcatc                                                       <  1:2775681/93‑1 (MQ=255)

                                   tCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCg                                                      <  1:7083746/93‑1 (MQ=255)

                                         gTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAata                                                >  2:2391005/1‑93 (MQ=255)

                                         gTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAata                                                >  2:6922127/1‑93 (MQ=255)

                                         gTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAata                                                >  1:5083991/1‑93 (MQ=255)

                                          ttAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               <  2:3630872/93‑1 (MQ=255)

                                          ttAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               <  1:536317/93‑1 (MQ=255)

                                           tAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAtt                                              <  2:4304864/93‑1 (MQ=255)

                                             aGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCa                                            >  1:7528138/1‑93 (MQ=255)

                                             aGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCa                                            <  1:2301999/93‑1 (MQ=255)

                                              ggCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAt                                           <  1:3565749/93‑1 (MQ=255)

                                               gCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATa                                          <  2:1421172/93‑1 (MQ=255)

                                                cTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATaa                                         <  1:6150098/93‑1 (MQ=255)

                                                 tAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAt                                        >  1:4186442/1‑93 (MQ=255)

                                                 tAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAt                                        >  2:2992648/1‑93 (MQ=255)

                                                  aGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATc                                       <  2:8369301/93‑1 (MQ=255)

                                                   gCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCt                                      <  2:2485992/93‑1 (MQ=255)

                                                   gCGGAATTGATTATCTTTTCGCATAACGTTAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCt                                      >  2:2648843/1‑93 (MQ=255)

                                                    cGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCtt                                     <  1:1798404/93‑1 (MQ=255)

                                                     ggAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTc                                    >  1:3957688/1‑93 (MQ=255)

                                                     ggAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTc                                    <  1:788019/93‑1 (MQ=255)

                                                     ggAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTc                                    <  2:4555140/93‑1 (MQ=255)

                                                      gAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCa                                   <  2:6434315/93‑1 (MQ=255)

                                                        aTTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGc                                 >  2:5403463/1‑93 (MQ=255)

                                                         ttGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGcc                                >  1:1000178/1‑93 (MQ=255)

                                                         ttGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGcc                                >  1:1395488/1‑93 (MQ=255)

                                                          tGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCg                               >  1:2073670/1‑93 (MQ=255)

                                                           gATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt                              >  2:1254143/1‑93 (MQ=255)

                                                           gATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt                              >  2:1186583/1‑93 (MQ=255)

                                                           gATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt                              >  2:6203541/1‑93 (MQ=255)

                                                               aTCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCt                          >  2:6402049/1‑93 (MQ=255)

                                                               aTCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCt                          <  1:1130534/93‑1 (MQ=255)

                                                                tCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTa                         >  2:3361759/1‑93 (MQ=255)

                                                                tCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTa                         <  1:1525898/93‑1 (MQ=255)

                                                                tCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTa                         >  2:2791832/1‑93 (MQ=255)

                                                                 cTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAc                        <  2:8594947/93‑1 (MQ=255)

                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  1:7674076/1‑93 (MQ=255)

                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  2:4070909/1‑93 (MQ=255)

                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  1:6744331/1‑93 (MQ=255)

                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  1:8070875/1‑93 (MQ=255)

                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  1:928779/1‑93 (MQ=255)

                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  2:2223870/1‑93 (MQ=255)

                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATAATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  1:1644899/1‑93 (MQ=255)

                                                                    ttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcccc                     <  2:3237810/93‑1 (MQ=255)

                                                                    ttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcccc                     >  1:193192/1‑93 (MQ=255)

                                                                     tCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCa                    >  2:5627600/1‑93 (MQ=255)

                                                                     tCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCa                    <  2:7450935/93‑1 (MQ=255)

                                                                       gTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAgg                  >  1:992743/1‑93 (MQ=255)

                                                                          taACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCTGAAATATTCATAATCTTTACCCGTGGCTACCTCAgtcgt               >  2:7087038/1‑89 (MQ=255)

                                                                          taACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGt               >  1:8352447/1‑93 (MQ=255)

                                                                           aaCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGtt              >  2:483767/1‑93 (MQ=255)

                                                                            aCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTa             >  2:1715658/1‑93 (MQ=255)

                                                                            aCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTa             <  1:3774026/93‑1 (MQ=255)

                                                                            aCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTa             <  1:8514503/93‑1 (MQ=255)

                                                                             cGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAc            <  2:5745028/93‑1 (MQ=255)

                                                                             agATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAGGATTATCATCGGAAATATGCATAATCTTCAGCCGTGGCTACCACAGGAGTTAc            <  1:6935051/92‑1 (MQ=255)

                                                                                tAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGcc         <  2:6995750/93‑1 (MQ=255)

                                                                                 aGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCa        <  1:6260357/93‑1 (MQ=255)

                                                                                 aGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCa        <  1:2412918/93‑1 (MQ=255)

                                                                                 aGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCa        <  2:5931153/93‑1 (MQ=255)

                                                                                   aaaTGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAgg      >  2:4655414/1‑93 (MQ=255)

                                                                                    aaTGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGACATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGc     <  2:5183115/93‑1 (MQ=255)

AAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT  >  NC_000913/4472318‑4472497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 235 total aligned reads displayed.

GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  >  NC_000913/4472315‑4472501

GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAG                                                                                               <  SRR4302541.8474333/94‑1 (MQ=60)

  AAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCG                                                                                             >  SRR4302541.3000349/1‑94 (MQ=60)

  AAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCG                                                                                             >  SRR4302541.719870/1‑94 (MQ=60)

  AAAGCCCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCG                                                                                             <  SRR4302541.719/94‑1 (MQ=60)

   AAGCTCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGT                                                                                            <  SRR4302541.1958721/94‑1 (MQ=60)

   AAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGT                                                                                            <  SRR4302541.93949/94‑1 (MQ=60)

   AAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGT                                                                                            >  SRR4302541.1692256/1‑94 (MQ=60)

    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGCAATGAAGCGTT                                                                                           >  SRR4302541.8726261/1‑94 (MQ=60)

    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           >  SRR4302541.8726258/1‑94 (MQ=60)

    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           >  SRR4302541.1342130/1‑94 (MQ=60)

     GCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTG                                                                                          <  SRR4302541.5166514/94‑1 (MQ=60)

      CGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGT                                                                                         <  SRR4302541.5893205/94‑1 (MQ=60)

      CGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGT                                                                                         >  SRR4302541.1498266/1‑94 (MQ=60)

       GCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTT                                                                                        <  SRR4302541.3241683/94‑1 (MQ=60)

       CCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTT                                                                                        <  SRR4302541.3737319/94‑1 (MQ=60)

        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       >  SRR4302541.5087239/1‑94 (MQ=60)

        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       <  SRR4302541.1825688/94‑1 (MQ=60)

        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       >  SRR4302541.4139766/1‑94 (MQ=60)

        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       >  SRR4302541.4139767/1‑94 (MQ=60)

         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTT                                                                                      >  SRR4302541.4906804/1‑94 (MQ=60)

         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTT                                                                                      >  SRR4302541.6857536/1‑94 (MQ=60)

          TGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTA                                                                                     >  SRR4302541.5999344/1‑94 (MQ=60)

           ccgcataatttcttgtacgtcattaagtcccgcgttcagcctcGCGGAATTGATTATCTTTTCGTATAACGATTGAAATGAAGCGTTGTTTTAA                                                                                    <  SRR4302541.6742021/51‑1 (MQ=60)

           GCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAA                                                                                    <  SRR4302541.3769411/94‑1 (MQ=60)

            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   <  SRR4302541.5166580/94‑1 (MQ=60)

            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   <  SRR4302541.2120256/94‑1 (MQ=60)

             NGNTAAGNTGTGATAAGACANNANTTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  <  SRR4302541.2099827/94‑1 (MQ=60)

             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  <  SRR4302541.2840661/94‑1 (MQ=60)

             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302541.4671091/1‑94 (MQ=60)

             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302541.6315437/1‑94 (MQ=60)

             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  <  SRR4302541.8881113/94‑1 (MQ=60)

             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302541.7530641/1‑94 (MQ=60)

             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  <  SRR4302541.1383446/94‑1 (MQ=60)

              GATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTA                                                                                 >  SRR4302541.6782567/1‑94 (MQ=60)

              GATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTA                                                                                 >  SRR4302541.5202763/1‑94 (MQ=60)

               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                >  SRR4302541.3734575/1‑94 (MQ=60)

               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                <  SRR4302541.1098362/94‑1 (MQ=60)

               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                <  SRR4302541.6016010/94‑1 (MQ=60)

                 AAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTGTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGG                                                                              <  SRR4302541.5473798/94‑1 (MQ=60)

                  AGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGA                                                                             >  SRR4302541.2769916/1‑94 (MQ=60)

                  AGGTGTGGTAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGA                                                                             <  SRR4302541.6859932/94‑1 (MQ=60)

                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            >  SRR4302541.4239076/1‑94 (MQ=60)

                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            >  SRR4302541.2891615/1‑94 (MQ=60)

                    TTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGT                                                                           <  SRR4302541.5423601/94‑1 (MQ=60)

                     TGTGATAAGACAATAATTCGCGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302541.375380/94‑1 (MQ=60)

                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          >  SRR4302541.2773207/1‑94 (MQ=60)

                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302541.2778272/94‑1 (MQ=60)

                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302541.2430166/94‑1 (MQ=60)

                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302541.5231265/94‑1 (MQ=60)

                      GTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGG                                                                         <  SRR4302541.2930706/94‑1 (MQ=60)

                       TGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGA                                                                        <  SRR4302541.647260/94‑1 (MQ=60)

                       TGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGA                                                                        >  SRR4302541.8302631/1‑94 (MQ=60)

                        GATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATTAAGCGTTGTTTTAATTAAGGAGGGGAA                                                                       >  SRR4302541.1142987/1‑94 (MQ=60)

                        GATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAA                                                                       <  SRR4302541.4128076/94‑1 (MQ=60)

                         ATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAA                                                                      >  SRR4302541.3288354/1‑94 (MQ=60)

                         ATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAA                                                                      >  SRR4302541.1628250/1‑94 (MQ=60)

                          TAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAA                                                                     >  SRR4302541.6025156/1‑94 (MQ=60)

                           AAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGAGGAAAAG                                                                    >  SRR4302541.7482749/1‑94 (MQ=60)

                            AGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGA                                                                   >  SRR4302541.1342626/1‑94 (MQ=60)

                            AGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGA                                                                   >  SRR4302541.7313722/1‑94 (MQ=60)

                            AGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGA                                                                   >  SRR4302541.8127194/1‑94 (MQ=60)

                            AGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGA                                                                   >  SRR4302541.4286502/1‑94 (MQ=60)

                            AGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGA                                                                   >  SRR4302541.4643142/1‑94 (MQ=60)

                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302541.4702247/94‑1 (MQ=60)

                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302541.504664/94‑1 (MQ=60)

                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  >  SRR4302541.8737428/1‑94 (MQ=60)

                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302541.590254/94‑1 (MQ=60)

                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302541.942983/94‑1 (MQ=60)

                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  >  SRR4302541.5674771/1‑94 (MQ=60)

                              GCAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 <  SRR4302541.3439241/94‑1 (MQ=60)

                              ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 <  SRR4302541.4972828/94‑1 (MQ=60)

                                AATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGAT                                                               >  SRR4302541.1228431/1‑94 (MQ=60)

                                AATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGAT                                                               >  SRR4302541.186068/1‑94 (MQ=60)

                                AATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGAT                                                               <  SRR4302541.1385718/94‑1 (MQ=60)

                                AAGAATTCACGCGTTAAGGCTAGCTGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGAT                                                               <  SRR4302541.3766128/94‑1 (MQ=60)

                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              >  SRR4302541.2861651/1‑94 (MQ=60)

                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              <  SRR4302541.4290044/94‑1 (MQ=60)

                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              <  SRR4302541.2381307/94‑1 (MQ=60)

                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              >  SRR4302541.5777241/1‑94 (MQ=60)

                                  TAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCA                                                             >  SRR4302541.392127/1‑94 (MQ=60)

                                  TAATGCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCA                                                             <  SRR4302541.2984863/94‑1 (MQ=60)

                                   AATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCAT                                                            <  SRR4302541.1344564/94‑1 (MQ=60)

                                    ATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATC                                                           >  SRR4302541.1168534/1‑94 (MQ=60)

                                    ATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATC                                                           >  SRR4302541.7043958/1‑94 (MQ=60)

                                     TTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCG                                                          <  SRR4302541.2803646/94‑1 (MQ=60)

                                     TTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCG                                                          <  SRR4302541.8768610/94‑1 (MQ=60)

                                     TTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCG                                                          <  SRR4302541.3690517/94‑1 (MQ=60)

                                     TTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCG                                                          <  SRR4302541.2885692/94‑1 (MQ=60)

                                      TCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGG                                                         <  SRR4302541.8081273/94‑1 (MQ=60)

                                      TCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGG                                                         >  SRR4302541.2983729/1‑94 (MQ=60)

                                      TCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGG                                                         <  SRR4302541.7159093/94‑1 (MQ=60)

                                        ACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAA                                                       >  SRR4302541.5313099/1‑94 (MQ=60)

                                         CGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAA                                                      <  SRR4302541.2497466/94‑1 (MQ=60)

                                         CGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAA                                                      >  SRR4302541.6805922/1‑94 (MQ=60)

                                           CGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATA                                                    >  SRR4302541.415846/1‑94 (MQ=60)

                                           CGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATA                                                    >  SRR4302541.5136219/1‑94 (MQ=60)

                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   >  SRR4302541.7225548/1‑94 (MQ=60)

                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   <  SRR4302541.4855637/94‑1 (MQ=60)

                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   >  SRR4302541.2276442/1‑94 (MQ=60)

                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   >  SRR4302541.8282331/1‑94 (MQ=60)

                                             TTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATT                                                  <  SRR4302541.541345/94‑1 (MQ=60)

                                             TTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATT                                                  >  SRR4302541.5542504/1‑94 (MQ=60)

                                               AAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCA                                                >  SRR4302541.7608589/1‑94 (MQ=60)

                                                AGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAT                                               <  SRR4302541.6635397/94‑1 (MQ=60)

                                                AGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAT                                               <  SRR4302541.2324334/94‑1 (MQ=60)

                                                AGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAT                                               >  SRR4302541.639766/1‑94 (MQ=60)

                                                AGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAT                                               <  SRR4302541.8363750/94‑1 (MQ=60)

                                                 GGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATA                                              >  SRR4302541.8472598/1‑94 (MQ=60)

                                                 GGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATA                                              <  SRR4302541.3601854/94‑1 (MQ=60)

                                                  GCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAA                                             <  SRR4302541.171658/94‑1 (MQ=60)

                                                  GCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAA                                             <  SRR4302541.7937909/94‑1 (MQ=60)

                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302541.447040/94‑1 (MQ=60)

                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302541.6212929/94‑1 (MQ=60)

                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302541.7213077/94‑1 (MQ=60)

                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302541.1063367/94‑1 (MQ=60)

                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302541.5142779/94‑1 (MQ=60)

                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            >  SRR4302541.4227986/1‑94 (MQ=60)

                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            >  SRR4302541.2802297/1‑94 (MQ=60)

                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            >  SRR4302541.2802298/1‑94 (MQ=60)

                                                     AGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCT                                          >  SRR4302541.3081329/1‑94 (MQ=60)

                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        >  SRR4302541.7847784/1‑94 (MQ=60)

                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        >  SRR4302541.3997018/1‑94 (MQ=60)

                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        >  SRR4302541.200949/1‑94 (MQ=60)

                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        <  SRR4302541.1815862/94‑1 (MQ=60)

                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       <  SRR4302541.3374482/94‑1 (MQ=60)

                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       <  SRR4302541.8318524/94‑1 (MQ=60)

                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       <  SRR4302541.5669557/94‑1 (MQ=60)

                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       <  SRR4302541.4190518/94‑1 (MQ=60)

                                                         GAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAG                                      <  SRR4302541.8582580/94‑1 (MQ=60)

                                                         GAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAG                                      <  SRR4302541.6442443/94‑1 (MQ=60)

                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     <  SRR4302541.1668524/94‑1 (MQ=60)

                                                           ATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302541.3823483/1‑94 (MQ=60)

                                                           ATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302541.1009480/1‑94 (MQ=60)

                                                           ATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302541.1409154/1‑94 (MQ=60)

                                                           ATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302541.8190421/1‑94 (MQ=60)

                                                            TTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCG                                   >  SRR4302541.909583/1‑94 (MQ=60)

                                                            TTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCG                                   >  SRR4302541.2093717/1‑94 (MQ=60)

                                                             TGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGT                                  >  SRR4302541.6812398/1‑94 (MQ=60)

                                                              GATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTG                                 >  SRR4302541.1855564/1‑94 (MQ=60)

                                                               ATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGG                                >  SRR4302541.4033860/1‑94 (MQ=60)

                                                               ATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGG                                >  SRR4302541.4595379/1‑94 (MQ=60)

                                                               ATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGG                                <  SRR4302541.3930118/94‑1 (MQ=60)

                                                                TTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGC                               >  SRR4302541.6372476/1‑94 (MQ=60)

                                                                 TATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCT                              >  SRR4302541.7519383/1‑94 (MQ=60)

                                                                 TATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCT                              <  SRR4302541.3772594/94‑1 (MQ=60)

                                                                 TATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCT                              <  SRR4302541.6569799/94‑1 (MQ=60)

                                                                  ATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTA                             >  SRR4302541.8493733/1‑94 (MQ=60)

                                                                  ATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTA                             <  SRR4302541.1141224/94‑1 (MQ=60)

                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            <  SRR4302541.1541153/94‑1 (MQ=60)

                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            <  SRR4302541.4394259/94‑1 (MQ=60)

                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTATC                           >  SRR4302541.3172627/1‑94 (MQ=60)

                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           >  SRR4302541.6816387/1‑94 (MQ=60)

                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           >  SRR4302541.7755674/1‑94 (MQ=60)

                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           >  SRR4302541.937536/1‑94 (MQ=60)

                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           >  SRR4302541.5232472/1‑94 (MQ=60)

                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           >  SRR4302541.8159478/1‑94 (MQ=60)

                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATAATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           >  SRR4302541.1661157/1‑94 (MQ=60)

                                                                     TTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC                          >  SRR4302541.1206606/1‑94 (MQ=60)

                                                                      TTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCC                         <  SRR4302541.706818/94‑1 (MQ=60)

                                                                      TTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCC                         >  SRR4302541.194659/1‑94 (MQ=60)

                                                                        TCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAG                       >  SRR4302541.1467294/1‑94 (MQ=60)

                                                                        TCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAG                       <  SRR4302541.8914561/94‑1 (MQ=60)

                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      >  SRR4302541.1001986/1‑94 (MQ=60)

                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      <  SRR4302541.7820576/94‑1 (MQ=60)

                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      <  SRR4302541.7820575/94‑1 (MQ=60)

                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      <  SRR4302541.124223/94‑1 (MQ=60)

                                                                          GTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGA                     >  SRR4302541.2688403/1‑94 (MQ=60)

                                                                           TATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAG                    >  SRR4302541.3890769/1‑94 (MQ=60)

                                                                           TATAACGATAGAAATGAAGCGTTGTTCTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAG                    <  SRR4302541.4239846/94‑1 (MQ=60)

                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGT                   >  SRR4302541.8443086/1‑94 (MQ=60)

                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGT                   >  SRR4302541.1571599/1‑94 (MQ=60)

                                                                             TAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTT                  >  SRR4302541.542582/1‑94 (MQ=60)

                                                                             TAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTT                  <  SRR4302541.6267435/94‑1 (MQ=60)

                                                                             TAACGATAGAAATGAAGCGGGGGGTTAATTAAGGAGGGGAAAAGATGATCATCGGAAATAATCATAATCATCAGCCGTGGCCACCCCAGGAGTT                  >  SRR4302541.6777589/1‑94 (MQ=55)

                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                >  SRR4302541.4814897/1‑94 (MQ=60)

                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                <  SRR4302541.1028624/94‑1 (MQ=60)

                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                <  SRR4302541.8606157/94‑1 (MQ=60)

                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                >  SRR4302541.8501388/1‑94 (MQ=60)

                                                                                CGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACG               <  SRR4302541.7633822/94‑1 (MQ=60)

                                                                                AGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAGGATTATCATCGGAAATATGCATAATCTTCAGCCGTGGCTACCACAGGAGTTACG               <  SRR4302541.7009042/94‑1 (MQ=60)

                                                                                 GATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGGTACGC              >  SRR4302541.8018953/1‑94 (MQ=60)

                                                                                   TAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCA            <  SRR4302541.7712384/94‑1 (MQ=60)

                                                                                    AGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAG           >  SRR4302541.5476760/1‑94 (MQ=60)

                                                                                    AGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAG           <  SRR4302541.6324293/94‑1 (MQ=60)

                                                                                    AGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAG           <  SRR4302541.2436660/94‑1 (MQ=60)

                                                                                     GAAATGAGGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGG          <  SRR4302541.8300498/94‑1 (MQ=60)

                                                                                      AAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGC         <  SRR4302541.6708786/94‑1 (MQ=60)

                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        >  SRR4302541.1546818/1‑94 (MQ=60)

                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        <  SRR4302541.709171/94‑1 (MQ=60)

                                                                                        ATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGT       >  SRR4302541.2416258/1‑94 (MQ=60)

                                                                                        ATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGA       >  SRR4302541.2246874/1‑94 (MQ=60)

                                                                                         TGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT      >  SRR4302541.1260062/1‑94 (MQ=60)

                                                                                          GAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATT     >  SRR4302541.6093835/1‑94 (MQ=60)

                                                                                          GAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATT     >  SRR4302541.4404609/1‑94 (MQ=60)

                                                                                          GAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATT     <  SRR4302541.5851101/94‑1 (MQ=60)

                                                                                           AAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTG    >  SRR4302541.8076494/1‑94 (MQ=60)

                                                                                            AGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGA   <  SRR4302541.5306400/94‑1 (MQ=60)

                                                                                            AGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGA   >  SRR4302541.6570077/1‑94 (MQ=60)

                                                                                            AGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGA   <  SRR4302541.6287454/94‑1 (MQ=60)

                                                                                             GCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  <  SRR4302541.556528/94‑1 (MQ=60)

GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  >  NC_000913/4472315‑4472501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`