Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGA > NC_000913/4441970‑4442155
|
TGATCT‑GCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGG < SRR4302541.1120840/94‑1 (MQ=60)
GATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGG < SRR4302541.6640396/94‑1 (MQ=60)
GATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGG > SRR4302541.5164132/1‑94 (MQ=60)
ATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGA > SRR4302541.7415294/1‑94 (MQ=60)
CTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATC < SRR4302541.6520272/94‑1 (MQ=60)
TGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCT > SRR4302541.6925967/1‑94 (MQ=60)
GGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTC < SRR4302541.4457075/94‑1 (MQ=60)
GCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCT < SRR4302541.8784905/94‑1 (MQ=60)
GCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCC < SRR4302541.2313446/94‑1 (MQ=60)
CTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCA < SRR4302541.3961550/94‑1 (MQ=60)
CTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCA > SRR4302541.5362580/1‑94 (MQ=60)
TGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCAC > SRR4302541.3602634/1‑94 (MQ=60)
GAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACG < SRR4302541.5502160/94‑1 (MQ=60)
GAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACG < SRR4302541.7510625/94‑1 (MQ=60)
AAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGC > SRR4302541.1699201/1‑94 (MQ=60)
AAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCC > SRR4302541.5634560/1‑94 (MQ=60)
ACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTA > SRR4302541.3516190/1‑94 (MQ=60)
ACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTA > SRR4302541.3516189/1‑94 (MQ=60)
CATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTAT < SRR4302541.802510/94‑1 (MQ=60)
CATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTAT > SRR4302541.6004910/1‑94 (MQ=60)
CATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTAT < SRR4302541.7413523/94‑1 (MQ=60)
CATTCAGATCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTAT < SRR4302541.3816623/94‑1 (MQ=60)
TTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCC < SRR4302541.3119162/94‑1 (MQ=60)
TTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCC < SRR4302541.5449021/94‑1 (MQ=60)
TTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCC < SRR4302541.5449022/94‑1 (MQ=60)
TCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCC > SRR4302541.359569/1‑94 (MQ=60)
CAGGTCAACATCGACATGAAAAAAAGGGCTCCTTGTGAAGAGGTTGAAGAAGAGGAAGATAGCGGTCCCCCGGATCTCTCCACGCCGTATCCCA < SRR4302541.6388024/94‑1 (MQ=60)
CAGGTCAACATCGACAGAAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCA < SRR4302541.1638204/94‑1 (MQ=60)
AGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCAT > SRR4302541.339657/1‑94 (MQ=60)
AGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCAT < SRR4302541.5291820/94‑1 (MQ=60)
GGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCTATC > SRR4302541.6159986/1‑94 (MQ=60)
GGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATC > SRR4302541.6693999/1‑94 (MQ=60)
GGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATC > SRR4302541.6694000/1‑94 (MQ=60)
GTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCA > SRR4302541.3071148/1‑94 (MQ=60)
TCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCAC > SRR4302541.155060/1‑94 (MQ=60)
CAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACC > SRR4302541.1416262/1‑94 (MQ=60)
AACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGAACTCTCCACGCCGTATCCCATCACCC > SRR4302541.3615044/1‑94 (MQ=60)
AACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCC > SRR4302541.5125439/1‑94 (MQ=60)
AACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCC > SRR4302541.6854540/1‑94 (MQ=60)
AACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGG‑TCTCTCCACGCCGTATCCCATCACCCT > SRR4302541.7844910/1‑94 (MQ=60)
ACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCT < SRR4302541.5681705/94‑1 (MQ=60)
ACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCACATCACCCT > SRR4302541.8543779/1‑94 (MQ=60)
CATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTG > SRR4302541.8771069/1‑94 (MQ=60)
CAGCGACAGTAAAAAAAAGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTG < SRR4302541.834005/94‑1 (MQ=60)
ATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTGCGCTGGATCTCTCCACGCCGTATCCCATCACCCCGA > SRR4302541.5358742/1‑94 (MQ=60)
ATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGA > SRR4302541.113984/1‑94 (MQ=60)
ATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGA > SRR4302541.7565736/1‑94 (MQ=60)
ATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGA < SRR4302541.6846162/94‑1 (MQ=60)
ATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGA > SRR4302541.1649034/1‑94 (MQ=60)
TCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGAC < SRR4302541.7687818/94‑1 (MQ=60)
CGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACA > SRR4302541.4405982/1‑94 (MQ=60)
CGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACA < SRR4302541.4876090/94‑1 (MQ=60)
CGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACA > SRR4302541.8807349/1‑94 (MQ=60)
GACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACAC < SRR4302541.444423/94‑1 (MQ=60)
GACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACAC < SRR4302541.2818527/94‑1 (MQ=60)
GACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACAC < SRR4302541.7740396/94‑1 (MQ=60)
ACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACG > SRR4302541.858165/1‑94 (MQ=60)
ACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACG < SRR4302541.5687604/94‑1 (MQ=60)
CAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGG < SRR4302541.1542270/94‑1 (MQ=60)
AGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACATGGG > SRR4302541.2434238/1‑94 (MQ=60)
AGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGG < SRR4302541.3088930/94‑1 (MQ=60)
GTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGG > SRR4302541.1930117/1‑94 (MQ=60)
TAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTG < SRR4302541.6044025/94‑1 (MQ=60)
AAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGG < SRR4302541.939557/94‑1 (MQ=60)
AAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGG < SRR4302541.3134037/94‑1 (MQ=60)
AAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGCGGC > SRR4302541.3641663/1‑94 (MQ=60)
AAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGC < SRR4302541.6468350/94‑1 (MQ=60)
AAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCA > SRR4302541.4409172/1‑94 (MQ=60)
AAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCA > SRR4302541.1267808/1‑94 (MQ=60)
AAAATGCCTCCTTCTGAACAGGTTTAAGAAAAGGAAAATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCAC < SRR4302541.2971945/94‑1 (MQ=60)
AAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCAC > SRR4302541.2504044/1‑94 (MQ=60)
AAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCAC < SRR4302541.2971946/94‑1 (MQ=60)
AAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACT > SRR4302541.6262672/1‑94 (MQ=60)
AATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTG < SRR4302541.1210647/94‑1 (MQ=60)
AATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTG < SRR4302541.2330546/94‑1 (MQ=60)
TGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGA > SRR4302541.6215868/1‑94 (MQ=60)
GCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGAC < SRR4302541.3818934/94‑1 (MQ=60)
GCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGAC < SRR4302541.3774439/94‑1 (MQ=60)
CTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAA > SRR4302541.8870483/1‑94 (MQ=60)
CTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAA > SRR4302541.45638/1‑94 (MQ=60)
CCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAAC < SRR4302541.6514728/94‑1 (MQ=60)
CCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACG > SRR4302541.8656550/1‑94 (MQ=60)
CTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGT > SRR4302541.5864331/1‑94 (MQ=60)
CTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGT > SRR4302541.3375095/1‑94 (MQ=60)
CTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGT > SRR4302541.617998/1‑94 (MQ=60)
CTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGT > SRR4302541.3168459/1‑94 (MQ=60)
TTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTC > SRR4302541.5570872/1‑94 (MQ=60)
TTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTC > SRR4302541.981036/1‑94 (MQ=60)
TCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCA < SRR4302541.48752/94‑1 (MQ=60)
CTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGGGCCACTGGACAACGCCAA > SRR4302541.2942834/1‑94 (MQ=60)
GAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACA > SRR4302541.6327653/1‑94 (MQ=60)
GAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACA > SRR4302541.8360164/1‑94 (MQ=60)
GAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACA > SRR4302541.8381561/1‑94 (MQ=60)
AACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACAT > SRR4302541.3234357/1‑94 (MQ=60)
AACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACAT < SRR4302541.5272142/94‑1 (MQ=60)
AACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACAT > SRR4302541.6387711/1‑94 (MQ=60)
ACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATT > SRR4302541.6002115/1‑94 (MQ=60)
CAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTA > SRR4302541.7404826/1‑94 (MQ=60)
CAGGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTA > SRR4302541.2617911/1‑94 (MQ=60)
AGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAA < SRR4302541.4449441/94‑1 (MQ=60)
GGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAG < SRR4302541.3316330/94‑1 (MQ=60)
GGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAG > SRR4302541.131648/1‑94 (MQ=60)
GGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAG < SRR4302541.7634884/94‑1 (MQ=60)
GGTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAG > SRR4302541.6279730/1‑94 (MQ=60)
GTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGA > SRR4302541.5767389/1‑94 (MQ=60)
GTTGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGA < SRR4302541.7902919/94‑1 (MQ=60)
TTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGAT < SRR4302541.896142/94‑1 (MQ=60)
TGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCCCGACGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATA > SRR4302541.270421/1‑94 (MQ=60)
TGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATT < SRR4302541.774272/94‑1 (MQ=60)
TGAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATT > SRR4302541.3487666/1‑94 (MQ=60)
GAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTG < SRR4302541.8149902/94‑1 (MQ=60)
GAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTG < SRR4302541.4081553/94‑1 (MQ=60)
GAAGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTG < SRR4302541.5641370/94‑1 (MQ=60)
AGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGAT < SRR4302541.1382967/94‑1 (MQ=60)
AGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGAT < SRR4302541.1688967/94‑1 (MQ=60)
AGAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGAT < SRR4302541.8721842/94‑1 (MQ=60)
GAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATG > SRR4302541.6776331/1‑94 (MQ=60)
AAAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATG < SRR4302541.8155340/94‑1 (MQ=60)
AAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGA < SRR4302541.3507129/94‑1 (MQ=60)
AAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGA < SRR4302541.8890674/94‑1 (MQ=60)
AAGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGA > SRR4302541.3128898/1‑94 (MQ=60)
AGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGAC < SRR4302541.5982066/94‑1 (MQ=60)
AGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGAC < SRR4302541.334923/94‑1 (MQ=60)
AGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGAC < SRR4302541.2464091/94‑1 (MQ=60)
AGAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGAC > SRR4302541.1661914/1‑94 (MQ=60)
GAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACA > SRR4302541.6239312/1‑94 (MQ=60)
GAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACA < SRR4302541.5132272/94‑1 (MQ=60)
GAGGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATACCATCACCCTGACCCGGGGGGCACTGGACAACGTCAACATTAAGATTGATGACA > SRR4302541.2342355/1‑94 (MQ=60)
AGGAATATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACAC < SRR4302541.3780400/94‑1 (MQ=60)
GGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACC < SRR4302541.4859151/94‑1 (MQ=60)
GGAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACC > SRR4302541.6724914/1‑94 (MQ=60)
GAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATTACCCTGACACGGGTGGAACTGGACAACGTCAACATTATGATTGATGACACCA > SRR4302541.8110631/1‑94 (MQ=60)
GAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCA < SRR4302541.520592/94‑1 (MQ=60)
GAAGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCA > SRR4302541.3372438/1‑94 (MQ=60)
AGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACG < SRR4302541.4110138/94‑1 (MQ=60)
AGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACG < SRR4302541.6083512/94‑1 (MQ=60)
AGATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACG < SRR4302541.8785094/94‑1 (MQ=60)
GATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGG > SRR4302541.3551969/1‑94 (MQ=60)
ATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGT > SRR4302541.5614461/1‑94 (MQ=60)
ATAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGT > SRR4302541.2825422/1‑94 (MQ=60)
TAGCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCGCCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTA < SRR4302541.4714867/94‑1 (MQ=60)
GCGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATC < SRR4302541.5057498/94‑1 (MQ=60)
CGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCG < SRR4302541.3977364/94‑1 (MQ=60)
CGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCG < SRR4302541.4311216/94‑1 (MQ=60)
CGGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCG > SRR4302541.3044979/1‑94 (MQ=60)
GGTCCGCTGGATCTCTCCACGCCGTATCCCATCGCCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGG > SRR4302541.4785770/1‑94 (MQ=60)
GGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGG > SRR4302541.3892522/1‑94 (MQ=60)
GGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGG > SRR4302541.4785771/1‑94 (MQ=60)
GGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGG > SRR4302541.2313226/1‑94 (MQ=60)
GGTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGG > SRR4302541.4385709/1‑94 (MQ=60)
GTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGT < SRR4302541.5975833/94‑1 (MQ=60)
GTCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGT < SRR4302541.2832330/94‑1 (MQ=60)
TCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTG < SRR4302541.765655/94‑1 (MQ=60)
TCCGCCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTG > SRR4302541.5791533/1‑94 (MQ=60)
CTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGG < SRR4302541.297396/94‑1 (MQ=60)
CTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGG > SRR4302541.6541/1‑94 (MQ=60)
CCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGG < SRR4302541.3868448/94‑1 (MQ=60)
CCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGG > SRR4302541.1971614/1‑94 (MQ=60)
CCGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGG > SRR4302541.3967401/1‑94 (MQ=60)
CGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGA > SRR4302541.7495939/1‑94 (MQ=60)
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TGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGA > NC_000913/4441970‑4442155
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
