Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAA‑TAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCAT > NC_000913/4474756‑4474914
|
AAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTT > SRR4302541.7124174/1‑94 (MQ=60)
AAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGAGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTT < SRR4302541.7494344/94‑1 (MQ=60)
ATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgt > SRR4302541.5998430/1‑92 (MQ=60)
ATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgt > SRR4302541.467632/1‑92 (MQ=60)
TCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgta < SRR4302541.6276934/94‑4 (MQ=60)
TCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgta < SRR4302541.1890336/94‑4 (MQ=60)
CCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtat < SRR4302541.1091985/94‑5 (MQ=60)
CCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtat > SRR4302541.444615/1‑90 (MQ=60)
CACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatt > SRR4302541.3127924/1‑89 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtattt < SRR4302541.6681261/94‑7 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtattt < SRR4302541.7697232/94‑7 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtattt > SRR4302541.129057/1‑88 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtattc > SRR4302541.6745928/1‑88 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccg > SRR4302541.1248733/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc > SRR4302541.7587495/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc > SRR4302541.5388520/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc > SRR4302541.2155172/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttccc < SRR4302541.6007750/94‑10 (MQ=60)
GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccg < SRR4302541.1863406/94‑11 (MQ=60)
GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccg > SRR4302541.8454449/1‑84 (MQ=60)
AAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccgg > SRR4302541.3083240/1‑83 (MQ=60)
AAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggc > SRR4302541.1326658/1‑82 (MQ=60)
AATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggca > SRR4302541.3120936/1‑81 (MQ=60)
AATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggca < SRR4302541.1052863/94‑14 (MQ=60)
AATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggca > SRR4302541.1506863/1‑81 (MQ=60)
ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcat > SRR4302541.6439931/1‑80 (MQ=60)
ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcat > SRR4302541.6466332/1‑80 (MQ=60)
TACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctt > SRR4302541.5974971/1‑77 (MQ=60)
ACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttt < SRR4302541.8158996/94‑19 (MQ=60)
CGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta > SRR4302541.7779733/1‑75 (MQ=60)
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata > SRR4302541.5989706/1‑73 (MQ=60)
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata < SRR4302541.1489147/94‑22 (MQ=60)
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata > SRR4302541.5989708/1‑73 (MQ=60)
ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag > SRR4302541.3005435/1‑72 (MQ=60)
ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag < SRR4302541.6214212/94‑23 (MQ=60)
ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag < SRR4302541.416348/94‑23 (MQ=60)
TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc > SRR4302541.2226107/1‑71 (MQ=60)
GCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgt < SRR4302541.7778811/94‑26 (MQ=60)
CAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat > SRR4302541.8544065/1‑68 (MQ=60)
CAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat < SRR4302541.7115428/94‑27 (MQ=60)
AATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata > SRR4302541.3499300/1‑67 (MQ=60)
AATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata < SRR4302541.4861505/94‑28 (MQ=60)
TAGAACACTTTGGGTTGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttctcggcatctttatagcgataga > SRR4302541.2376869/1‑65 (MQ=60)
TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > SRR4302541.1454317/1‑65 (MQ=60)
TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > SRR4302541.452787/1‑65 (MQ=60)
TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > SRR4302541.6235903/1‑65 (MQ=60)
AGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca < SRR4302541.8788451/94‑31 (MQ=60)
AGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca < SRR4302541.4207728/94‑31 (MQ=60)
GAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaa < SRR4302541.217410/94‑32 (MQ=60)
GAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaa < SRR4302541.4059891/94‑32 (MQ=60)
ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt > SRR4302541.819701/1‑61 (MQ=60)
ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt < SRR4302541.4949582/94‑34 (MQ=60)
CACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatta < SRR4302541.2412289/94‑35 (MQ=60)
CACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatta < SRR4302541.6047903/94‑35 (MQ=60)
ACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattat < SRR4302541.2818/94‑36 (MQ=60)
CTTTGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatt > SRR4302541.6197937/1‑58 (MQ=60)
TGGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac < SRR4302541.2862243/94‑40 (MQ=60)
GGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact < SRR4302541.3924157/94‑41 (MQ=60)
GGGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact < SRR4302541.2263362/94‑41 (MQ=60)
GGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg > SRR4302541.600471/1‑53 (MQ=60)
GGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg < SRR4302541.6275586/94‑42 (MQ=60)
GGTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg > SRR4302541.8480547/1‑53 (MQ=60)
GTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > SRR4302541.1586488/1‑52 (MQ=60)
GTGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga < SRR4302541.7779216/94‑43 (MQ=60)
TGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag < SRR4302541.6965416/94‑44 (MQ=60)
TGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag > SRR4302541.360512/1‑51 (MQ=60)
TGGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag > SRR4302541.5953071/1‑51 (MQ=60)
GGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagc < SRR4302541.6446965/94‑45 (MQ=60)
GGAAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagc > SRR4302541.2952423/1‑50 (MQ=60)
GAAGAATAGTCCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcg > SRR4302541.6305033/1‑49 (MQ=60)
AAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgt < SRR4302541.3531960/94‑47 (MQ=60)
AAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgt > SRR4302541.506760/1‑48 (MQ=60)
AAGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgt < SRR4302541.6319741/94‑47 (MQ=60)
AGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtc < SRR4302541.3327962/94‑48 (MQ=60)
AGAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagcgtc < SRR4302541.7268406/94‑48 (MQ=60)
GAATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCG < SRR4302541.6376892/94‑1 (MQ=30)
AATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGC > SRR4302541.1654877/1‑94 (MQ=28)
ATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCG < SRR4302541.3516925/94‑1 (MQ=26)
ATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCG < SRR4302541.2239115/94‑1 (MQ=26)
ATAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCG > SRR4302541.1064698/1‑94 (MQ=26)
TAGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGA > SRR4302541.170613/1‑94 (MQ=25)
AGACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATACCA‑ATTATTTACTGAGCGTCGCGAC > SRR4302541.952878/1‑94 (MQ=23)
ACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCA > SRR4302541.3941967/1‑94 (MQ=23)
ACCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCA < SRR4302541.5353577/94‑1 (MQ=23)
CCTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCAT < SRR4302541.8391051/94‑1 (MQ=23)
CCTATCACTGCAT‑AAAGTAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCAT > SRR4302541.8679884/1‑94 (MQ=23)
CTATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATC > SRR4302541.4481835/1‑94 (MQ=23)
TATCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCA > SRR4302541.1969558/1‑94 (MQ=23)
TCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC < SRR4302541.8333602/94‑1 (MQ=23)
TCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC < SRR4302541.3096390/94‑1 (MQ=23)
TCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC < SRR4302541.4433271/94‑1 (MQ=23)
TCACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC < SRR4302541.4433272/94‑1 (MQ=23)
CACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCG > SRR4302541.5289788/1‑94 (MQ=23)
CACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCG > SRR4302541.8058638/1‑94 (MQ=23)
CACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCG < SRR4302541.7058721/94‑1 (MQ=23)
ACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGC > SRR4302541.6583967/1‑94 (MQ=23)
ACTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGC > SRR4302541.7279158/1‑94 (MQ=23)
CTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCT > SRR4302541.2557570/1‑94 (MQ=25)
CTGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCT > SRR4302541.8719114/1‑94 (MQ=25)
TGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT < SRR4302541.3798018/94‑1 (MQ=26)
TGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT > SRR4302541.932997/1‑94 (MQ=26)
TGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT > SRR4302541.681467/1‑94 (MQ=26)
TGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT > SRR4302541.4720154/1‑94 (MQ=26)
TGCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT > SRR4302541.1834900/1‑94 (MQ=26)
GCATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTT < SRR4302541.5070730/94‑1 (MQ=28)
CATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTG < SRR4302541.3712178/94‑1 (MQ=30)
CATAAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTG > SRR4302541.259572/1‑94 (MQ=30)
ataAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA > SRR4302541.7580347/4‑94 (MQ=33)
ataAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA < SRR4302541.8313156/91‑1 (MQ=33)
ataAAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA > SRR4302541.5491823/4‑94 (MQ=33)
A‑AAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATA < SRR4302541.5126128/94‑1 (MQ=36)
AAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG > SRR4302541.7180695/1‑94 (MQ=38)
AAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG < SRR4302541.3605955/94‑1 (MQ=38)
AAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG < SRR4302541.3216418/94‑1 (MQ=38)
AAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG < SRR4302541.8890563/94‑1 (MQ=38)
AAA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG > SRR4302541.5096756/1‑94 (MQ=38)
AA‑TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGT > SRR4302541.3563530/1‑94 (MQ=38)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT < SRR4302541.8550385/94‑1 (MQ=38)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT < SRR4302541.6289598/94‑1 (MQ=38)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT < SRR4302541.6735616/94‑1 (MQ=38)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT < SRR4302541.6635867/94‑1 (MQ=38)
AATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATG > SRR4302541.2947050/1‑94 (MQ=40)
AATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATG < SRR4302541.6655345/94‑1 (MQ=40)
AATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATG > SRR4302541.8892444/1‑94 (MQ=40)
AATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATG < SRR4302541.1025425/94‑1 (MQ=40)
ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGC > SRR4302541.5372608/1‑94 (MQ=42)
TGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCA > SRR4302541.449594/1‑94 (MQ=44)
GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCAT < SRR4302541.8541188/94‑1 (MQ=46)
GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCAT > SRR4302541.7060258/1‑94 (MQ=46)
GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCAT < SRR4302541.5011888/94‑1 (MQ=46)
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AAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAA‑TAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCAT > NC_000913/4474756‑4474914
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
