Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,345,093 |
A→G |
E113G (GAA→GGA) |
yhbJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,345,093 | 0 | A | G | 99.6%
| 847.1
/ NA
| 246 | E113G (GAA→GGA) | yhbJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (125/119); total (125/121) |
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 254 total aligned reads displayed.
TGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCAC > NC_000913/3345003‑3345181
|
tGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGgaa > 2:186494/1‑93 (MQ=255)
tGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGgaa < 1:367773/93‑1 (MQ=255)
tGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGgaa < 2:4254800/93‑1 (MQ=255)
tCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTg > 2:3100431/1‑93 (MQ=255)
cTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCt > 2:6109495/1‑93 (MQ=255)
ggATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTAt < 1:5368119/93‑1 (MQ=255)
gATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATc > 2:6140725/1‑93 (MQ=255)
gATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATc < 1:1655001/93‑1 (MQ=255)
tGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGa < 2:5915808/93‑1 (MQ=255)
tGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGa > 1:2275994/1‑93 (MQ=255)
ccGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACa > 2:4688469/1‑93 (MQ=255)
cGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaa > 1:6442129/1‑93 (MQ=255)
gACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCTCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaa < 2:4534859/93‑1 (MQ=255)
gACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaa < 1:391336/93‑1 (MQ=255)
ggaaTACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaagaaa > 1:6383618/3‑93 (MQ=255)
gTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaagaaa > 1:5015386/1‑93 (MQ=255)
tAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACaaagaaag > 2:4572719/1‑93 (MQ=255)
aTACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCg > 1:1176300/1‑93 (MQ=255)
tACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGa < 2:5645775/93‑1 (MQ=255)
tACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGa > 2:6444289/1‑93 (MQ=255)
aCCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAt > 2:4185850/1‑93 (MQ=255)
aCCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAt > 1:3112623/1‑93 (MQ=255)
cTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAttt > 1:1014893/1‑93 (MQ=255)
ttAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTg < 2:6244753/93‑1 (MQ=255)
aTTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTg > 2:2863212/1‑93 (MQ=255)
aTTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTg < 2:3434405/93‑1 (MQ=255)
tcgtcgTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGa < 2:1585295/93‑1 (MQ=255)
cgtcgtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAg > 2:1055889/1‑93 (MQ=255)
tcgtTACATTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGcc < 1:4794488/93‑1 (MQ=255)
tcgtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGcc < 1:3401535/93‑1 (MQ=255)
tcgtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGcc < 2:2723231/93‑1 (MQ=255)
tcgtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGcc < 1:1759280/93‑1 (MQ=255)
tcgtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGcc < 1:2154444/93‑1 (MQ=255)
gtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCctc > 2:582778/1‑93 (MQ=255)
gtTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAGTTGCTGGAGCctc > 2:2538258/1‑93 (MQ=255)
ttACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCctct < 2:3415092/93‑1 (MQ=255)
ttACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCctct < 1:2744792/93‑1 (MQ=255)
ttACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCctct > 2:2560160/1‑93 (MQ=255)
tACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTg > 1:5407414/1‑93 (MQ=255)
tACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTg < 2:3964657/93‑1 (MQ=255)
tACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTg < 2:4465522/93‑1 (MQ=255)
tACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGCAGCCTCTg > 1:1369989/1‑93 (MQ=255)
aCAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGc > 2:3290748/1‑93 (MQ=255)
aCAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGc < 2:2991336/93‑1 (MQ=255)
cAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCg > 2:2465589/1‑93 (MQ=255)
gTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGTCTCTGCGtt > 1:6137050/1‑93 (MQ=255)
gTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGtt > 2:133501/1‑93 (MQ=255)
gTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGtt > 1:6195619/1‑93 (MQ=255)
gTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGtt < 2:546274/93‑1 (MQ=255)
acGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGa > 1:2998206/1‑93 (MQ=255)
cgcCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCg < 1:755862/93‑1 (MQ=255)
gcCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCgg < 1:4969105/93‑1 (MQ=255)
gACTGCATCCGCTTTCCAGCAAAACCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATc < 1:5282755/93‑1 (MQ=255)
gACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATc < 1:2467954/93‑1 (MQ=255)
aCTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCt > 1:1024669/1‑93 (MQ=255)
aCTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCt > 1:5573269/1‑93 (MQ=255)
aCTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCt > 1:6358448/1‑93 (MQ=255)
cTGCATCCGCTTTCCAGCAAAAACCTTTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTg < 1:4484549/93‑1 (MQ=255)
cTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTg < 1:1980395/93‑1 (MQ=255)
cTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTg > 1:5197311/1‑93 (MQ=255)
tGCATCCGCTTTCCAGCAAAACCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGa < 2:4722172/93‑1 (MQ=255)
gCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAt > 1:3984284/1‑93 (MQ=255)
cATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAtt > 1:5953324/1‑93 (MQ=255)
aTCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTg > 2:231175/1‑93 (MQ=255)
aTCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTg > 2:1404183/1‑93 (MQ=255)
aTCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTg < 1:2565681/93‑1 (MQ=255)
tCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGt > 2:3698464/1‑93 (MQ=255)
tCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGt > 1:1576833/1‑93 (MQ=255)
cGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCg > 2:1732394/1‑93 (MQ=255)
gCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGa > 1:1276382/1‑93 (MQ=255)
gCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTAGa > 2:5207901/1‑93 (MQ=255)
gCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGa < 2:6284641/93‑1 (MQ=255)
tttCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATa > 2:4446794/1‑93 (MQ=255)
tttCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATa > 1:1341990/1‑93 (MQ=255)
ccAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCt < 1:2485878/93‑1 (MQ=255)
ccAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCt < 2:6054419/93‑1 (MQ=255)
ccAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCt < 2:1048979/93‑1 (MQ=255)
ccAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCt > 2:1648346/1‑93 (MQ=255)
ccAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCt < 1:629546/93‑1 (MQ=255)
aGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCa < 2:3910499/93‑1 (MQ=255)
aGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCa > 2:210642/1‑93 (MQ=255)
aGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCa < 2:2132627/93‑1 (MQ=255)
gCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAg > 1:5826632/1‑93 (MQ=255)
gCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGAGGTTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCat > 1:927087/1‑92 (MQ=255)
aaaaCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGaaa < 2:5733371/93‑1 (MQ=255)
aaaCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAAt > 1:6079524/1‑93 (MQ=255)
aaCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATg > 1:5059553/1‑93 (MQ=255)
aCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGt > 2:1760001/1‑93 (MQ=255)
ccTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTc < 1:3578423/93‑1 (MQ=255)
ccTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTc > 1:2707802/1‑93 (MQ=255)
cTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTcc > 1:4240170/1‑93 (MQ=255)
tGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCg < 1:6477271/93‑1 (MQ=255)
gTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGt > 1:218605/1‑93 (MQ=255)
cGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTc < 2:5008694/93‑1 (MQ=255)
cGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTc < 2:4884941/93‑1 (MQ=255)
gCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCa < 1:37924/93‑1 (MQ=255)
gCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCa > 1:4636752/1‑93 (MQ=255)
cTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCAc > 2:3260528/1‑93 (MQ=255)
cTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCAc < 1:3169349/93‑1 (MQ=255)
cTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCAc > 1:965419/1‑93 (MQ=255)
|
TGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCAC > NC_000913/3345003‑3345181
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGAGCT > NC_000913/3345000‑3345186
|
TCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCAGCTTGCCAGCAAAAACCTGTCGCTGGG > SRR4302534.350142/1‑94 (MQ=60)
CTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAA < SRR4302534.2805129/94‑1 (MQ=60)
CTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAA < SRR4302534.4531837/94‑1 (MQ=60)
TGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAG < SRR4302534.377152/94‑1 (MQ=60)
TTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTG < SRR4302534.5524984/94‑1 (MQ=60)
TTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTG < SRR4302534.738025/94‑1 (MQ=60)
CTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTA < SRR4302534.856298/94‑1 (MQ=60)
CTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTA > SRR4302534.5118079/1‑94 (MQ=60)
TGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTAT > SRR4302534.13043/1‑94 (MQ=60)
GGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATC < SRR4302534.5512790/94‑1 (MQ=60)
GGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATC < SRR4302534.386040/94‑1 (MQ=60)
GATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCG < SRR4302534.1698133/94‑1 (MQ=60)
ATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGA > SRR4302534.2336388/1‑94 (MQ=60)
GCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCCACA > SRR4302534.6575448/1‑94 (MQ=60)
CCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAA > SRR4302534.6615740/1‑94 (MQ=60)
CCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAA > SRR4302534.5327403/1‑94 (MQ=60)
CGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAA > SRR4302534.4072822/1‑94 (MQ=60)
GACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAG < SRR4302534.401341/94‑1 (MQ=60)
CGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAA > SRR4302534.5150920/1‑94 (MQ=60)
CGGAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAA > SRR4302534.6556061/1‑94 (MQ=60)
AATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCG > SRR4302534.1207219/1‑94 (MQ=60)
AATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCAAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCG > SRR4302534.5434565/1‑94 (MQ=60)
ATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGA > SRR4302534.6584663/1‑94 (MQ=60)
ATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGA > SRR4302534.1805925/1‑94 (MQ=60)
TACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAT < SRR4302534.6282026/94‑1 (MQ=60)
TACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGAT > SRR4302534.3194478/1‑94 (MQ=60)
ACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATT > SRR4302534.888595/1‑94 (MQ=60)
ACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATT > SRR4302534.1075122/1‑94 (MQ=60)
CCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTT > SRR4302534.307562/1‑94 (MQ=60)
CCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTT > SRR4302534.2358200/1‑94 (MQ=60)
CCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTT > SRR4302534.1041013/1‑94 (MQ=60)
CTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTG < SRR4302534.2345380/94‑1 (MQ=60)
CTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTG > SRR4302534.6143876/1‑94 (MQ=60)
CTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTG < SRR4302534.6396040/94‑1 (MQ=60)
CTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTG > SRR4302534.4548551/1‑94 (MQ=60)
TTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGC > SRR4302534.5148444/1‑94 (MQ=60)
TAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCT < SRR4302534.3690218/94‑1 (MQ=60)
ATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGG < SRR4302534.2235813/94‑1 (MQ=60)
ATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGG < SRR4302534.1346934/94‑1 (MQ=60)
TCGTTACATTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCT < SRR4302534.4924665/94‑1 (MQ=60)
TCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCT < SRR4302534.6064600/94‑1 (MQ=60)
TCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCT < SRR4302534.1804929/94‑1 (MQ=60)
TCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCT < SRR4302534.3492861/94‑1 (MQ=60)
TCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCT < SRR4302534.2211317/94‑1 (MQ=60)
TCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCT < SRR4302534.3231134/94‑1 (MQ=60)
CGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTC > SRR4302534.96060/1‑94 (MQ=60)
TTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTG > SRR4302534.5552909/1‑94 (MQ=60)
TTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTG < SRR4302534.2817090/94‑1 (MQ=60)
TTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGCAGCCTCTG > SRR4302534.1406093/1‑94 (MQ=60)
TACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGC < SRR4302534.6326383/94‑1 (MQ=60)
AGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGTCTCTGCGTT > SRR4302534.6303983/1‑94 (MQ=60)
AGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTT < SRR4302534.4783477/94‑1 (MQ=60)
AGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTT > SRR4302534.2675417/1‑94 (MQ=60)
AGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTT > SRR4302534.6364191/1‑94 (MQ=60)
AGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGGCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTT > SRR4302534.6303984/1‑94 (MQ=60)
AGTGACACGCGCCGACTGCACCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTT > SRR4302534.6487703/1‑94 (MQ=60)
GTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTC > SRR4302534.1045218/1‑94 (MQ=60)
GTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTC < SRR4302534.3395651/94‑1 (MQ=60)
CACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGA > SRR4302534.3076615/1‑94 (MQ=60)
CACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGA < SRR4302534.5397331/94‑1 (MQ=60)
ACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAG < SRR4302534.3481751/94‑1 (MQ=60)
GCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCG < SRR4302534.305054/94‑1 (MQ=60)
CGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACACAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGG > SRR4302534.2788372/1‑94 (MQ=60)
CGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGG < SRR4302534.3651/94‑1 (MQ=60)
CGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGG > SRR4302534.5719494/1‑94 (MQ=60)
CGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGG < SRR4302534.774602/94‑1 (MQ=60)
GCCGACTGCATCCTCTTTCCAGCAAAACCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGA < SRR4302534.5508527/94‑1 (MQ=60)
GCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGA < SRR4302534.5103644/94‑1 (MQ=60)
GCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGA > SRR4302534.278487/1‑94 (MQ=60)
CCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGAT < SRR4302534.3896886/94‑1 (MQ=60)
CGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATC > SRR4302534.2550148/1‑94 (MQ=60)
CGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATC > SRR4302534.2159522/1‑94 (MQ=60)
CGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATC > SRR4302534.1483936/1‑94 (MQ=60)
GACTGCATCCGCTTTCCAGCAAAACCCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCT < SRR4302534.5425385/94‑1 (MQ=60)
GACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCT > SRR4302534.5723787/1‑94 (MQ=60)
GACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCT > SRR4302534.1051056/1‑94 (MQ=60)
GACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCT < SRR4302534.663090/94‑1 (MQ=60)
GACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCT > SRR4302534.6530166/1‑94 (MQ=60)
GACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCT < SRR4302534.2533555/94‑1 (MQ=60)
ACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTG > SRR4302534.1405391/1‑94 (MQ=60)
ACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTG > SRR4302534.5337477/1‑94 (MQ=60)
CTGCATCCGCTTTCCAGCAAAAACCTTTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGA < SRR4302534.4605883/94‑1 (MQ=60)
CTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGA < SRR4302534.2032246/94‑1 (MQ=60)
TGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAT < SRR4302534.1315157/94‑1 (MQ=60)
TGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGAT > SRR4302534.4090904/1‑94 (MQ=60)
GCATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATT > SRR4302534.6114978/1‑94 (MQ=60)
CATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTG < SRR4302534.4874402/94‑1 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT < SRR4302534.2633673/94‑1 (MQ=60)
ATCCGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGT > SRR4302534.1618089/1‑94 (MQ=60)
TCCGCTTCCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTC < SRR4302534.4312991/94‑1 (MQ=60)
CGCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGA > SRR4302534.1309971/1‑94 (MQ=60)
GCTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGAT > SRR4302534.4410571/1‑94 (MQ=60)
CTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGCGCGGATCTGATTGTCGATA > SRR4302534.5969696/1‑94 (MQ=60)
CTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGCTCTGTTTGTTGATA > SRR4302534.1780220/1‑94 (MQ=60)
CTTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATA > SRR4302534.1377368/1‑94 (MQ=60)
TTTCCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATAC > SRR4302534.3760104/1‑94 (MQ=60)
TTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCAATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATAC < SRR4302534.4017632/94‑1 (MQ=60)
CCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTC < SRR4302534.2551915/94‑1 (MQ=60)
CCAGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTC < SRR4302534.644815/94‑1 (MQ=60)
AGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAG > SRR4302534.1071313/1‑94 (MQ=60)
AGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAG > SRR4302534.5930355/1‑94 (MQ=60)
AGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAG > SRR4302534.5984786/1‑94 (MQ=60)
AGCAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGAGGTTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAT > SRR4302534.950687/1‑94 (MQ=60)
CAAAAACCTGTCGCTGGGAGGTGCTATCGACAAAGAAAGCGATTTGCTCGGGCCTCTGCGTTCGCGAGCGGATCTGATTGGCGATACCTGAGAA > SRR4302534.721932/1‑94 (MQ=60)
CAAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAA > SRR4302534.2586115/1‑94 (MQ=60)
AAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAA > SRR4302534.652536/1‑94 (MQ=60)
AAAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAA > SRR4302534.1676526/1‑94 (MQ=60)
AAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAAT > SRR4302534.5582740/1‑94 (MQ=60)
AAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAAT > SRR4302534.2573797/1‑94 (MQ=60)
AAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAAT > SRR4302534.6244869/1‑94 (MQ=60)
AAAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAAT > SRR4302534.748746/1‑94 (MQ=60)
AAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTGAGAAATG > SRR4302534.4077796/1‑94 (MQ=60)
AAACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATG > SRR4302534.5196198/1‑94 (MQ=60)
AACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGT > SRR4302534.5042400/1‑94 (MQ=60)
AACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGT > SRR4302534.1780172/1‑94 (MQ=60)
ACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTC < SRR4302534.2268136/94‑1 (MQ=60)
ACCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTC > SRR4302534.2779302/1‑94 (MQ=60)
CCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCC < SRR4302534.2282412/94‑1 (MQ=60)
CCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCC < SRR4302534.3674674/94‑1 (MQ=60)
CCTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCC > SRR4302534.4354492/1‑94 (MQ=60)
CTGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCG < SRR4302534.4638545/94‑1 (MQ=60)
TGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGT > SRR4302534.224336/1‑94 (MQ=60)
TGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGT < SRR4302534.6651804/94‑1 (MQ=60)
TGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGT < SRR4302534.6128653/94‑1 (MQ=60)
TGTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGT < SRR4302534.5161229/94‑1 (MQ=60)
GTCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTT < SRR4302534.5220539/94‑1 (MQ=60)
TCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTC < SRR4302534.1000164/94‑1 (MQ=60)
TCGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTC < SRR4302534.2197520/94‑1 (MQ=60)
CGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCA > SRR4302534.1517092/1‑94 (MQ=60)
CGCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCA > SRR4302534.4762568/1‑94 (MQ=60)
GCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCAC < SRR4302534.38937/94‑1 (MQ=60)
GCTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCAC > SRR4302534.990020/1‑94 (MQ=60)
GCTGGGAAGGGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCAC > SRR4302534.6481601/1‑94 (MQ=60)
CTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACG < SRR4302534.3252952/94‑1 (MQ=60)
CTGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACG < SRR4302534.3132629/94‑1 (MQ=60)
TGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGA > SRR4302534.3702048/1‑94 (MQ=60)
TGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGA > SRR4302534.700407/1‑94 (MQ=60)
TGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGA > SRR4302534.3893978/1‑94 (MQ=60)
TGGGAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGA > SRR4302534.6093896/1‑94 (MQ=60)
GAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGAGCT < SRR4302534.414690/94‑1 (MQ=60)
|
TCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGAGCT > NC_000913/3345000‑3345186
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
