Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,570,076 |
T→C |
T354A (ACG→GCG) |
glgB ← |
1,4‑alpha‑glucan branching enzyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,570,076 | 0 | T | C | 100.0%
| 971.7
/ NA
| 281 | T354A (ACG→GCG) | glgB | 1,4‑alpha‑glucan branching enzyme |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/154); total (127/154) |
Only 100 of 286 total aligned reads displayed.
TACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGG > NC_000913/3569986‑3570165
|
aCTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGcc < 1:2811500/93‑1 (MQ=255)
tGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCAt < 1:1235114/93‑1 (MQ=255)
tGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCAt > 2:6404441/1‑93 (MQ=255)
cACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAAtt > 2:195172/1‑93 (MQ=255)
cACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAAtt < 1:1960339/93‑1 (MQ=255)
aCGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTc < 2:1673138/93‑1 (MQ=255)
aCGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTc < 1:1570978/93‑1 (MQ=255)
aCGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTc < 2:564766/93‑1 (MQ=255)
cGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCg < 1:1890654/93‑1 (MQ=255)
gCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCACATTCGGc > 1:3562252/1‑93 (MQ=255)
gCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGc > 2:2292911/1‑93 (MQ=255)
cGACCATACTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCa > 1:6303028/1‑93 (MQ=255)
gACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCaa > 1:1477883/1‑93 (MQ=255)
aCCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAg > 2:2740926/1‑93 (MQ=255)
aCCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAg > 1:6438404/1‑93 (MQ=255)
ccATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAgc > 2:5255213/1‑93 (MQ=255)
ccATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAgc < 1:907351/93‑1 (MQ=255)
cATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAgcg > 1:4324249/1‑93 (MQ=255)
cATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAgcg > 2:1658563/1‑93 (MQ=255)
aGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCaa < 2:2642011/93‑1 (MQ=255)
gTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACTAGTTCGCGCCATCAAATTCGGCAAGCGCaaa > 1:396984/1‑93 (MQ=255)
ttGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAg < 1:2231082/93‑1 (MQ=255)
gTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtc < 2:4638144/93‑1 (MQ=255)
gTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtc < 1:3040161/93‑1 (MQ=255)
gTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtc < 1:1858827/93‑1 (MQ=255)
aGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtcat > 1:60931/1‑93 (MQ=255)
aGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtcat > 1:2348883/1‑93 (MQ=255)
aGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtcat < 1:6123052/93‑1 (MQ=255)
gATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtcatc < 1:415258/93‑1 (MQ=255)
aTCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAGGtcatca < 1:2699755/93‑1 (MQ=255)
aTCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtcatca > 2:5742648/1‑93 (MQ=255)
aTCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtcatca < 1:941051/93‑1 (MQ=255)
aTCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGtcatca < 1:822895/93‑1 (MQ=255)
cAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGt < 1:3771792/93‑1 (MQ=255)
aGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTc < 1:3529358/93‑1 (MQ=255)
gCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCg < 1:2618919/93‑1 (MQ=255)
gtgtTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCggg > 2:4176306/1‑93 (MQ=255)
tgtTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGa < 1:3397804/93‑1 (MQ=255)
gtTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGaa < 1:3636265/93‑1 (MQ=255)
gtTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGaa > 2:5532516/1‑93 (MQ=255)
ttCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAg > 2:1832283/1‑93 (MQ=255)
ttCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAg < 2:47043/93‑1 (MQ=255)
tCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGt < 2:328515/93‑1 (MQ=255)
tCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGt < 1:1255936/93‑1 (MQ=255)
tCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCAGGAAGt < 1:1765020/93‑1 (MQ=255)
ccAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTg < 1:714539/93‑1 (MQ=255)
ccAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTg < 2:1113865/93‑1 (MQ=255)
aGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGc < 2:4692585/93‑1 (MQ=255)
gTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGcc > 2:6280078/1‑93 (MQ=255)
tCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCt < 2:2878408/93‑1 (MQ=255)
ccTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTg < 2:4128970/93‑1 (MQ=255)
cTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTgg > 1:2563412/1‑93 (MQ=255)
cTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTgg > 2:2249735/1‑93 (MQ=255)
atgatAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCAc > 1:5579164/1‑93 (MQ=255)
gatAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCAccc < 2:1494778/93‑1 (MQ=255)
gatAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCAccc < 2:5161247/93‑1 (MQ=255)
atAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCa > 2:1442748/1‑93 (MQ=255)
ccTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCg < 1:447923/93‑1 (MQ=255)
cTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCATGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCga < 2:3443989/93‑1 (MQ=255)
ttCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCgag > 1:660942/1‑93 (MQ=255)
tCACGCGGATCTCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCgaga < 1:2394053/93‑1 (MQ=255)
cACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGaa > 2:270633/1‑93 (MQ=255)
aCGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAAt > 1:6004961/1‑93 (MQ=255)
gcgGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAAtta < 1:4056526/93‑3 (MQ=255)
gcgGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCa < 2:2196580/93‑1 (MQ=255)
cgGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCAc < 1:4278606/93‑1 (MQ=255)
ggATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACg < 1:2619554/93‑1 (MQ=255)
gATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGt > 1:5802854/1‑93 (MQ=255)
aTCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGtt < 1:2486528/93‑1 (MQ=255)
aTCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGtt > 1:4765634/1‑93 (MQ=255)
aTCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGtt > 1:4445149/1‑93 (MQ=255)
aTCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGtt < 2:3577132/93‑1 (MQ=255)
tCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTc < 1:5363330/93‑1 (MQ=255)
tCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTc > 2:305727/1‑93 (MQ=255)
tCGCTGTGTTCATACAAGTTCGCGCCATCAAAGTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTc < 2:2767239/93‑1 (MQ=255)
cGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCa < 1:3304427/93‑1 (MQ=255)
cGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCa < 2:5001113/93‑1 (MQ=255)
cTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGa > 2:1160388/1‑93 (MQ=255)
tgtTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCa < 2:5845508/93‑1 (MQ=255)
ttCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGc < 1:1385594/93‑1 (MQ=255)
tCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCt < 2:878412/93‑1 (MQ=255)
tCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCt < 1:5402802/93‑1 (MQ=255)
cATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTg < 2:4325517/93‑1 (MQ=255)
aTACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGc > 2:5339193/1‑93 (MQ=255)
tACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCg < 2:3239422/93‑1 (MQ=255)
tACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCg > 2:745652/1‑93 (MQ=255)
tACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCg < 2:600347/93‑1 (MQ=255)
tACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGCTCAGACCAGCTGCg > 2:5469561/1‑93 (MQ=255)
aCAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCgt > 2:3778596/1‑93 (MQ=255)
aCAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCgt > 1:4892969/1‑93 (MQ=255)
cAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCgtg < 2:6191850/93‑1 (MQ=255)
cAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCgtg > 2:2532125/1‑93 (MQ=255)
aaGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCgtgt < 1:533910/93‑1 (MQ=255)
aaGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCgtgt > 2:3098118/1‑93 (MQ=255)
aaGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCgtgt > 1:6218676/1‑93 (MQ=255)
aGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGtgtg < 2:2088312/93‑1 (MQ=255)
aGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGtgtg > 1:5948083/1‑93 (MQ=255)
gTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGc < 1:5065135/93‑1 (MQ=255)
gTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGc < 2:2466513/93‑1 (MQ=255)
tCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCgg > 2:5886944/1‑93 (MQ=255)
|
TACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGG > NC_000913/3569986‑3570165
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATC > NC_000913/3569983‑3570169
|
AGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGGTCGCTGTGATCATACAAGTTCGC > SRR4302534.4315592/1‑94 (MQ=60)
AGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGC < SRR4302534.5017124/94‑1 (MQ=60)
AGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGC > SRR4302534.5059161/1‑94 (MQ=60)
AGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGC < SRR4302534.5287314/94‑1 (MQ=60)
TACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCC > SRR4302534.4713537/1‑94 (MQ=60)
TACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCC > SRR4302534.6107191/1‑94 (MQ=60)
TACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCC > SRR4302534.6148617/1‑94 (MQ=60)
ACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCA < SRR4302534.2885418/94‑1 (MQ=60)
CTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCAT > SRR4302534.2377788/1‑94 (MQ=60)
TGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATC < SRR4302534.3529824/94‑1 (MQ=60)
TGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATC < SRR4302534.3755041/94‑1 (MQ=60)
TGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATC > SRR4302534.2508439/1‑94 (MQ=60)
TGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATC < SRR4302534.1267667/94‑1 (MQ=60)
TACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCGAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCA < SRR4302534.696345/94‑1 (MQ=60)
GACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCA > SRR4302534.4280672/1‑94 (MQ=60)
ACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAA > SRR4302534.2651605/1‑94 (MQ=60)
TTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAAT > SRR4302534.3347502/1‑94 (MQ=60)
TCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATT < SRR4302534.2862649/94‑1 (MQ=60)
TCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATT < SRR4302534.3728071/94‑1 (MQ=60)
TCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATT > SRR4302534.1938066/1‑94 (MQ=60)
CACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTC < SRR4302534.2011647/94‑1 (MQ=60)
ACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCG < SRR4302534.1612115/94‑1 (MQ=60)
ACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCG < SRR4302534.6036880/94‑1 (MQ=60)
CGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGG < SRR4302534.1939962/94‑1 (MQ=60)
GGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCACATTCGGC > SRR4302534.3658082/1‑94 (MQ=60)
GCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCA < SRR4302534.690633/94‑1 (MQ=60)
GCGACCATACTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCA > SRR4302534.6473480/1‑94 (MQ=60)
CGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAA > SRR4302534.1516747/1‑94 (MQ=60)
CGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAA > SRR4302534.497409/1‑94 (MQ=60)
GACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAG > SRR4302534.6611925/1‑94 (MQ=60)
GACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAG < SRR4302534.2697110/94‑1 (MQ=60)
GACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAG < SRR4302534.5648017/94‑1 (MQ=60)
ACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGC > SRR4302534.5175628/1‑94 (MQ=60)
CCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCG < SRR4302534.2064996/94‑1 (MQ=60)
CCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCG < SRR4302534.2423935/94‑1 (MQ=60)
CCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCG < SRR4302534.930402/94‑1 (MQ=60)
CCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCG > SRR4302534.4441252/1‑94 (MQ=60)
CATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGC > SRR4302534.4580272/1‑94 (MQ=60)
ATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCA > SRR4302534.86283/1‑94 (MQ=60)
ATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCA > SRR4302534.5809717/1‑94 (MQ=60)
TAGTTGTAGATCAGCGTGTTACAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAA > SRR4302534.6446106/1‑94 (MQ=60)
AGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACTAGTTCGCGCCATCAAATTCGGCAAGCGCAAA > SRR4302534.407139/1‑94 (MQ=60)
TTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGT < SRR4302534.2290174/94‑1 (MQ=60)
TTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGT > SRR4302534.4569284/1‑94 (MQ=60)
GTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCA < SRR4302534.1907218/94‑1 (MQ=60)
GTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCA < SRR4302534.2499977/94‑1 (MQ=60)
GTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCA < SRR4302534.3119890/94‑1 (MQ=60)
TAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCAT > SRR4302534.62584/1‑94 (MQ=60)
TAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCAT > SRR4302534.2411220/1‑94 (MQ=60)
AGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATC < SRR4302534.6289607/94‑1 (MQ=60)
AGATCAGCGTGTTCCAGACCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATC < SRR4302534.1277691/94‑1 (MQ=60)
GATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCA < SRR4302534.425859/94‑1 (MQ=60)
ATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAGGTCATCAG < SRR4302534.2771077/94‑1 (MQ=60)
ATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAG < SRR4302534.843604/94‑1 (MQ=60)
ATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAG < SRR4302534.5562433/94‑1 (MQ=60)
ATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAG < SRR4302534.6274530/94‑1 (MQ=60)
ATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAG < SRR4302534.964982/94‑1 (MQ=60)
TCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGT < SRR4302534.6625623/94‑1 (MQ=60)
CAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTC < SRR4302534.3873069/94‑1 (MQ=60)
AGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCG < SRR4302534.1672092/94‑1 (MQ=60)
AGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCG < SRR4302534.3624285/94‑1 (MQ=60)
GCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGG < SRR4302534.2654524/94‑1 (MQ=60)
GCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGG < SRR4302534.2688224/94‑1 (MQ=60)
GCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGG < SRR4302534.4175467/94‑1 (MQ=60)
CGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGG > SRR4302534.2240697/1‑94 (MQ=60)
GTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGA < SRR4302534.4277376/94‑1 (MQ=60)
TGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAA < SRR4302534.3488990/94‑1 (MQ=60)
TGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAA < SRR4302534.6118073/94‑1 (MQ=60)
TGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAA < SRR4302534.893368/94‑1 (MQ=60)
GTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAG < SRR4302534.490358/94‑1 (MQ=60)
GTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAG < SRR4302534.3734008/94‑1 (MQ=60)
TTCCAGTCCAGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGG > SRR4302534.6466828/1‑94 (MQ=60)
TCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTG < SRR4302534.1289029/94‑1 (MQ=60)
TCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCAGGAAGTG < SRR4302534.1810841/94‑1 (MQ=60)
CCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGG < SRR4302534.1964074/94‑1 (MQ=60)
CCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGG < SRR4302534.732125/94‑1 (MQ=60)
CAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGC < SRR4302534.5314412/94‑1 (MQ=60)
CAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGATCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGC > SRR4302534.4653628/1‑94 (MQ=60)
GTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCT < SRR4302534.629374/94‑1 (MQ=60)
GTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCT < SRR4302534.5547861/94‑1 (MQ=60)
GTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCT < SRR4302534.816612/94‑1 (MQ=60)
GTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCT > SRR4302534.3008250/1‑94 (MQ=60)
TCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTG < SRR4302534.2566157/94‑1 (MQ=60)
CCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGG < SRR4302534.2887786/94‑1 (MQ=60)
CCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGG > SRR4302534.1829591/1‑94 (MQ=60)
CCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGG > SRR4302534.1911876/1‑94 (MQ=60)
CCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGG > SRR4302534.2631348/1‑94 (MQ=60)
CTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGC < SRR4302534.2807934/94‑1 (MQ=60)
CTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGAGGCCTGGC > SRR4302534.3222759/1‑94 (MQ=60)
TGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCA > SRR4302534.274950/1‑94 (MQ=60)
GATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCAC > SRR4302534.5729890/1‑94 (MQ=60)
ATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACC > SRR4302534.2354782/1‑94 (MQ=60)
TGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCC > SRR4302534.661542/1‑94 (MQ=60)
TGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCC < SRR4302534.1754983/94‑1 (MQ=60)
GATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCA < SRR4302534.2447339/94‑1 (MQ=60)
GATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCA < SRR4302534.1407547/94‑1 (MQ=60)
GATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCA < SRR4302534.1339149/94‑1 (MQ=60)
GATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCA < SRR4302534.6298892/94‑1 (MQ=60)
ATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAG < SRR4302534.4406320/94‑1 (MQ=60)
AGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTC < SRR4302534.5757761/94‑1 (MQ=60)
AGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTC < SRR4302534.3706975/94‑1 (MQ=60)
GCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCG > SRR4302534.6498444/1‑94 (MQ=60)
GCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCG < SRR4302534.2557428/94‑1 (MQ=60)
CCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGA < SRR4302534.1574638/94‑1 (MQ=60)
CCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGA < SRR4302534.459275/94‑1 (MQ=60)
CCTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGA < SRR4302534.4119182/94‑1 (MQ=60)
CTTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAG > SRR4302534.677013/1‑94 (MQ=60)
TTCACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGA > SRR4302534.4473923/1‑94 (MQ=60)
TCACGCGGATCTCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAA < SRR4302534.2457663/94‑1 (MQ=60)
CACGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAAT > SRR4302534.6168088/1‑94 (MQ=60)
cgGCGGAGCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATC < SRR4302534.1505559/92‑1 (MQ=60)
CGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCA > SRR4302534.453248/1‑94 (MQ=60)
CGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCA > SRR4302534.3906532/1‑94 (MQ=60)
CGCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCA < SRR4302534.3853510/94‑1 (MQ=60)
GCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGTCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCAC < SRR4302534.2688820/94‑1 (MQ=60)
GCGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATTAC < SRR4302534.4165332/94‑1 (MQ=60)
GCGGATCGCTGTGTTCATACAAGTTCGCGACATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCAC > SRR4302534.5493148/1‑94 (MQ=60)
CGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACG > SRR4302534.3447149/1‑94 (MQ=60)
CGGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACG < SRR4302534.4394394/94‑1 (MQ=60)
GGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGT < SRR4302534.2688872/94‑1 (MQ=60)
GGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGT > SRR4302534.5960332/1‑94 (MQ=60)
GGATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGT > SRR4302534.4233974/1‑94 (MQ=60)
GATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTT > SRR4302534.4565250/1‑94 (MQ=60)
GATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTT < SRR4302534.1442612/94‑1 (MQ=60)
GATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTT > SRR4302534.4895039/1‑94 (MQ=60)
ATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTC < SRR4302534.2552586/94‑1 (MQ=60)
ATCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGCTC < SRR4302534.3437356/94‑1 (MQ=60)
TCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCA < SRR4302534.6240874/94‑1 (MQ=60)
TCGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCA < SRR4302534.5507868/94‑1 (MQ=60)
CGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAG < SRR4302534.3392632/94‑1 (MQ=60)
CGCTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCAT‑AGTCGGGGAGTGGCCTTGCAACCAGTCGAGAATtaacgttaga > SRR4302534.6102484/1‑84 (MQ=60)
CGCTGTGTTCATACAAGGTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGTGAATCACGTTCAG > SRR4302534.5518641/1‑94 (MQ=60)
CTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGAC < SRR4302534.4089454/94‑1 (MQ=60)
CTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGAC < SRR4302534.5085562/94‑1 (MQ=60)
CTGTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGAC > SRR4302534.839000/1‑94 (MQ=60)
GTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCA > SRR4302534.538216/1‑94 (MQ=60)
GTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCA < SRR4302534.3966223/94‑1 (MQ=60)
GTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCA > SRR4302534.3645895/1‑94 (MQ=60)
GTGTTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCA > SRR4302534.355074/1‑94 (MQ=60)
TTCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCT < SRR4302534.1422068/94‑1 (MQ=60)
TCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTG > SRR4302534.6252776/1‑94 (MQ=60)
TCATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTG < SRR4302534.5548213/94‑1 (MQ=60)
CATACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGC < SRR4302534.1547058/94‑1 (MQ=60)
TACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGT > SRR4302534.5025632/1‑94 (MQ=60)
TACAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGT < SRR4302534.94594/94‑1 (MQ=60)
CAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGT > SRR4302534.6476643/1‑94 (MQ=60)
CAAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGT > SRR4302534.6387608/1‑94 (MQ=60)
AAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTG > SRR4302534.6109583/1‑94 (MQ=60)
AAGTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTG < SRR4302534.547164/94‑1 (MQ=60)
GTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCG < SRR4302534.1867538/94‑1 (MQ=60)
GTTCGCGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCG < SRR4302534.5201889/94‑1 (MQ=60)
CGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATC > SRR4302534.1277825/1‑94 (MQ=60)
CGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATC > SRR4302534.4259654/1‑94 (MQ=60)
CGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATC > SRR4302534.5468945/1‑94 (MQ=60)
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AGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATC > NC_000913/3569983‑3570169
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
