Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,624,949 |
C→T |
E724K (GAA→AAA) |
yhiH ← |
putative ATP‑binding component of a transport system, fragment 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,624,949 | 0 | C | T | 100.0%
| 964.0
/ NA
| 245 | E724K (GAA→AAA) | yhiH | putative ATP‑binding component of a transport system, fragment 1 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (116/129); total (116/129) |
Only 100 of 255 total aligned reads displayed.
GCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTA > NC_000913/3624859‑3625038
|
gcgATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGc > 1:2363257/1‑93 (MQ=255)
cgATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGca < 2:4979206/93‑1 (MQ=255)
gATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcac < 1:3803865/93‑1 (MQ=255)
gATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcac > 2:1005519/1‑93 (MQ=255)
gATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcac > 1:4651486/1‑93 (MQ=255)
gATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcac < 2:4880619/93‑1 (MQ=255)
aTGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacc > 1:436541/1‑93 (MQ=255)
aTGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacc < 2:3121449/93‑1 (MQ=255)
aTGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacc < 1:1599599/93‑1 (MQ=255)
tGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacca < 1:1224923/93‑1 (MQ=255)
tGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacca > 2:2780190/1‑93 (MQ=255)
tGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcacca > 2:5077842/1‑93 (MQ=255)
tATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGcaccacc > 2:4937178/1‑92 (MQ=255)
gCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCATGCTaa > 1:524674/1‑93 (MQ=255)
gCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTaa < 1:5393855/93‑1 (MQ=255)
gCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTaa > 2:2260909/1‑93 (MQ=255)
gCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTaa < 2:726305/93‑1 (MQ=255)
cAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAg < 1:2583149/93‑1 (MQ=255)
cAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAg > 2:3937940/1‑93 (MQ=255)
aaCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAgg > 1:308793/1‑93 (MQ=255)
aaCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAgg < 1:3581128/93‑1 (MQ=255)
aCTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAggg < 2:4219960/93‑1 (MQ=255)
cTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGgc < 1:1388879/93‑1 (MQ=255)
gTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGgcgc > 2:5542910/1‑93 (MQ=255)
gTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGccgc > 1:5883279/1‑93 (MQ=255)
tttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCt < 2:1890127/93‑1 (MQ=255)
tttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCt > 2:3715346/1‑93 (MQ=255)
ttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCtt > 1:291861/1‑93 (MQ=255)
ttACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCtt < 2:5363175/93‑1 (MQ=255)
taacAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTa < 1:203342/90‑1 (MQ=255)
tACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTa > 2:848724/1‑93 (MQ=255)
aCCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAg > 1:4145750/1‑93 (MQ=255)
ccAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGc < 2:4431414/93‑1 (MQ=255)
ccAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGc < 2:6426597/93‑1 (MQ=255)
cAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCa < 1:3394226/93‑1 (MQ=255)
cAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCa < 2:1996577/93‑1 (MQ=255)
aGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCAtt < 1:3377323/93‑1 (MQ=255)
gCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTg > 1:1141442/1‑93 (MQ=255)
cAAAAATTCGCTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGa < 1:4232869/93‑1 (MQ=255)
aaaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAc > 1:6465061/1‑93 (MQ=255)
aaaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAc < 2:43165/93‑1 (MQ=255)
aaaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACg > 1:633388/1‑93 (MQ=255)
aaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACgg < 2:789768/93‑1 (MQ=255)
aaaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACgg < 2:332855/93‑1 (MQ=255)
aaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACggg > 2:3518972/1‑93 (MQ=255)
aaTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACggg < 2:2538448/93‑1 (MQ=255)
aTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGa < 2:6053763/93‑1 (MQ=255)
aTTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGa < 2:1120078/93‑1 (MQ=255)
tCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTCACGGGatc > 1:2572792/1‑93 (MQ=255)
cACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatca < 1:6045403/93‑1 (MQ=255)
aCTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatcat > 1:1062576/1‑93 (MQ=255)
aCTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatcat > 1:5311866/1‑93 (MQ=255)
tACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGatcatca < 2:5718613/93‑1 (MQ=255)
gcgTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGAtcatcatca < 2:3841925/93‑1 (MQ=255)
tggtggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATcagca > 2:5856011/1‑93 (MQ=255)
ggtggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATcagcag > 1:1456394/1‑93 (MQ=255)
ggtggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATcagcag < 2:2727682/93‑1 (MQ=255)
gtggGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGa > 2:1507527/1‑93 (MQ=255)
gggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAg < 2:4521261/93‑1 (MQ=255)
gggggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAg > 2:3963850/1‑93 (MQ=255)
gggTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCg < 2:2686069/93‑1 (MQ=255)
gggTCACGTAAAGGTTGATAATCGACCCAAGCTATTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCg > 2:6303667/1‑93 (MQ=255)
gTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCggg > 2:5285595/1‑93 (MQ=255)
tCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGa < 2:3468730/93‑1 (MQ=255)
cACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGAt > 1:6454947/1‑93 (MQ=255)
cACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGAt > 1:39995/1‑93 (MQ=255)
aCGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATc < 1:2248574/93‑1 (MQ=255)
gTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAc > 1:1006815/1‑93 (MQ=255)
gTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAc < 1:2754069/93‑1 (MQ=255)
gTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAc > 2:2551494/1‑93 (MQ=255)
tAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAcc < 1:2809324/93‑1 (MQ=255)
aaaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccg > 1:488261/1‑93 (MQ=255)
aaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgc > 2:3731950/1‑93 (MQ=255)
aaGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgc > 1:2415283/1‑93 (MQ=255)
aGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgcc < 1:5793785/93‑1 (MQ=255)
ggTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgccg < 2:4164918/93‑1 (MQ=255)
ggTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAccgccg > 1:2497502/1‑93 (MQ=255)
gTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCgg < 1:2229304/93‑1 (MQ=255)
tGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGaa < 1:6118713/93‑1 (MQ=255)
tAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACaa < 1:4462249/93‑1 (MQ=255)
aaTCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAAt < 2:4758087/93‑1 (MQ=255)
aaTCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAAt > 1:5031359/1‑93 (MQ=255)
aTCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATc < 1:867575/93‑1 (MQ=255)
cGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGc < 1:5470139/93‑1 (MQ=255)
cGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGc < 1:5855150/93‑1 (MQ=255)
cGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATAACCGCCGGAACAATCGc > 2:1854335/1‑93 (MQ=255)
aCCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTg < 1:152280/93‑1 (MQ=255)
aCCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTg > 1:5928792/1‑93 (MQ=255)
aCCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTg < 2:2115754/93‑1 (MQ=255)
cccAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCttg > 1:5341876/1‑91 (MQ=255)
cAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCa > 1:4522273/1‑93 (MQ=255)
aaGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAg < 2:6162553/93‑1 (MQ=255)
aaGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAg < 1:3465621/93‑1 (MQ=255)
ctctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCt < 1:2736580/93‑1 (MQ=255)
tctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCtt < 2:4714949/93‑1 (MQ=255)
ctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCttt > 1:4742789/1‑93 (MQ=255)
ctTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCttt > 2:3863508/1‑93 (MQ=255)
ttttttCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCtttt < 1:1727196/93‑1 (MQ=255)
ttttttCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTCGCAGGCtttt > 2:154538/1‑93 (MQ=255)
ttttTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCttttt > 2:1219566/1‑93 (MQ=255)
|
GCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTA > NC_000913/3624859‑3625038
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTC > NC_000913/3624856‑3625042
|
CCAGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTT < SRR4302534.6425945/94‑1 (MQ=60)
CAGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTC > SRR4302534.6513948/1‑94 (MQ=60)
CAGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTC < SRR4302534.331804/94‑1 (MQ=60)
CAGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTC > SRR4302534.5425226/1‑94 (MQ=60)
AGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCC < SRR4302534.6632107/94‑1 (MQ=60)
AGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCC > SRR4302534.4169872/1‑94 (MQ=60)
AGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCC > SRR4302534.6011126/1‑94 (MQ=60)
GCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCG < SRR4302534.1195881/94‑1 (MQ=60)
CGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGC > SRR4302534.2425988/1‑94 (MQ=60)
CGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCAC > SRR4302534.4889526/1‑94 (MQ=60)
CGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCAC < SRR4302534.4853993/94‑1 (MQ=60)
CGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCAC > SRR4302534.4777768/1‑94 (MQ=60)
CGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCAC > SRR4302534.2856211/1‑94 (MQ=60)
GATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACC < SRR4302534.3906006/94‑1 (MQ=60)
GATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACC > SRR4302534.447661/1‑94 (MQ=60)
ATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCA < SRR4302534.5443863/94‑1 (MQ=60)
ATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCA < SRR4302534.1641390/94‑1 (MQ=60)
TGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCAC < SRR4302534.1257174/94‑1 (MQ=60)
ATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCT > SRR4302534.4603935/1‑94 (MQ=60)
GGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCATGCTAA > SRR4302534.537715/1‑94 (MQ=60)
GCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAG < SRR4302534.5539087/94‑1 (MQ=60)
CAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGG > SRR4302534.316770/1‑94 (MQ=60)
CAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGG < SRR4302534.2651534/94‑1 (MQ=60)
AACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGG < SRR4302534.3677450/94‑1 (MQ=60)
AACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGG < SRR4302534.2292273/94‑1 (MQ=60)
CTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCG < SRR4302534.3729026/94‑1 (MQ=60)
CTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCG < SRR4302534.1425430/94‑1 (MQ=60)
CTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCG > SRR4302534.1156786/1‑94 (MQ=60)
TGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGC > SRR4302534.3996439/1‑94 (MQ=60)
TGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGCCGC > SRR4302534.6043027/1‑94 (MQ=60)
TTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTT < SRR4302534.6635103/94‑1 (MQ=60)
TTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTT > SRR4302534.299405/1‑94 (MQ=60)
TTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTT < SRR4302534.6108099/94‑1 (MQ=60)
TTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTT < SRR4302534.6514789/94‑1 (MQ=60)
TTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTA > SRR4302534.2477084/1‑94 (MQ=60)
TTACCAAGCAAAAATTCACTACGCGTGGTGGGGTTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTA > SRR4302534.4483600/1‑94 (MQ=60)
TTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTA > SRR4302534.5167645/1‑94 (MQ=60)
TACTAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAG < SRR4302534.1621335/94‑1 (MQ=60)
TACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAG > SRR4302534.4257646/1‑94 (MQ=60)
TACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAG < SRR4302534.4999555/94‑1 (MQ=60)
TAACAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAG < SRR4302534.208679/94‑1 (MQ=60)
ACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGC > SRR4302534.2813065/1‑94 (MQ=60)
CCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCA > SRR4302534.6635750/1‑94 (MQ=60)
CCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCA > SRR4302534.2479072/1‑94 (MQ=60)
CAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCAT < SRR4302534.3485291/94‑1 (MQ=60)
AAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATT > SRR4302534.2969852/1‑94 (MQ=60)
AAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATT < SRR4302534.926005/94‑1 (MQ=60)
AGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTG < SRR4302534.3467852/94‑1 (MQ=60)
AGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTG > SRR4302534.1171328/1‑94 (MQ=60)
CAAAAATTCGCTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAC < SRR4302534.4346955/94‑1 (MQ=60)
CAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAC < SRR4302534.6105557/94‑1 (MQ=60)
CAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAC < SRR4302534.5698242/94‑1 (MQ=60)
CAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGAC > SRR4302534.6639195/1‑94 (MQ=60)
AAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACG > SRR4302534.648757/1‑94 (MQ=60)
AATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTTCGCACCACGCTTAGGGCGCTTTGCATTGACGcgt > SRR4302534.4170010/1‑91 (MQ=60)
AATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGA > SRR4302534.2642764/1‑94 (MQ=60)
AATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGA > SRR4302534.6220516/1‑94 (MQ=60)
TTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTCACGGGATC > SRR4302534.2640962/1‑94 (MQ=60)
CACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCAT > SRR4302534.5455180/1‑94 (MQ=60)
CACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCAT > SRR4302534.1090117/1‑94 (MQ=60)
CACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCAT < SRR4302534.6209736/94‑1 (MQ=60)
CACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCAT < SRR4302534.547251/94‑1 (MQ=60)
ACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATC < SRR4302534.257108/94‑1 (MQ=60)
CTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCA < SRR4302534.4345111/94‑1 (MQ=60)
ACGCGTGGTGGGGGTCACGTATAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATC > SRR4302534.3680866/1‑94 (MQ=60)
ACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATC < SRR4302534.5531379/94‑1 (MQ=60)
CGCGTGGTGGTGGTCACGTAAAGGTTGAGAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCA < SRR4302534.2805314/94‑1 (MQ=60)
CGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCA > SRR4302534.5807127/1‑94 (MQ=60)
GCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATAAG > SRR4302534.1428344/1‑94 (MQ=60)
TGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAG > SRR4302534.108370/1‑94 (MQ=60)
TGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAG > SRR4302534.1494709/1‑94 (MQ=60)
GGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGA > SRR4302534.1769193/1‑94 (MQ=60)
GTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAA > SRR4302534.3506109/1‑94 (MQ=60)
GGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGC < SRR4302534.3172265/94‑1 (MQ=60)
GGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGG < SRR4302534.5460269/94‑1 (MQ=60)
GGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGG > SRR4302534.838838/1‑94 (MQ=60)
TCACGTAAATGTTGATAATCTACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGAT > SRR4302534.6433212/1‑94 (MQ=60)
TCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGAT < SRR4302534.267674/94‑1 (MQ=60)
TCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGAT > SRR4302534.41064/1‑94 (MQ=60)
TCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGAT > SRR4302534.6628873/1‑94 (MQ=60)
ACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCA < SRR4302534.2308173/94‑1 (MQ=60)
CGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAC > SRR4302534.4428678/1‑94 (MQ=60)
CGTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCAC > SRR4302534.1032646/1‑94 (MQ=60)
GTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACC < SRR4302534.2826612/94‑1 (MQ=60)
GTAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACC < SRR4302534.6087455/94‑1 (MQ=60)
TAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCG < SRR4302534.2883193/94‑1 (MQ=60)
TAAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCG > SRR4302534.500471/1‑94 (MQ=60)
AAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGC < SRR4302534.512544/94‑1 (MQ=60)
AAAGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGC > SRR4302534.2479521/1‑94 (MQ=60)
TGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCG > SRR4302534.2563830/1‑94 (MQ=60)
AGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCG > SRR4302534.2334901/1‑94 (MQ=60)
AGGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCG < SRR4302534.5950996/94‑1 (MQ=60)
GGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGG < SRR4302534.2010196/94‑1 (MQ=60)
GGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGG > SRR4302534.3473886/1‑94 (MQ=60)
GGTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGG < SRR4302534.4658067/94‑1 (MQ=60)
GTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGA < SRR4302534.6449890/94‑1 (MQ=60)
GTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGA < SRR4302534.2288356/94‑1 (MQ=60)
GTTGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGA > SRR4302534.4562851/1‑94 (MQ=60)
TGATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAAC < SRR4302534.6285151/94‑1 (MQ=60)
GATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACA < SRR4302534.60340/94‑1 (MQ=60)
GATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACA < SRR4302534.3429515/94‑1 (MQ=60)
ATAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAA > SRR4302534.834117/1‑94 (MQ=60)
TAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAAT > SRR4302534.5167263/1‑94 (MQ=60)
TAATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAAT < SRR4302534.4582895/94‑1 (MQ=60)
AATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATC > SRR4302534.6042553/1‑94 (MQ=60)
AATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATC < SRR4302534.3594901/94‑1 (MQ=60)
AATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATC < SRR4302534.2985708/94‑1 (MQ=60)
ATCGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCG < SRR4302534.889480/94‑1 (MQ=60)
CGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCT < SRR4302534.6014120/94‑1 (MQ=60)
CGACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCT < SRR4302534.5617600/94‑1 (MQ=60)
GACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTG > SRR4302534.6089797/1‑94 (MQ=60)
ACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTTG > SRR4302534.5485894/1‑94 (MQ=60)
ACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGG > SRR4302534.1546041/1‑94 (MQ=60)
ACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGG < SRR4302534.156245/94‑1 (MQ=60)
ACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGG < SRR4302534.2302821/94‑1 (MQ=60)
ACCCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGG > SRR4302534.2833973/1‑94 (MQ=60)
CCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCA > SRR4302534.4736832/1‑94 (MQ=60)
CCAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCA > SRR4302534.4644779/1‑94 (MQ=60)
CAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAG < SRR4302534.2263677/94‑1 (MQ=60)
CAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAG > SRR4302534.1534261/1‑94 (MQ=60)
CAAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAG < SRR4302534.2488640/94‑1 (MQ=60)
AAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGG > SRR4302534.5538987/1‑94 (MQ=60)
AAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGG < SRR4302534.1302116/94‑1 (MQ=60)
AAGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGG < SRR4302534.3558787/94‑1 (MQ=60)
AGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGC > SRR4302534.171264/1‑94 (MQ=60)
AGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGC < SRR4302534.2606323/94‑1 (MQ=60)
AGCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGC > SRR4302534.3496669/1‑94 (MQ=60)
GCTCTTTTTTCCGCACCACGCTAAGGGCTCTTAGCATTGACGGGATCATCATCAGCAGAGGCGGGATCACCGCCGGAACAATCGCTGGCAGGCT < SRR4302534.4464262/94‑1 (MQ=60)
GCTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCT > SRR4302534.5211926/1‑94 (MQ=60)
CTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTT < SRR4302534.2808711/94‑1 (MQ=60)
CTCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTT < SRR4302534.3058785/94‑1 (MQ=60)
TCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTT < SRR4302534.1358207/94‑1 (MQ=60)
TCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTT > SRR4302534.1104594/1‑94 (MQ=60)
TCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTT > SRR4302534.4871539/1‑94 (MQ=60)
TCTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTT < SRR4302534.2271923/94‑1 (MQ=60)
CTTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTT < SRR4302534.5542127/94‑1 (MQ=60)
TTTTTTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTT < SRR4302534.1772044/94‑1 (MQ=60)
TTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGT < SRR4302534.975531/94‑1 (MQ=60)
TTCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGT < SRR4302534.3014387/94‑1 (MQ=60)
TCCGCGCCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTC < SRR4302534.5801745/94‑1 (MQ=60)
TCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATGATAATCACCAGAAGCGGGATCACCGCCGGAACCATCGCTGGCAGGCTTTTTACATC > SRR4302534.3406093/1‑94 (MQ=60)
TCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTC > SRR4302534.4729827/1‑94 (MQ=60)
TCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTC < SRR4302534.4043410/94‑1 (MQ=60)
TCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTC > SRR4302534.2267727/1‑94 (MQ=60)
|
CCAGCGCGATGTATGGCAACTGTTTACCAAGCAAAAATTCACTACGCGTGGTGGGGGTCACGTAAAGGTTGATAATCGACCCAAGCTCTTTTTCCCGCACCACGCTAAGGGCGCTTAGCATTGACGGGATCATCATCAGCAGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTC > NC_000913/3624856‑3625042
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
