Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,255,425 |
T→C |
Y58C (TAC→TGC) |
yhaO ← |
putative transport system permease protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,255,425 | 0 | T | C | 99.5%
| 728.3
/ NA
| 211 | Y58C (TAC→TGC) | yhaO | putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (114/96); minor base G (1/0); total (115/96) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 211 total aligned reads displayed.
AACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGTAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATC > NC_000913/3255336‑3255514
|
aaCCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAAc > 2:469547/1‑93 (MQ=255)
aCCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAAcc > 1:1305041/1‑93 (MQ=255)
aCCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAAcc < 1:6059582/93‑1 (MQ=255)
aCCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAAcc < 2:5322398/93‑1 (MQ=255)
ccGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCa < 2:3231839/93‑1 (MQ=255)
ccGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCa > 1:2674534/1‑93 (MQ=255)
cGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCaa > 1:4392457/1‑93 (MQ=255)
cGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCaa > 2:3801090/1‑93 (MQ=255)
cTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATc < 2:3358288/93‑1 (MQ=255)
tAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCa > 1:1494953/1‑93 (MQ=255)
aaTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAc > 2:4242178/1‑93 (MQ=255)
aaTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAc < 2:6190893/93‑1 (MQ=255)
aaTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAc < 2:2437923/93‑1 (MQ=255)
aaTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAc > 2:6317090/1‑93 (MQ=255)
aTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAcc > 1:1363004/1‑93 (MQ=255)
aTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAcc < 2:2613041/93‑1 (MQ=255)
tGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCg < 1:772391/93‑1 (MQ=255)
gACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGa < 2:289283/93‑1 (MQ=255)
aCGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGAt < 1:2343698/93‑1 (MQ=255)
cGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATg < 2:6095782/93‑1 (MQ=255)
gCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATga > 2:4278583/1‑93 (MQ=255)
cTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATgag < 1:3094350/93‑1 (MQ=255)
gggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGc < 1:2261368/93‑1 (MQ=255)
gggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGc > 1:2520051/1‑93 (MQ=255)
gggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGc < 2:2878551/93‑1 (MQ=255)
ggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCa < 1:910170/93‑1 (MQ=255)
ggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCa > 1:5570567/1‑93 (MQ=255)
aaTCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCaaaa > 1:5871400/1‑93 (MQ=255)
aTCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCaaaaa > 1:3992482/1‑93 (MQ=255)
tttACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATAc > 2:4920902/1‑93 (MQ=255)
ttACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATAcc > 1:5944855/1‑93 (MQ=255)
tACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATAccc < 2:2062809/93‑1 (MQ=255)
cATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGAGGAACCAATCACCGATGAGAGCAAAAATACCcac > 2:6368678/1‑93 (MQ=255)
aTTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCcaca > 2:6004529/1‑93 (MQ=255)
ttCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAACATACCCACaa > 1:1039851/1‑93 (MQ=255)
ttCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCAGGGCACCCAATCACCGATGAGAGCAAAAATACACACaa > 1:2075696/1‑93 (MQ=255)
tGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATcc < 2:1575752/93‑1 (MQ=255)
tGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATcc < 2:1440025/93‑1 (MQ=255)
ggTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATccc > 2:2496593/1‑93 (MQ=255)
ggTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATccc > 1:307418/1‑93 (MQ=255)
gTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCa > 2:1271355/1‑93 (MQ=255)
gTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCa > 1:4145890/1‑93 (MQ=255)
tGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCAt < 2:4575331/93‑1 (MQ=255)
gATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATc < 2:3424784/93‑1 (MQ=255)
cTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAAc < 2:4215156/93‑1 (MQ=255)
tGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAAcc < 1:5515783/93‑1 (MQ=255)
tGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAAcc < 1:1610222/93‑1 (MQ=255)
gCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCg < 2:5546443/93‑1 (MQ=255)
cAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGAc < 2:744134/93‑1 (MQ=255)
gCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCt > 1:351498/1‑93 (MQ=255)
cGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTg < 2:5034516/93‑1 (MQ=255)
ctATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCACCCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGc < 2:4022813/92‑1 (MQ=255)
tATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCa > 1:5392680/1‑93 (MQ=255)
aTTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATAAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCAc < 2:2203349/93‑1 (MQ=255)
ttAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCAcc > 2:1802363/1‑93 (MQ=255)
taataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCg < 2:2455351/93‑1 (MQ=255)
aataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCAcccg > 2:787922/1‑91 (MQ=255)
aataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCgg < 1:3114194/93‑1 (MQ=255)
ataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCggg < 1:4974502/93‑1 (MQ=255)
ataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCggg < 2:2841718/93‑1 (MQ=255)
ataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCggg < 2:5409145/93‑1 (MQ=255)
taaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGga < 2:4387228/93‑1 (MQ=255)
taaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGga < 1:10856/93‑1 (MQ=255)
taaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGga > 1:4229008/1‑93 (MQ=255)
taaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGga > 1:2476114/1‑93 (MQ=255)
aaaCAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGgag > 1:3296245/1‑93 (MQ=255)
aaaCAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGgag > 1:5534402/1‑93 (MQ=255)
aaCAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGgaga > 1:689821/1‑93 (MQ=255)
aCAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGaa > 2:3073308/1‑93 (MQ=255)
cAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGaaa < 2:4491436/93‑1 (MQ=255)
aaTCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGaaaa > 1:4692181/1‑93 (MQ=255)
aTCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGaaaaa > 1:1699502/1‑93 (MQ=255)
cGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACa < 1:2288718/93‑1 (MQ=255)
gCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACaa > 1:3646994/1‑93 (MQ=255)
gCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACaa > 1:2709344/1‑93 (MQ=255)
gAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcc < 2:2638215/93‑1 (MQ=255)
gAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcc > 1:1986644/1‑93 (MQ=255)
aaaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATccc < 2:5606380/93‑1 (MQ=255)
aaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcccc > 1:3226455/1‑93 (MQ=255)
aaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcccc > 2:2305952/1‑93 (MQ=255)
aaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcccc > 1:4526035/1‑93 (MQ=255)
aaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcccc < 1:6337398/93‑1 (MQ=255)
aCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCcg > 1:46220/1‑93 (MQ=255)
cAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACTGGGAGAAAAACAATCCCcgc > 2:6427024/1‑93 (MQ=255)
cAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCcgc > 1:1765003/1‑93 (MQ=255)
aGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCcgcg > 1:6145996/1‑93 (MQ=255)
gATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCgcgc < 1:2443459/93‑1 (MQ=255)
gATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCgcgc > 1:2303070/1‑93 (MQ=255)
gATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCgcgc > 1:3643633/1‑93 (MQ=255)
aTACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATGCCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGcc < 2:5780823/93‑1 (MQ=255)
aTACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGcc > 2:91295/1‑93 (MQ=255)
aCATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCaa < 2:6194790/93‑1 (MQ=255)
cATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAAt < 1:6209137/93‑1 (MQ=255)
cATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAAt < 2:3497958/93‑1 (MQ=255)
aTTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATc < 1:4356137/93‑1 (MQ=255)
ttGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCg > 2:5276080/1‑93 (MQ=255)
ttGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCg < 2:2112144/93‑1 (MQ=255)
gCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGcc > 2:3250023/1‑93 (MQ=255)
ccGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCa > 2:166722/1‑93 (MQ=255)
gggCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATc < 1:3010331/93‑1 (MQ=255)
|
AACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGTAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATC > NC_000913/3255336‑3255514
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATAACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGTAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATCCCGA > NC_000913/3255332‑3255518
|
AAATAACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGC > SRR4302534.4489545/1‑94 (MQ=60)
AATAACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCA > SRR4302534.723301/1‑94 (MQ=60)
AACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACC > SRR4302534.5878112/1‑94 (MQ=60)
AACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACC > SRR4302534.5675791/1‑94 (MQ=60)
AACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACC < SRR4302534.2526397/94‑1 (MQ=60)
AACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACC > SRR4302534.1339466/1‑94 (MQ=60)
ACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCA > SRR4302534.2745248/1‑94 (MQ=60)
ACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCA < SRR4302534.6224353/94‑1 (MQ=60)
CCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAA > SRR4302534.4510917/1‑94 (MQ=60)
CGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAAT < SRR4302534.1525187/94‑1 (MQ=60)
CTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCA > SRR4302534.1534279/1‑94 (MQ=60)
CTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCA < SRR4302534.758058/94‑1 (MQ=60)
AATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACC > SRR4302534.1398918/1‑94 (MQ=60)
AATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACC < SRR4302534.4275496/94‑1 (MQ=60)
AATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACC > SRR4302534.3383911/1‑94 (MQ=60)
TGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGA < SRR4302534.791625/94‑1 (MQ=60)
TGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGA > SRR4302534.5654680/1‑94 (MQ=60)
GACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGAT < SRR4302534.421938/94‑1 (MQ=60)
ACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATG > SRR4302534.6155688/1‑94 (MQ=60)
ACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATG < SRR4302534.2405895/94‑1 (MQ=60)
CGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGA > SRR4302534.1794053/1‑94 (MQ=60)
CGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGA < SRR4302534.6083237/94‑1 (MQ=60)
CTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGA < SRR4302534.3175751/94‑1 (MQ=60)
CTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGA > SRR4302534.2245750/1‑94 (MQ=60)
TCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAG > SRR4302534.4410662/1‑94 (MQ=60)
CGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGC > SRR4302534.2586953/1‑94 (MQ=60)
GGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCA > SRR4302534.5720992/1‑94 (MQ=60)
GGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCA < SRR4302534.2321333/94‑1 (MQ=60)
GGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAA < SRR4302534.933307/94‑1 (MQ=60)
GGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAA < SRR4302534.3023073/94‑1 (MQ=60)
TAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAA > SRR4302534.6030814/1‑94 (MQ=60)
AATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAA > SRR4302534.4099353/1‑94 (MQ=60)
CTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATAC > SRR4302534.887050/1‑94 (MQ=60)
TTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACC < SRR4302534.2034113/94‑1 (MQ=60)
TTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACC > SRR4302534.6106265/1‑94 (MQ=60)
CATTCTGGTGATTCTGCCAGCGTATTAATAAACAACCGCTGAACAAGATACATTGCCGGGCAACCAATCACCGATGAGGGAAAAAATCCCAACA > SRR4302534.4307780/1‑94 (MQ=60)
ATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAACATACCCACAA > SRR4302534.1066693/1‑94 (MQ=60)
ATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCAGGGCACCCAATCACCGATGAGAGCAAAAATACACACAA > SRR4302534.2130042/1‑94 (MQ=60)
TTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAAT > SRR4302534.297942/1‑94 (MQ=60)
TCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATC > SRR4302534.5382250/1‑94 (MQ=60)
CTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCC < SRR4302534.2202384/94‑1 (MQ=60)
CTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACAATGCCGGTCAACCAATCAACGATGAGAGCAAAAATAaccatcatcc > SRR4302534.4734266/1‑84 (MQ=60)
TGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCC > SRR4302534.315350/1‑94 (MQ=60)
TGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACACACAATCCC > SRR4302534.684621/1‑94 (MQ=60)
GGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCA > SRR4302534.4257789/1‑94 (MQ=60)
GTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCAT < SRR4302534.2555362/94‑1 (MQ=60)
TGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGCTGAGAGCACATATACCCACAATCCCATC > SRR4302534.1080126/1‑94 (MQ=60)
TGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATC < SRR4302534.2115130/94‑1 (MQ=60)
CTGCCAGCGAATTAATAAACTATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACC > SRR4302534.6495768/1‑94 (MQ=60)
TGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCG < SRR4302534.1652260/94‑1 (MQ=60)
TGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCG > SRR4302534.4746349/1‑94 (MQ=60)
TGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCG < SRR4302534.5468722/94‑1 (MQ=60)
TGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCG < SRR4302534.1736863/94‑1 (MQ=60)
TGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCG < SRR4302534.5664604/94‑1 (MQ=60)
CCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGAC > SRR4302534.4599320/1‑94 (MQ=60)
CAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACC > SRR4302534.2352162/1‑94 (MQ=60)
AGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCT > SRR4302534.360500/1‑94 (MQ=60)
GCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTG < SRR4302534.4475605/94‑1 (MQ=60)
GTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCA > SRR4302534.5537892/1‑94 (MQ=60)
GTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCA > SRR4302534.6262329/1‑94 (MQ=60)
TATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCAC > SRR4302534.3121174/1‑94 (MQ=60)
TATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCAC > SRR4302534.2377235/1‑94 (MQ=60)
ATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACC < SRR4302534.3744223/94‑1 (MQ=60)
AATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGG < SRR4302534.3907027/94‑1 (MQ=60)
AATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGG < SRR4302534.3196097/94‑1 (MQ=60)
ATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGA < SRR4302534.5109165/94‑1 (MQ=60)
ATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGA < SRR4302534.3163419/94‑1 (MQ=60)
ATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGA > SRR4302534.4342965/1‑94 (MQ=60)
ATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGA > SRR4302534.2541913/1‑94 (MQ=60)
TAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAG > SRR4302534.5683789/1‑94 (MQ=60)
TAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAG < SRR4302534.11130/94‑1 (MQ=60)
TAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAG > SRR4302534.3384181/1‑94 (MQ=60)
AAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGA > SRR4302534.706684/1‑94 (MQ=60)
ACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAA > SRR4302534.476603/1‑94 (MQ=60)
ACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAA > SRR4302534.3415383/1‑94 (MQ=60)
CAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAA > SRR4302534.4819547/1‑94 (MQ=60)
AATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAA > SRR4302534.3182733/1‑94 (MQ=60)
AATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAA > SRR4302534.1743662/1‑94 (MQ=60)
ATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAAC > SRR4302534.2607249/1‑94 (MQ=60)
CGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAA > SRR4302534.2459311/1‑94 (MQ=60)
CGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAA > SRR4302534.2780872/1‑94 (MQ=60)
CGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAA < SRR4302534.2349458/94‑1 (MQ=60)
CGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAA > SRR4302534.3744989/1‑94 (MQ=60)
CTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATC > SRR4302534.6364895/1‑94 (MQ=60)
CTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATC < SRR4302534.4852108/94‑1 (MQ=60)
CTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCAAAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATC > SRR4302534.2333970/1‑94 (MQ=60)
TGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCC > SRR4302534.2038664/1‑94 (MQ=60)
AAAACAGATACATGCCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCCCAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCC < SRR4302534.1217003/94‑1 (MQ=60)
AAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCC > SRR4302534.3312157/1‑94 (MQ=60)
AAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCC > SRR4302534.4648649/1‑94 (MQ=60)
AAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCC < SRR4302534.3229286/94‑1 (MQ=60)
AACAGATACATTGCCGGGCATCCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCG > SRR4302534.6488800/1‑94 (MQ=60)
AACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCG < SRR4302534.6508593/94‑1 (MQ=60)
AACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCG > SRR4302534.47453/1‑94 (MQ=60)
ACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGC > SRR4302534.1810821/1‑94 (MQ=60)
CAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGGGAAAAACAATCCCCGCG < SRR4302534.5720661/94‑1 (MQ=60)
CAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCG > SRR4302534.6313130/1‑94 (MQ=60)
AGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGC > SRR4302534.3741554/1‑94 (MQ=60)
AGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGC > SRR4302534.2364201/1‑94 (MQ=60)
GATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCC < SRR4302534.2508401/94‑1 (MQ=60)
TACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAA > SRR4302534.3614250/1‑94 (MQ=60)
CATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATC < SRR4302534.6377918/94‑1 (MQ=60)
ATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCG < SRR4302534.1363252/94‑1 (MQ=60)
ATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCG < SRR4302534.4473699/94‑1 (MQ=60)
CCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCAT < SRR4302534.1555016/94‑1 (MQ=60)
CGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATC > SRR4302534.2771409/1‑94 (MQ=60)
CGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATC > SRR4302534.40115/1‑94 (MQ=60)
GGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATCC < SRR4302534.3089100/94‑1 (MQ=60)
GGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATCC > SRR4302534.1468762/1‑94 (MQ=60)
GGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATCCC < SRR4302534.2958919/94‑1 (MQ=60)
GGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATCCC < SRR4302534.5568726/94‑1 (MQ=60)
CAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGACAAACAATCCCCGCGCCAATCGCCATCCAGA > SRR4302534.3562840/1‑94 (MQ=60)
CAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATCCCGA < SRR4302534.626144/94‑1 (MQ=60)
|
AAATAACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGTAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATCCCGA > NC_000913/3255332‑3255518
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
