Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGG  >  NC_000913/3941641‑3941800
                                                                                             |                                                                  
CGCGATACAGGGTGACAGCCCCGTACGCAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGCGGTATCCTGTCTGAATATGGGG                                                                    <  SRR4302541.1489847/94‑1 (MQ=21)
CGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGGTGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGG                                                                    <  SRR4302541.3043175/94‑1 (MQ=22)
CGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGG                                                                    <  SRR4302541.3906073/94‑1 (MQ=23)
CGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGG                                                                    >  SRR4302541.2232827/1‑94 (MQ=23)
 GCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGG                                                                   >  SRR4302541.8654782/1‑94 (MQ=21)
 GCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGG                                                                   <  SRR4302541.7342591/94‑1 (MQ=21)
 GCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGG                                                                   <  SRR4302541.3930297/94‑1 (MQ=21)
 GCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGG                                                                   <  SRR4302541.2126191/94‑1 (MQ=21)
 GCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGG                                                                   <  SRR4302541.1983736/94‑1 (MQ=21)
 CCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGG                                                                   <  SRR4302541.1036304/94‑1 (MQ=20)
  CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG                                                                  >  SRR4302541.4246967/1‑94 (MQ=10)
  CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG                                                                  <  SRR4302541.6887256/94‑1 (MQ=10)
  CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG                                                                  <  SRR4302541.468649/94‑1 (MQ=10)
  CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG                                                                  >  SRR4302541.3627610/1‑94 (MQ=10)
  CGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGG                                                                  <  SRR4302541.2398235/94‑1 (MQ=10)
    ATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGAC                                                               >  SRR4302541.1298861/1‑94 (MQ=4)
    ATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGAC                                                               <  SRR4302541.1570507/94‑1 (MQ=4)
     TACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACC                                                              >  SRR4302541.2142001/1‑94 (MQ=2)
     TACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACC                                                              >  SRR4302541.8109090/1‑94 (MQ=2)
      ACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCA                                                             >  SRR4302541.6054760/1‑94 (MQ=0)
      ACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCA                                                             >  SRR4302541.4050839/1‑94 (MQ=0)
      ACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCA                                                             >  SRR4302541.257113/1‑94 (MQ=0)
       CAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCAT                                                            >  SRR4302541.4046753/1‑94 (MQ=0)
        AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGCCCATC                                                           >  SRR4302541.5928948/1‑94 (MQ=6)
        AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATC                                                           >  SRR4302541.6825282/1‑94 (MQ=0)
        AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATC                                                           >  SRR4302541.5146716/1‑94 (MQ=0)
        AGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATC                                                           >  SRR4302541.8321652/1‑94 (MQ=0)
         GGGTGACAGCCCCGTACACAAAAATGCACGTATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATA‑GGGGGGGACCATCC                                                          >  SRR4302541.1164241/1‑94 (MQ=0)
          GGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGTCCATCCT                                                         >  SRR4302541.6748342/1‑94 (MQ=1)
          GGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCT                                                         <  SRR4302541.5063214/94‑1 (MQ=0)
          GGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCT                                                         >  SRR4302541.495145/1‑94 (MQ=0)
          GGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCT                                                         <  SRR4302541.3311491/94‑1 (MQ=0)
           GTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTC                                                        >  SRR4302541.2532359/1‑94 (MQ=0)
           GTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTC                                                        <  SRR4302541.5646989/94‑1 (MQ=0)
            TGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCC                                                       >  SRR4302541.6851961/1‑94 (MQ=0)
              ACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAA                                                     <  SRR4302541.1396448/94‑1 (MQ=0)
               CAGCCCCTTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAG                                                    <  SRR4302541.691087/94‑1 (MQ=0)
               CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAG                                                    <  SRR4302541.5387557/94‑1 (MQ=0)
               CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAG                                                    >  SRR4302541.605811/1‑94 (MQ=0)
               CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAG                                                    <  SRR4302541.6269809/94‑1 (MQ=0)
               CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAG                                                    >  SRR4302541.4130216/1‑94 (MQ=0)
               CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAG                                                    >  SRR4302541.1813646/1‑94 (MQ=0)
               CAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAG                                                    <  SRR4302541.4037754/94‑1 (MQ=0)
                AGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACTTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGG                                                   <  SRR4302541.925731/94‑1 (MQ=0)
                AGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGAGCATCCTCCAAGG                                                   >  SRR4302541.7861265/1‑94 (MQ=0)
                AGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGG                                                   >  SRR4302541.5376961/1‑94 (MQ=0)
                AGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGG                                                   <  SRR4302541.754141/94‑1 (MQ=0)
                 GCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTATGGCGGGACACGTGGAATCCTGTCTGAATATGGG‑GGGGCCATCCTCCAAGGT                                                  >  SRR4302541.6088869/1‑94 (MQ=0)
                  CCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCT                                                 <  SRR4302541.3295137/94‑1 (MQ=0)
                  CCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCT                                                 >  SRR4302541.887998/1‑94 (MQ=0)
                  CCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCT                                                 >  SRR4302541.1882273/1‑94 (MQ=0)
                  CCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCT                                                 <  SRR4302541.4644118/94‑1 (MQ=0)
                  CCCCGTACAAAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCT                                                 <  SRR4302541.6862124/94‑1 (MQ=0)
                   CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACTTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTA                                                >  SRR4302541.3322391/1‑94 (MQ=0)
                   CCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTA                                                <  SRR4302541.5878383/94‑1 (MQ=0)
                    CCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAA                                               >  SRR4302541.914793/1‑94 (MQ=0)
                    CCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAA                                               <  SRR4302541.7580792/94‑1 (MQ=0)
                    CCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTAGCCTGGCTGAGTATGGG‑GGGACCATCCTCCAAGGCTAA                                               >  SRR4302541.6962351/1‑94 (MQ=0)
                     CGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAA                                              >  SRR4302541.1023866/1‑94 (MQ=0)
                     CGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAA                                              <  SRR4302541.5618698/94‑1 (MQ=0)
                       TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATA                                            <  SRR4302541.2759036/94‑1 (MQ=0)
                       TACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATA                                            <  SRR4302541.3862310/94‑1 (MQ=0)
                        ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGCCACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTCAATAC                                           >  SRR4302541.246781/1‑94 (MQ=0)
                        ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATAC                                           <  SRR4302541.931059/94‑1 (MQ=0)
                        ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATAC                                           <  SRR4302541.1117508/94‑1 (MQ=0)
                        ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATAC                                           <  SRR4302541.3293495/94‑1 (MQ=0)
                        ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATAC                                           >  SRR4302541.35117/1‑94 (MQ=0)
                        ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATAC                                           >  SRR4302541.246782/1‑94 (MQ=0)
                        ACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATAC                                           <  SRR4302541.4477761/94‑1 (MQ=0)
                          ACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTC                                         >  SRR4302541.2321834/1‑94 (MQ=0)
                           CAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCC                                        <  SRR4302541.6065042/94‑1 (MQ=0)
                            AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCT                                       <  SRR4302541.1625608/94‑1 (MQ=0)
                            AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCT                                       >  SRR4302541.1937058/1‑94 (MQ=0)
                            AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCT                                       >  SRR4302541.6447227/1‑94 (MQ=0)
                            AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCT                                       >  SRR4302541.2343323/1‑94 (MQ=0)
                            AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCT                                       >  SRR4302541.632165/1‑94 (MQ=0)
                            AAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCT                                       <  SRR4302541.3771418/94‑1 (MQ=0)
                             AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGCCCATCCTCCAAGGCTAAATACTCCTG                                      >  SRR4302541.2741374/1‑94 (MQ=0)
                             AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTG                                      <  SRR4302541.2195682/94‑1 (MQ=0)
                             AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTG                                      >  SRR4302541.1281275/1‑94 (MQ=0)
                             AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTG                                      >  SRR4302541.7175722/1‑94 (MQ=0)
                             AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTG                                      <  SRR4302541.2822300/94‑1 (MQ=0)
                             AAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATAATCCTG                                      >  SRR4302541.498014/1‑94 (MQ=0)
                              AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTG                                      >  SRR4302541.7790867/1‑94 (MQ=33)
                              AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGC                                     >  SRR4302541.2397540/1‑94 (MQ=0)
                              AAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGA                                     >  SRR4302541.4541871/1‑94 (MQ=0)
                               AATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGAC                                    >  SRR4302541.5226284/1‑94 (MQ=0)
                               AATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGAC                                    >  SRR4302541.5023584/1‑94 (MQ=0)
                               AATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGAC                                    >  SRR4302541.5031376/1‑94 (MQ=0)
                               AATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGAC                                    <  SRR4302541.2827626/94‑1 (MQ=0)
                                ATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACT                                   >  SRR4302541.7880632/1‑94 (MQ=0)
                                ATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACT                                   >  SRR4302541.3545433/1‑94 (MQ=0)
                                ATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACT                                   >  SRR4302541.4293664/1‑94 (MQ=0)
                                 TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACTG                                  <  SRR4302541.170890/94‑1 (MQ=0)
                                 TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACTG                                  <  SRR4302541.6455439/94‑1 (MQ=0)
                                 TGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACTG                                  >  SRR4302541.4544506/1‑94 (MQ=0)
                                  GCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACTGA                                 <  SRR4302541.2447661/94‑1 (MQ=0)
                                  GCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACTGA                                 <  SRR4302541.4183390/94‑1 (MQ=0)
                                   CACATATTGTGATCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACTGAC                                >  SRR4302541.3754750/1‑94 (MQ=0)
                                   CACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG‑GGGACCATCCTCCAAGGCTAAATACTCCTGACTGAC                                <  SRR4302541.6014067/94‑1 (MQ=0)
                                                    ATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATCCTCCCGACTGACCGATAGTGAACCAGTA                <  SRR4302541.4513474/94‑1 (MQ=0)
                                                                  ACACGTGGTATCCTGTCTGAATATGGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGG  <  SRR4302541.2077837/94‑1 (MQ=0)
                                                                                             |                                                                  
CGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGAGGGACCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCGTGAGGGAAAGG  >  NC_000913/3941641‑3941800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑