Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,478,503 (A)7→6 intergenic (+12/+47) yjgN → / ← valS hypothetical protein/valine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,478,4970A.100.0% 1406.3 / NA 300intergenic (+6/+53)yjgN/valShypothetical protein/valine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (161/139);  total (161/139)

Only 100 of 353 total aligned reads displayed.

CCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT  >  NC_000913/4478405‑4478587
                                                                                            |                                                                                          
ccttTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATa                                                                                            >  1:7254124/1‑93 (MQ=255)
 cttTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaa                                                                                           <  1:3741737/93‑1 (MQ=255)
  tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaa                                                                                          >  1:896503/1‑93 (MQ=255)
  tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaa                                                                                          >  2:706779/1‑93 (MQ=255)
   ttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaa                                                                                         <  2:5449819/93‑1 (MQ=255)
   ttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaa                                                                                         <  1:6485016/93‑1 (MQ=255)
     aaTCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaa                                                                                       <  2:7721185/93‑1 (MQ=255)
     aaTCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaa                                                                                       >  1:2446961/1‑93 (MQ=255)
      aTCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaag                                                                                      <  2:3820135/93‑2 (MQ=255)
      aTCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaag                                                                                      <  2:269348/93‑2 (MQ=255)
       tCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaagg                                                                                     >  2:445546/1‑91 (MQ=255)
        cAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaaggc                                                                                    >  2:6849772/1‑90 (MQ=255)
         aaTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaaggcc                                                                                   >  1:3367182/1‑89 (MQ=255)
         aaTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATaaaaaaggcc                                                                                   >  1:5185516/1‑89 (MQ=255)
          aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCg                                                                                 <  2:5829575/93‑1 (MQ=255)
          aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCg                                                                                 >  2:7177927/1‑93 (MQ=255)
            aaaGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGa                                                                               <  2:6411468/93‑1 (MQ=255)
              agaagaACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTAACATTTCTGTAAGAGATAAAAAAGGCCGGagc                                                                             <  1:6752595/93‑3 (MQ=255)
               gaagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagca                                                                            >  2:5545766/1‑90 (MQ=255)
                aagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagcat                                                                           <  2:7869332/93‑5 (MQ=255)
                aagaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGagcat                                                                           <  1:6989450/93‑5 (MQ=255)
                 agaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGgagcatg                                                                         <  1:721697/93‑1 (MQ=255)
                 agaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGgagcatg                                                                         <  2:4296897/93‑1 (MQ=255)
                 agaaCAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGgagcatg                                                                         <  1:2949230/93‑1 (MQ=255)
                   aacaacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCt                                                                       >  2:8122779/1‑93 (MQ=255)
                   aacaacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCt                                                                       <  1:101489/93‑1 (MQ=255)
                    acaacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTc                                                                      <  2:2957949/93‑1 (MQ=255)
                     caacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTcc                                                                     <  2:8622260/93‑1 (MQ=255)
                      aacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCg                                                                    >  2:2774666/1‑93 (MQ=255)
                      aacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCg                                                                    >  1:1150966/1‑93 (MQ=255)
                      aacCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCg                                                                    >  1:1247228/1‑93 (MQ=255)
                       acCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCgg                                                                   >  2:2426396/1‑93 (MQ=255)
                         cAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGcc                                                                 >  2:8396629/1‑93 (MQ=255)
                         cAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGcc                                                                 >  1:2009177/1‑93 (MQ=255)
                         cAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGcc                                                                 >  1:3968211/1‑93 (MQ=255)
                          aGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCt                                                                <  2:2261616/93‑1 (MQ=255)
                          aGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCt                                                                >  1:405346/1‑93 (MQ=255)
                           gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCtt                                                               >  1:5724016/1‑93 (MQ=255)
                           gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCtt                                                               <  1:5855625/93‑1 (MQ=255)
                            aTAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCttc                                                              <  1:8138770/93‑2 (MQ=255)
                              aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCttcgt                                                            <  1:8418479/93‑4 (MQ=255)
                               aaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCttcgtt                                                           <  1:5346822/93‑5 (MQ=255)
                                 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGtttt                                                        <  1:1756673/93‑1 (MQ=255)
                                 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGtttt                                                        >  1:6044901/1‑93 (MQ=255)
                                 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGtttt                                                        >  1:926751/1‑93 (MQ=255)
                                  gCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtc                                                       <  1:4848770/93‑1 (MQ=255)
                                  gCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCCTCGTTTtc                                                       >  2:93713/1‑93 (MQ=255)
                                   cttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                      <  2:349027/93‑1 (MQ=255)
                                   cttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                      <  1:7085069/93‑1 (MQ=255)
                                   cttcttAGCCAGTATATCACGGAAAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                      <  1:7838987/93‑1 (MQ=255)
                                    ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtcat                                                     >  1:8652012/1‑93 (MQ=255)
                                    ttcttAGCCAGTATTTCACGGGGAGGTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtcat                                                     >  1:6412373/1‑93 (MQ=255)
                                      cttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtcatca                                                   <  2:8467275/93‑1 (MQ=255)
                                       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAc                                                  >  1:2671653/1‑93 (MQ=255)
                                       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAc                                                  >  1:5580181/1‑93 (MQ=255)
                                       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAc                                                  >  1:7376934/1‑93 (MQ=255)
                                       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAc                                                  <  2:6744418/93‑1 (MQ=255)
                                       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGCGCATGCTCCGGCCTTCGTTTTCATCAc                                                  >  1:2179026/1‑93 (MQ=255)
                                         aGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtg                                                >  2:1266326/1‑93 (MQ=255)
                                               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCCTGCTCCCGCCCTTGTTTTTATCACTGTGtttt                                          >  1:3199867/1‑93 (MQ=255)
                                               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTTGTTTTCATCACTGTGtttt                                          >  1:5066043/1‑93 (MQ=255)
                                                aTTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCCTGCTCCGGCCTTCGTTTTCATCACTGTGTTTTg                                         >  1:8506691/1‑93 (MQ=255)
                                                       ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAg                                  >  1:7957162/1‑93 (MQ=255)
                                                       ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAg                                  <  2:6015929/93‑1 (MQ=255)
                                                         ggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgcg                                >  1:2541530/1‑93 (MQ=255)
                                                          gAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgcgc                               <  1:5639798/93‑1 (MQ=255)
                                                          gAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCATTCGTTTTCATCACTGTGTTTTGATTACAgcgc                               <  1:6159980/93‑1 (MQ=255)
                                                            gTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcgg                             >  2:1092018/1‑93 (MQ=255)
                                                            gTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcgg                             >  2:6151717/1‑93 (MQ=255)
                                                             ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggc                            <  2:4630977/93‑1 (MQ=255)
                                                             ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggc                            >  1:7614465/1‑93 (MQ=255)
                                                               aTGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa                          <  1:3864160/93‑1 (MQ=255)
                                                                  ccTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATaa                       <  1:3665463/93‑1 (MQ=255)
                                                                  ccTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGACTTCGTTTTCATCACTGTGGTTTTATTCAAGCgctgcggtta                       >  2:2011021/1‑89 (MQ=255)
                                                                   cttcttTACCATTTCTGTAAGAGATAAAAAGGGCGGGACCATGCTCGGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                      <  2:1728827/93‑1 (MQ=255)
                                                                   cttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGCGCATGCTCCGGCCTTCGGTTTCATCACTGTGTTTTGCTTACAGCGCGGCGATaaa                      >  2:3434162/1‑92 (MQ=255)
                                                                    ttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa                     >  2:5330589/1‑93 (MQ=255)
                                                                      cttTACCATTTGTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGc                   >  2:8688379/1‑93 (MQ=255)
                                                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                  <  2:5414669/93‑1 (MQ=255)
                                                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                  <  2:3684688/93‑1 (MQ=255)
                                                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                  <  2:4399643/93‑1 (MQ=255)
                                                                        ttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct                 >  1:2300640/1‑93 (MQ=255)
                                                                         tACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCCGCCTTCGTTTTTATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctg                >  1:1554164/1‑93 (MQ=255)
                                                                          aCCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc               >  2:5621667/1‑93 (MQ=255)
                                                                           ccATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct              >  1:3621277/1‑93 (MQ=255)
                                                                             aTTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGt            <  1:4227837/93‑1 (MQ=255)
                                                                              tttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt           <  1:3492588/93‑1 (MQ=255)
                                                                                 cTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCaa        >  1:541062/1‑93 (MQ=255)
                                                                                  tGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt       >  2:1365282/1‑93 (MQ=255)
                                                                                  tGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt       >  2:8183347/1‑93 (MQ=255)
                                                                                  tGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt       >  2:3865586/1‑93 (MQ=255)
                                                                                   gTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc      >  2:5071746/1‑93 (MQ=255)
                                                                                    tAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa     >  1:4548146/1‑93 (MQ=255)
                                                                                    tAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa     >  2:7627426/1‑93 (MQ=255)
                                                                                      agagATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt   <  2:7542633/93‑1 (MQ=255)
                                                                                      agagATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTACTGTTCAATCAGt   >  2:4950023/1‑93 (MQ=255)
                                                                                      agagATAAAAAAGGCCGGAGCAGGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt   <  2:7316065/93‑1 (MQ=255)
                                                                                       gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt  <  1:2747593/93‑1 (MQ=255)
                                                                                       gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt  <  2:5311850/93‑1 (MQ=255)
                                                                                       gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGGTTTTATTAATGTGTTTTGATTACAACGCCGCGATAACAACCTTCTGTTCAATCAgct  >  2:3300521/1‑91 (MQ=255)
                                                                                            |                                                                                          
CCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT  >  NC_000913/4478405‑4478587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 203 total aligned reads displayed.
AATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT  >  NC_000913/4478410‑4478598
                                                                                             |                                                                                                
AATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAG                                                                                                  >  SRR4302541.2445434/1‑94 (MQ=60)
 ATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGG                                                                                                 >  SRR4302541.2027985/1‑94 (MQ=60)
 ATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGG                                                                                                 >  SRR4302541.4923602/1‑94 (MQ=60)
 ATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGG                                                                                                 >  SRR4302541.8704180/1‑94 (MQ=60)
 ATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACAATTTCTGTAAGAGATAAAAAAGG                                                                                                 >  SRR4302541.6016335/1‑94 (MQ=60)
  TCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGC                                                                                               <  SRR4302541.7309537/94‑1 (MQ=60)
  TCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGC                                                                                               <  SRR4302541.2730238/94‑1 (MQ=60)
  TCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGAGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGC                                                                                               <  SRR4302541.2730237/94‑1 (MQ=60)
   CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                              >  SRR4302541.1037100/1‑94 (MQ=60)
   CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                              >  SRR4302541.6926927/1‑94 (MQ=60)
   CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                              <  SRR4302541.8880443/94‑1 (MQ=60)
   CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                              <  SRR4302541.2969246/94‑1 (MQ=60)
   CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                              >  SRR4302541.5685937/1‑94 (MQ=60)
   CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                              >  SRR4302541.3400768/1‑94 (MQ=60)
   CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                              >  SRR4302541.5238864/1‑94 (MQ=60)
   CAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCC                                                                                              <  SRR4302541.4196571/94‑1 (MQ=60)
    AATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCG                                                                                             <  SRR4302541.6483426/94‑1 (MQ=60)
    AATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCG                                                                                             <  SRR4302541.247626/94‑1 (MQ=60)
    AATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCG                                                                                             <  SRR4302541.6728544/94‑1 (MQ=60)
     ATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGG                                                                                            >  SRR4302541.401374/1‑94 (MQ=60)
      TAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGA                                                                                           >  SRR4302541.905983/1‑94 (MQ=60)
      TAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGA                                                                                           <  SRR4302541.6904352/94‑1 (MQ=60)
      TAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGA                                                                                           <  SRR4302541.4512053/94‑1 (MQ=60)
       AGAGACGAACAGCCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTGTTTGCCATTTCTGTAAGAGATAAAAAAGGCCGGAG                                                                                          <  SRR4302541.448804/94‑1 (MQ=60)
       AAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAG                                                                                          <  SRR4302541.448576/94‑1 (MQ=60)
         AGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTAACATTTCTGTAAGAGATAAAAAAGGCCGGAGCA                                                                                       <  SRR4302541.6824784/94‑1 (MQ=60)
           AAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATG                                                                                     <  SRR4302541.5781775/94‑1 (MQ=60)
           AAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATG                                                                                     <  SRR4302541.7063869/94‑1 (MQ=60)
            AGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGC                                                                                    >  SRR4302541.8127873/1‑94 (MQ=60)
            AGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGC                                                                                    <  SRR4302541.728521/94‑1 (MQ=60)
            AGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGC                                                                                    >  SRR4302541.1115180/1‑94 (MQ=60)
            AGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGC                                                                                    <  SRR4302541.2978879/94‑1 (MQ=60)
            AGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGC                                                                                    >  SRR4302541.8555053/1‑94 (MQ=60)
             GAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCT                                                                                   <  SRR4302541.41421/94‑1 (MQ=60)
              AACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTC                                                                                 <  SRR4302541.102345/94‑1 (MQ=60)
              AACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTC                                                                                 >  SRR4302541.5270418/1‑94 (MQ=60)
                CAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCG                                                                               >  SRR4302541.1259589/1‑94 (MQ=60)
                CAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCG                                                                               >  SRR4302541.1161954/1‑94 (MQ=60)
                CAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCG                                                                               <  SRR4302541.3600148/94‑1 (MQ=60)
                CAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACAATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCG                                                                               <  SRR4302541.3731963/94‑1 (MQ=60)
                 AACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGG                                                                              <  SRR4302541.2091719/94‑1 (MQ=60)
                 AACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGG                                                                              >  SRR4302541.2940999/1‑94 (MQ=60)
                 AACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGC                                                                              >  SRR4302541.3540160/1‑94 (MQ=60)
                  ACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGC                                                                             >  SRR4302541.1237984/1‑94 (MQ=60)
                   CCAGATAAAGTCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCC                                                                            >  SRR4302541.262888/1‑94 (MQ=60)
                   CCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTTTGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCC                                                                            >  SRR4302541.6503000/1‑94 (MQ=60)
                   CCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCC                                                                            >  SRR4302541.4007606/1‑94 (MQ=60)
                   CCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCC                                                                            >  SRR4302541.2028640/1‑94 (MQ=60)
                   CCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCC                                                                            >  SRR4302541.3666631/1‑94 (MQ=60)
                   CCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCC                                                                            >  SRR4302541.8380103/1‑94 (MQ=60)
                    CAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCT                                                                           >  SRR4302541.409101/1‑94 (MQ=60)
                     AGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTT                                                                          <  SRR4302541.2168057/94‑1 (MQ=60)
                     AGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTT                                                                          >  SRR4302541.5782366/1‑94 (MQ=60)
                     AGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTT                                                                          <  SRR4302541.709217/94‑1 (MQ=60)
                      GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTC                                                                         <  SRR4302541.910288/94‑1 (MQ=60)
                      GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTC                                                                         >  SRR4302541.5293334/1‑94 (MQ=60)
                      GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTC                                                                         <  SRR4302541.5915168/94‑1 (MQ=60)
                      GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTC                                                                         <  SRR4302541.4971833/94‑1 (MQ=60)
                       ATAAAGGTTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTcg                                                                        <  SRR4302541.5065421/94‑3 (MQ=60)
                       ATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTcg                                                                        >  SRR4302541.3814542/1‑92 (MQ=60)
                       ATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTcg                                                                        >  SRR4302541.3459521/1‑92 (MQ=60)
                       ATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTcg                                                                        >  SRR4302541.1906268/1‑92 (MQ=60)
                       ATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTcg                                                                        <  SRR4302541.8227827/94‑3 (MQ=60)
                        TAAAGTCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCgctcgt                                                                       >  SRR4302541.4592793/1‑88 (MQ=60)
                        TAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGT                                                                      >  SRR4302541.2037852/1‑94 (MQ=60)
                         AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                     <  SRR4302541.251773/94‑1 (MQ=60)
                         AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                     <  SRR4302541.8509493/94‑1 (MQ=60)
                         AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                     >  SRR4302541.1286680/1‑94 (MQ=60)
                          AAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTT                                                                    <  SRR4302541.5401785/94‑1 (MQ=60)
                           ATGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                   <  SRR4302541.8021577/94‑1 (MQ=60)
                           AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                   >  SRR4302541.935468/1‑94 (MQ=60)
                           AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                   >  SRR4302541.713383/1‑94 (MQ=60)
                           AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                   >  SRR4302541.8037081/1‑94 (MQ=60)
                           AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                   >  SRR4302541.6106740/1‑94 (MQ=60)
                           AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                   >  SRR4302541.160112/1‑94 (MQ=60)
                            GGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTC                                                                  <  SRR4302541.1773787/94‑1 (MQ=60)
                             GCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCA                                                                 <  SRR4302541.4898208/94‑1 (MQ=60)
                              CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                <  SRR4302541.1356366/94‑1 (MQ=60)
                              CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                >  SRR4302541.8744654/1‑94 (MQ=60)
                              CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                <  SRR4302541.7160431/94‑1 (MQ=60)
                              CTTCTTAGCCAGTATTTCACGGGGAGGTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                >  SRR4302541.6477770/1‑94 (MQ=60)
                              CTTCTTAGCCAGTATATCACGGAAAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                <  SRR4302541.7924621/94‑1 (MQ=60)
                                 CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                             >  SRR4302541.5637301/1‑94 (MQ=60)
                                 CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                             >  SRR4302541.2698197/1‑94 (MQ=60)
                                 CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                             >  SRR4302541.5637302/1‑94 (MQ=60)
                                 CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                             >  SRR4302541.7455787/1‑94 (MQ=60)
                                 CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                             >  SRR4302541.8519127/1‑94 (MQ=60)
                                 CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                             <  SRR4302541.3294839/94‑1 (MQ=60)
                                 CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCAGGCCTTCGTTTTCATCAC                                                             >  SRR4302541.7455505/1‑94 (MQ=60)
                                 CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGCGCATGCTCCGGCCTTCGTTTTCATCAC                                                             >  SRR4302541.2200080/1‑94 (MQ=60)
                                  TTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACT                                                            <  SRR4302541.5191874/94‑1 (MQ=60)
                                    AGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGT                                                          >  SRR4302541.6455778/1‑94 (MQ=60)
                                     GCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTG                                                         >  SRR4302541.3558995/1‑94 (MQ=60)
                                     GCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTG                                                         <  SRR4302541.3689169/94‑1 (MQ=60)
                                      CCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTGTTCATCACTGTGT                                                        >  SRR4302541.7906486/1‑94 (MQ=60)
                                       CAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTT                                                       <  SRR4302541.700308/94‑1 (MQ=60)
                                         GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCCTGCTCCCGCCCTT‑‑GTTTTTATCACTGTGTTTT                                                     >  SRR4302541.3232195/1‑94 (MQ=58)
                                         GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTTGTTTTCATCACTGTGTTTT                                                     >  SRR4302541.5118123/1‑94 (MQ=60)
                                         GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTT                                                     >  SRR4302541.2639309/1‑94 (MQ=60)
                                         GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTT                                                     >  SRR4302541.7726810/1‑94 (MQ=60)
                                          TATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCCTGCTCCGGCCTTCGTTTTCATCACTGTGTTTTG                                                    >  SRR4302541.8598290/1‑94 (MQ=60)
                                            TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                  <  SRR4302541.4880871/94‑1 (MQ=60)
                                            TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                  >  SRR4302541.577236/1‑94 (MQ=60)
                                            TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                  <  SRR4302541.2277764/94‑1 (MQ=60)
                                            TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                  <  SRR4302541.5458694/94‑1 (MQ=60)
                                             TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                 <  SRR4302541.2833707/94‑1 (MQ=60)
                                             TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                 <  SRR4302541.5844764/94‑1 (MQ=60)
                                             TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                 <  SRR4302541.5694021/94‑1 (MQ=60)
                                              TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                >  SRR4302541.1241560/1‑94 (MQ=60)
                                               CACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTAC                                               >  SRR4302541.8396346/1‑94 (MQ=60)
                                               CACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTAC                                               >  SRR4302541.3781767/1‑94 (MQ=60)
                                                 CGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAG                                             >  SRR4302541.8044845/1‑94 (MQ=60)
                                                  GGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGC                                            <  SRR4302541.5805078/94‑1 (MQ=60)
                                                   GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCG                                           >  SRR4302541.2567036/1‑94 (MQ=60)
                                                   GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCG                                           >  SRR4302541.2448490/1‑94 (MQ=60)
                                                   GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTGTTCATCACTGTGTTTTGATTACAGCG                                           >  SRR4302541.3325429/1‑94 (MQ=60)
                                                    GGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGC                                          >  SRR4302541.3904274/1‑94 (MQ=60)
                                                    GGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGC                                          >  SRR4302541.6594009/1‑94 (MQ=60)
                                                     GAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCG                                         <  SRR4302541.6222934/94‑1 (MQ=60)
                                                     GAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCG                                         <  SRR4302541.5697453/94‑1 (MQ=60)
                                                     GAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCATTCGTTTTCATCACTGTGTTTTGATTACAGCGCG                                         <  SRR4302541.6222935/94‑1 (MQ=60)
                                                      AGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGG                                        >  SRR4302541.7770000/1‑94 (MQ=60)
                                                      AGTTATGCCTTCTTTACAATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGG                                        <  SRR4302541.4056130/94‑1 (MQ=60)
                                                       GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGC                                       >  SRR4302541.6551113/1‑94 (MQ=60)
                                                       GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGC                                       >  SRR4302541.7695813/1‑94 (MQ=60)
                                                       GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGC                                       >  SRR4302541.5570771/1‑94 (MQ=60)
                                                         TATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGA                                     >  SRR4302541.7220216/1‑94 (MQ=60)
                                                          ATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAT                                    >  SRR4302541.2277449/1‑94 (MQ=60)
                                                          ATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAT                                    <  SRR4302541.3903030/94‑1 (MQ=60)
                                                           TGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATA                                   >  SRR4302541.8900796/1‑94 (MQ=60)
                                                            GCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAA                                  <  SRR4302541.7229738/94‑1 (MQ=60)
                                                             CCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAC                                 >  SRR4302541.3763983/1‑94 (MQ=60)
                                                             CCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAC                                 <  SRR4302541.3702652/94‑1 (MQ=60)
                                                              CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCTGTTTCATCACTGTGTTTTCATTACATCGCGGCGATAACA                                >  SRR4302541.304202/1‑94 (MQ=60)
                                                              CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCCCTGTGTTTTGATTtacgcgcggcgctaaac                                >  SRR4302541.1666047/1‑77 (MQ=60)
                                                              CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACA                                >  SRR4302541.5977177/1‑94 (MQ=60)
                                                                TCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGC                              <  SRR4302541.8792911/94‑1 (MQ=60)
                                                                TCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGC                              >  SRR4302541.590486/1‑94 (MQ=60)
                                                                  TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                            >  SRR4302541.2322955/1‑94 (MQ=60)
                                                                  TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                            >  SRR4302541.5403626/1‑94 (MQ=60)
                                                                  TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                            >  SRR4302541.3998450/1‑94 (MQ=60)
                                                                  TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                            <  SRR4302541.7214798/94‑1 (MQ=60)
                                                                  TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                            <  SRR4302541.4896867/94‑1 (MQ=60)
                                                                  TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                            <  SRR4302541.5153022/94‑1 (MQ=60)
                                                                   TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                           <  SRR4302541.5764331/94‑1 (MQ=60)
                                                                   TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                           <  SRR4302541.3786355/94‑1 (MQ=60)
                                                                   TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCCGCCTTCGTTTTTATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                           >  SRR4302541.1569739/1‑94 (MQ=60)
                                                                    TACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGC                          >  SRR4302541.348775/1‑94 (MQ=60)
                                                                     ACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                         >  SRR4302541.3657988/1‑94 (MQ=60)
                                                                     ACCATTTCTGTAAGAAATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                         <  SRR4302541.1575893/94‑1 (MQ=60)
                                                                      CCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTTCTGCCTTCGTTTTCATCACTGTGTTTTGATTATAGCGCGGCGATGACAGCCTGCGG                        >  SRR4302541.352292/1‑94 (MQ=56)
                                                                      CCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTG                        >  SRR4302541.3300115/1‑94 (MQ=60)
                                                                       CATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGT                       >  SRR4302541.8578918/1‑94 (MQ=60)
                                                                       CATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGT                       <  SRR4302541.6436009/94‑1 (MQ=60)
                                                                        ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                      >  SRR4302541.8135702/1‑94 (MQ=60)
                                                                        ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                      <  SRR4302541.4269942/94‑1 (MQ=60)
                                                                        ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                      <  SRR4302541.7341410/94‑1 (MQ=60)
                                                                        ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                      >  SRR4302541.7420766/1‑94 (MQ=60)
                                                                         TTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTC                     <  SRR4302541.7551362/94‑1 (MQ=60)
                                                                         TTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTC                     <  SRR4302541.3527588/94‑1 (MQ=60)
                                                                           TCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAA                   >  SRR4302541.546153/1‑94 (MQ=60)
                                                                           TCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAA                   <  SRR4302541.1258008/94‑1 (MQ=60)
                                                                           TCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGAATTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAA                   <  SRR4302541.5937962/94‑1 (MQ=60)
                                                                            CTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAT                  <  SRR4302541.555491/94‑1 (MQ=60)
                                                                             TGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGTCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCCATC                 >  SRR4302541.2600561/1‑94 (MQ=60)
                                                                              GTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCA                >  SRR4302541.6184362/1‑94 (MQ=60)
                                                                              GTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCA                >  SRR4302541.4594155/1‑94 (MQ=60)
                                                                               TAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAG               >  SRR4302541.4048402/1‑94 (MQ=60)
                                                                                AAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT              <  SRR4302541.863751/94‑1 (MQ=60)
                                                                                 AGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT             >  SRR4302541.8079886/1‑94 (MQ=60)
                                                                                  GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT            >  SRR4302541.8244465/1‑94 (MQ=60)
                                                                                  GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT            >  SRR4302541.8335656/1‑94 (MQ=60)
                                                                                  GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT            <  SRR4302541.3053526/94‑1 (MQ=60)
                                                                                  GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT            >  SRR4302541.6535182/1‑94 (MQ=60)
                                                                                  GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT            >  SRR4302541.5567850/1‑94 (MQ=60)
                                                                                  GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT            >  SRR4302541.3031407/1‑94 (MQ=60)
                                                                                  GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT            <  SRR4302541.2775186/94‑1 (MQ=60)
                                                                                   AGATAAAAAAGGCCGGAGCCTGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGAGCGGCGATAACAGCCTGCTGTTCAATCTGTTTC           >  SRR4302541.6652671/1‑94 (MQ=60)
                                                                                   AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           >  SRR4302541.4161176/1‑94 (MQ=60)
                                                                                   AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           <  SRR4302541.8836662/94‑1 (MQ=60)
                                                                                   AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           >  SRR4302541.5369492/1‑94 (MQ=60)
                                                                                   AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           >  SRR4302541.2575868/1‑94 (MQ=60)
                                                                                   AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           >  SRR4302541.2575867/1‑94 (MQ=60)
                                                                                   AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           >  SRR4302541.4161177/1‑94 (MQ=60)
                                                                                   AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC           >  SRR4302541.7760863/1‑94 (MQ=60)
                                                                                    GATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCG          <  SRR4302541.7470465/94‑1 (MQ=60)
                                                                                        AAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT       >  SRR4302541.8221716/1‑94 (MQ=60)
                                                                                        AAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT       >  SRR4302541.2496277/1‑94 (MQ=60)
                                                                                        AAAAAAGGCCGGAGCATGCCCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT       <  SRR4302541.1569930/94‑1 (MQ=60)
                                                                                         AACAAGGCCGGAGCATGCTCCGGCCTTCGTTTTAATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTT      <  SRR4302541.4753934/94‑1 (MQ=60)
                                                                                         AAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTT      <  SRR4302541.5286399/94‑1 (MQ=60)
                                                                                         AAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTT      >  SRR4302541.1905508/1‑94 (MQ=60)
                                                                                           AAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG    >  SRR4302541.8833971/1‑94 (MQ=60)
                                                                                           AAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG    >  SRR4302541.3595710/1‑94 (MQ=60)
                                                                                            AAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGT   >  SRR4302541.5915804/1‑94 (MQ=60)
                                                                                            AAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGC   >  SRR4302541.5922685/1‑94 (MQ=60)
                                                                                            AAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGC   >  SRR4302541.4781910/1‑94 (MQ=60)
                                                                                             AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT  <  SRR4302541.7690673/94‑1 (MQ=60)
                                                                                             AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT  <  SRR4302541.36212/94‑1 (MQ=60)
                                                                                             AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACACACTGCTGTTCAATCAGTTTCGCTTTCGCT  >  SRR4302541.3171718/1‑94 (MQ=60)
                                                                                             |                                                                                                
AATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT  >  NC_000913/4478410‑4478598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: