Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,474,826 |
+A |
intergenic (+1/+44) |
yjgL → / ← argI |
hypothetical protein/ornithine carbamoyltransferase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,474,823 | 1 | . | A | 99.2%
| 890.4
/ ‑1.2
| 250 | coding (1849/1851 nt) | yjgL | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base A (147/101); total (149/101) |
| Fisher's exact test for biased strand distribution p-value = 5.16e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01 |
Only 100 of 270 total aligned reads displayed.
TTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAA‑TAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT > NC_000913/4474731‑4474910
|
aaTGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aa > 2:2448938/1‑93 (MQ=255)
tGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aaaa > 2:5191840/1‑92 (MQ=255)
tGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aaaa > 1:561779/1‑92 (MQ=255)
aCAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aaaataa > 1:6081954/1‑89 (MQ=255)
aGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAAtg > 1:5028921/1‑93 (MQ=255)
aGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAAtg > 1:7266094/1‑93 (MQ=255)
aGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAAtg > 2:3683632/1‑93 (MQ=255)
aGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAAtg > 1:2723365/1‑93 (MQ=255)
gCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAAtgt > 2:7562592/1‑93 (MQ=255)
gCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAAtgt > 2:3804280/1‑93 (MQ=255)
gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGGCCTATCACTGCATAAAA‑TAATGTGa > 1:310965/1‑93 (MQ=255)
gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGa > 1:6982512/1‑93 (MQ=255)
gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGa > 1:8378712/1‑93 (MQ=255)
gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGa > 1:2446873/1‑93 (MQ=255)
tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGAt > 1:3081499/1‑93 (MQ=255)
tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGAt > 1:3316890/1‑93 (MQ=255)
tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGAt > 2:5925318/1‑93 (MQ=255)
tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGAt > 2:1514259/1‑93 (MQ=255)
ttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATg > 1:3905083/1‑93 (MQ=255)
aataaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCg < 1:8509184/93‑1 (MQ=255)
taaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCggg > 1:5726922/1‑93 (MQ=255)
aaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGAt > 2:7304982/1‑93 (MQ=255)
aCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATg < 1:7623971/93‑1 (MQ=255)
aCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATg < 2:912495/93‑1 (MQ=255)
aCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATg > 2:320808/1‑93 (MQ=255)
aCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATg > 2:7902470/1‑93 (MQ=255)
tAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGt < 2:1168458/93‑1 (MQ=255)
tAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGt > 2:5456873/1‑93 (MQ=255)
aaaTCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATggct > 2:4244897/1‑91 (MQ=255)
aaaTCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGAGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGtt < 1:7415048/93‑1 (MQ=255)
aaTCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGttt < 2:3641214/93‑1 (MQ=255)
aaTCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGttt > 1:7049201/1‑93 (MQ=255)
tCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgt > 1:463225‑M1/1‑91 (MQ=255)
tCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgt < 1:1872316‑M1/93‑3 (MQ=255)
tCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgt > 1:5937931‑M1/1‑91 (MQ=255)
tCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgt < 1:6213437‑M1/93‑3 (MQ=255)
ccACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgta < 1:1081891‑M1/93‑4 (MQ=255)
aCCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatt < 1:7615878‑M1/93‑6 (MQ=255)
ccGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtattt > 1:128046‑M1/1‑87 (MQ=255)
gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc < 2:8537552‑M1/93‑10 (MQ=255)
gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc > 1:2134528‑M1/1‑84 (MQ=255)
gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc < 2:6573747‑M1/93‑10 (MQ=255)
aaaTTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccgg > 1:3052342‑M1/1‑82 (MQ=255)
aaTTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggc < 1:1043195‑M1/93‑13 (MQ=255)
aCGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctt > 1:5914756‑M1/1‑76 (MQ=255)
cGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttt < 2:484080‑M1/93‑19 (MQ=255)
gTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta > 2:612705‑M1/1‑74 (MQ=255)
gTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta > 1:7697874‑M1/1‑74 (MQ=255)
gTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta < 2:6673565‑M1/93‑20 (MQ=255)
tataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat < 1:1474681‑M1/93‑21 (MQ=255)
tataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat > 2:4790586‑M1/1‑73 (MQ=255)
ataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata < 1:6151364‑M1/93‑22 (MQ=255)
ataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata < 1:412526‑M1/93‑22 (MQ=255)
ataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata < 2:189742‑M1/93‑22 (MQ=255)
aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata > 2:4541887‑M1/1‑66 (MQ=255)
aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata > 2:3975209‑M1/1‑66 (MQ=255)
aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata > 1:3464661‑M1/1‑66 (MQ=255)
aGAACACTTTGGGTTGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttctcggcatctttatagcgataga > 1:2353954‑M1/1‑64 (MQ=255)
aGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > 1:1440304‑M1/1‑64 (MQ=255)
aGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc < 1:8695382‑M1/93‑30 (MQ=255)
aGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgataga > 2:3066383‑M1/1‑64 (MQ=255)
acacTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat < 1:4899588‑M1/93‑33 (MQ=255)
cacTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt > 1:812277‑M1/1‑60 (MQ=255)
cacTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt < 1:5986603‑M1/93‑34 (MQ=255)
acTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatta > 2:161425‑M1/1‑59 (MQ=255)
tGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattta > 2:2302490‑M1/1‑55 (MQ=255)
gggTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac < 2:549303‑M1/93‑40 (MQ=255)
gggTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac > 2:560905‑M1/1‑54 (MQ=255)
gggTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac > 2:3465692‑M1/1‑54 (MQ=255)
tGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > 2:4395920‑M1/1‑51 (MQ=255)
tGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga < 1:6891861‑M1/93‑43 (MQ=255)
ggAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag > 1:357281‑M1/1‑50 (MQ=255)
ggAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag < 1:6381783‑M1/93‑44 (MQ=255)
gaagaaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagc > 1:2923026‑M1/1‑49 (MQ=255)
aagaaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcg < 1:6255840‑M1/93‑46 (MQ=255)
aagaaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcg > 2:6886954‑M1/1‑48 (MQ=255)
agaaTAGCCCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtattttccggcatctttatagcgatagcaattatttactgagcgt > 2:1358233‑M1/1‑47 (MQ=255)
agaaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgt < 1:7191696‑M1/93‑47 (MQ=255)
aaTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcg < 2:8732241‑M1/93‑49 (MQ=255)
aTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgc > 1:1638666‑M1/1‑44 (MQ=255)
aTAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgc < 1:2217612‑M1/93‑50 (MQ=255)
aGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcga > 2:1037691‑M1/1‑42 (MQ=255)
gACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgac > 2:2829178‑M1/1‑41 (MQ=255)
aCCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgacc < 1:5299035‑M1/93‑54 (MQ=255)
ccTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgacca > 1:3902928‑M1/1‑39 (MQ=255)
ccTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgacca < 1:8300795‑M1/93‑55 (MQ=255)
cTATCACTGCAT‑AAAGTAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccat > 1:8587707‑M1/1‑38 (MQ=255)
tATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatc > 1:4437231‑M1/1‑37 (MQ=255)
tATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatc > 2:4088806‑M1/1‑37 (MQ=255)
tATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatc > 2:1089133‑M1/1‑37 (MQ=255)
tATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatc < 2:2022014‑M1/93‑57 (MQ=255)
tATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtagcgaccatc > 2:828600‑M1/1‑37 (MQ=255)
tCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcac < 1:4389366‑M1/93‑59 (MQ=255)
tCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcac < 2:390581‑M1/93‑59 (MQ=255)
tCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcac > 2:2572746‑M1/1‑35 (MQ=255)
aCTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccg > 1:7970798‑M1/1‑33 (MQ=255)
cTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgc < 2:6762892‑M1/93‑62 (MQ=255)
cTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgc < 2:8165142‑M1/93‑62 (MQ=255)
cTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgc > 1:6517463‑M1/1‑32 (MQ=255)
tGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtcgcgaccatcaccgct < 1:3760236‑M1/93‑63 (MQ=255)
|
TTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAA‑TAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT > NC_000913/4474731‑4474910
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A‑TAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGT > NC_000913/4474733‑4474908
|
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A > SRR4302541.3707140/1‑94 (MQ=60)
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A > SRR4302541.8173096/1‑94 (MQ=60)
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A > SRR4302541.2353249/1‑94 (MQ=60)
ATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A‑A > SRR4302541.8418049/1‑94 (MQ=60)
ATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A‑A > SRR4302541.567060/1‑94 (MQ=60)
TGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aat < SRR4302541.1482807/94‑3 (MQ=60)
GAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aata < SRR4302541.1370654/94‑4 (MQ=60)
GAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aata < SRR4302541.7593065/94‑4 (MQ=60)
GAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aata > SRR4302541.7847178/1‑91 (MQ=60)
AACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAA > SRR4302541.523776/1‑94 (MQ=60)
AACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAA > SRR4302541.6144038/1‑94 (MQ=60)
AACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAA > SRR4302541.7420524/1‑94 (MQ=60)
CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATG > SRR4302541.7343606/1‑94 (MQ=60)
CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATG > SRR4302541.2750568/1‑94 (MQ=60)
CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATG > SRR4302541.5080636/1‑94 (MQ=60)
CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATG > SRR4302541.7701224/1‑94 (MQ=60)
AGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGT < SRR4302541.4825960/94‑1 (MQ=60)
AGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGT > SRR4302541.8694871/1‑94 (MQ=60)
GCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTG > SRR4302541.7447835/1‑94 (MQ=60)
GCGTTGAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTG < SRR4302541.5375712/94‑1 (MQ=60)
CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGGCCTATCACTGCATAAA‑A‑TAATGTGA > SRR4302541.313725/1‑94 (MQ=60)
CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGA > SRR4302541.7056889/1‑94 (MQ=60)
CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGA > SRR4302541.8469477/1‑94 (MQ=60)
CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGA > SRR4302541.5703688/1‑94 (MQ=60)
CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGA > SRR4302541.2471176/1‑94 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGCAGAATAGCCCTATCACTGCATAAA‑A‑TAATGTGAT > SRR4302541.113024/1‑94 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGAT > SRR4302541.3350171/1‑94 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGAT > SRR4302541.3866690/1‑94 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGAT < SRR4302541.2464281/94‑1 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGAT > SRR4302541.704524/1‑94 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGAT > SRR4302541.3112772/1‑94 (MQ=60)
GTTTAAATAAACTAAATCAACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AACA‑TAATGTGAT > SRR4302541.3977905/1‑94 (MQ=60)
TTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATG > SRR4302541.3383702/1‑94 (MQ=60)
TTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATG > SRR4302541.3944127/1‑94 (MQ=60)
TTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATG < SRR4302541.4677593/94‑1 (MQ=60)
TTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGC > SRR4302541.3009247/1‑94 (MQ=60)
TTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGC < SRR4302541.608258/94‑1 (MQ=60)
AAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCG > SRR4302541.3941986/1‑94 (MQ=60)
AATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGG < SRR4302541.8600800/94‑1 (MQ=60)
AATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGG > SRR4302541.5681057/1‑94 (MQ=60)
ATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGG > SRR4302541.5785302/1‑94 (MQ=60)
TAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGT > SRR4302541.7257921/1‑94 (MQ=60)
TAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGA > SRR4302541.7257920/1‑94 (MQ=60)
ACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGG < SRR4302541.7705359/94‑1 (MQ=60)
CTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGT > SRR4302541.3146321/1‑94 (MQ=60)
TAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTT < SRR4302541.7837010/94‑1 (MQ=60)
AAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTT > SRR4302541.7124174/1‑94 (MQ=60)
AAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGAGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTT < SRR4302541.7494344/94‑1 (MQ=60)
ATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgt > SRR4302541.5998430/1‑92 (MQ=60)
ATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgt > SRR4302541.467632/1‑92 (MQ=60)
TCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgta < SRR4302541.6276934/94‑4 (MQ=60)
TCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgta < SRR4302541.1890336/94‑4 (MQ=60)
CCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtat < SRR4302541.1091985/94‑5 (MQ=60)
CCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtat > SRR4302541.444615/1‑90 (MQ=60)
CACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatt > SRR4302541.3127924/1‑89 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtattt > SRR4302541.129057/1‑88 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtattt < SRR4302541.7697232/94‑7 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtattt < SRR4302541.6681261/94‑7 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtattc > SRR4302541.6745928/1‑88 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttccg > SRR4302541.1248733/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttccc > SRR4302541.5388520/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttccc < SRR4302541.6007750/94‑10 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttccc > SRR4302541.7587495/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttccc > SRR4302541.2155172/1‑85 (MQ=60)
GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccg < SRR4302541.1863406/94‑11 (MQ=60)
GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccg > SRR4302541.8454449/1‑84 (MQ=60)
AAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccgg > SRR4302541.3083240/1‑83 (MQ=60)
AAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggc > SRR4302541.1326658/1‑82 (MQ=60)
AATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggca < SRR4302541.1052863/94‑14 (MQ=60)
AATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggca > SRR4302541.3120936/1‑81 (MQ=60)
AATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggca > SRR4302541.1506863/1‑81 (MQ=60)
ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcat > SRR4302541.6466332/1‑80 (MQ=60)
ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcat > SRR4302541.6439931/1‑80 (MQ=60)
TACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctt > SRR4302541.5974971/1‑77 (MQ=60)
ACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttt < SRR4302541.8158996/94‑19 (MQ=60)
CGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta > SRR4302541.7779733/1‑75 (MQ=60)
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata < SRR4302541.1489147/94‑22 (MQ=60)
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata > SRR4302541.5989706/1‑73 (MQ=60)
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata > SRR4302541.5989708/1‑73 (MQ=60)
ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag < SRR4302541.6214212/94‑23 (MQ=60)
ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag < SRR4302541.416348/94‑23 (MQ=60)
ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag > SRR4302541.3005435/1‑72 (MQ=60)
TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc > SRR4302541.2226107/1‑71 (MQ=60)
GCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgt < SRR4302541.7778811/94‑26 (MQ=60)
CAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat > SRR4302541.8544065/1‑68 (MQ=60)
CAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat < SRR4302541.7115428/94‑27 (MQ=60)
AATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata < SRR4302541.4861505/94‑28 (MQ=60)
AATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata > SRR4302541.3499300/1‑67 (MQ=60)
TAGAACACTTTGGGTTGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttctcggcatctttatagcgataga > SRR4302541.2376869/1‑65 (MQ=60)
TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > SRR4302541.452787/1‑65 (MQ=60)
TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > SRR4302541.6235903/1‑65 (MQ=60)
TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > SRR4302541.1454317/1‑65 (MQ=60)
AGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca < SRR4302541.8788451/94‑31 (MQ=60)
AGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca < SRR4302541.4207728/94‑31 (MQ=60)
GAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaa < SRR4302541.217410/94‑32 (MQ=60)
GAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaa < SRR4302541.4059891/94‑32 (MQ=60)
ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt > SRR4302541.819701/1‑61 (MQ=60)
ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt < SRR4302541.4949582/94‑34 (MQ=60)
CACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatta < SRR4302541.2412289/94‑35 (MQ=60)
CACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatta < SRR4302541.6047903/94‑35 (MQ=60)
ACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattat < SRR4302541.2818/94‑36 (MQ=60)
CTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatt > SRR4302541.6197937/1‑58 (MQ=60)
TGGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac < SRR4302541.2862243/94‑40 (MQ=60)
GGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact < SRR4302541.2263362/94‑41 (MQ=60)
GGGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact < SRR4302541.3924157/94‑41 (MQ=60)
GGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg > SRR4302541.8480547/1‑53 (MQ=60)
GGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg < SRR4302541.6275586/94‑42 (MQ=60)
GGTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg > SRR4302541.600471/1‑53 (MQ=60)
GTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga < SRR4302541.7779216/94‑43 (MQ=60)
GTGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > SRR4302541.1586488/1‑52 (MQ=60)
TGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag > SRR4302541.5953071/1‑51 (MQ=60)
TGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag > SRR4302541.360512/1‑51 (MQ=60)
TGGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag < SRR4302541.6965416/94‑44 (MQ=60)
GGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagc < SRR4302541.6446965/94‑45 (MQ=60)
GGAAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagc > SRR4302541.2952423/1‑50 (MQ=60)
GAAGAATAGTCCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcg > SRR4302541.6305033/1‑49 (MQ=60)
AAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgt < SRR4302541.3531960/94‑47 (MQ=60)
AAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgt > SRR4302541.506760/1‑48 (MQ=60)
AAGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgt < SRR4302541.6319741/94‑47 (MQ=60)
AGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtc < SRR4302541.3327962/94‑48 (MQ=60)
AGAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtc < SRR4302541.7268406/94‑48 (MQ=60)
GAATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCG < SRR4302541.6376892/94‑1 (MQ=30)
AATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGC > SRR4302541.1654877/1‑94 (MQ=28)
ATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCG < SRR4302541.3516925/94‑1 (MQ=26)
ATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCG < SRR4302541.2239115/94‑1 (MQ=26)
ATAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCG > SRR4302541.1064698/1‑94 (MQ=26)
TAGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGA > SRR4302541.170613/1‑94 (MQ=25)
AGACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATACCA‑ATTATTTACTGAGCGTCGCGAC > SRR4302541.952878/1‑94 (MQ=23)
ACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCA > SRR4302541.3941967/1‑94 (MQ=23)
ACCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCA < SRR4302541.5353577/94‑1 (MQ=23)
CCTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCAT < SRR4302541.8391051/94‑1 (MQ=23)
CCTATCACTGCAT‑AA‑AGTAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCAT > SRR4302541.8679884/1‑94 (MQ=23)
CTATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATC > SRR4302541.4481835/1‑94 (MQ=23)
TATCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCA > SRR4302541.1969558/1‑94 (MQ=23)
TCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC < SRR4302541.8333602/94‑1 (MQ=23)
TCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC < SRR4302541.4433271/94‑1 (MQ=23)
TCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC < SRR4302541.4433272/94‑1 (MQ=23)
TCACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC < SRR4302541.3096390/94‑1 (MQ=23)
CACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCG < SRR4302541.7058721/94‑1 (MQ=23)
CACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCG > SRR4302541.8058638/1‑94 (MQ=23)
CACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCG > SRR4302541.5289788/1‑94 (MQ=23)
ACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGC > SRR4302541.7279158/1‑94 (MQ=23)
ACTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGC > SRR4302541.6583967/1‑94 (MQ=23)
CTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCT > SRR4302541.2557570/1‑94 (MQ=25)
CTGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCT > SRR4302541.8719114/1‑94 (MQ=25)
TGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT > SRR4302541.932997/1‑94 (MQ=26)
TGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT > SRR4302541.1834900/1‑94 (MQ=26)
TGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT < SRR4302541.3798018/94‑1 (MQ=26)
TGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT > SRR4302541.4720154/1‑94 (MQ=26)
TGCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT > SRR4302541.681467/1‑94 (MQ=26)
GCATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTT < SRR4302541.5070730/94‑1 (MQ=28)
CATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTG < SRR4302541.3712178/94‑1 (MQ=30)
CATAAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTG > SRR4302541.259572/1‑94 (MQ=30)
ataAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA < SRR4302541.8313156/91‑1 (MQ=33)
ataAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA > SRR4302541.5491823/4‑94 (MQ=33)
ataAA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA > SRR4302541.7580347/4‑94 (MQ=33)
A‑AA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATA < SRR4302541.5126128/94‑1 (MQ=36)
AA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG < SRR4302541.3605955/94‑1 (MQ=38)
AA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG < SRR4302541.3216418/94‑1 (MQ=38)
AA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG > SRR4302541.5096756/1‑94 (MQ=38)
AA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG < SRR4302541.8890563/94‑1 (MQ=38)
AA‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG > SRR4302541.7180695/1‑94 (MQ=38)
A‑A‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGT > SRR4302541.3563530/1‑94 (MQ=38)
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AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A‑TAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGT > NC_000913/4474733‑4474908
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
