Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,765,234 |
G→A |
G129G (GGG→GGA) |
yibJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,765,234 | 0 | G | A | 100.0%
| 466.0
/ NA
| 123 | G129G (GGG→GGA) | yibJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (52/71); total (52/71) |
Only 100 of 125 total aligned reads displayed.
CTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCC > NC_000913/3765186‑3765323
|
cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGt > 1:4713576/1‑93 (MQ=255)
cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGt > 2:2444455/1‑93 (MQ=255)
tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTc > 2:1606822/1‑93 (MQ=255)
attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa > 2:21893/1‑93 (MQ=255)
attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa > 2:5441720/1‑93 (MQ=255)
attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa < 1:4418434/93‑1 (MQ=255)
tatGACCCGCTGCTGGTGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATa < 2:2992376/93‑1 (MQ=255)
tatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATa > 2:772473/1‑93 (MQ=255)
atGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaa > 1:3422465/1‑93 (MQ=255)
tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaaa > 1:3931728/1‑93 (MQ=255)
gACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAt < 2:5995846/93‑1 (MQ=255)
aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATg < 2:2382645/93‑1 (MQ=255)
cccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGt > 2:6093370/1‑93 (MQ=255)
ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa > 2:3523094/1‑93 (MQ=255)
ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa > 1:1510474/1‑93 (MQ=255)
ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa > 1:3804711/1‑93 (MQ=255)
cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg < 1:5909605/93‑1 (MQ=255)
cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg < 2:4382709/93‑1 (MQ=255)
cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg < 2:2118950/93‑1 (MQ=255)
gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa < 2:3684032/93‑1 (MQ=255)
ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt > 1:2203480/1‑93 (MQ=255)
ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt < 1:3149281/93‑1 (MQ=255)
tGCTGGGGCGGTATATCACTCAGTATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc < 2:2876169/93‑1 (MQ=255)
tGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc > 2:122417/1‑93 (MQ=255)
gctggggCGGTATATCACTCAGGATCCTATTGGACTGAAGGGGGGATGTAATTTTTATCAGTAGCCGTTGAATCCGGTCATAAATGTAGATcc < 1:313/90‑1 (MQ=17)
gctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc > 2:6049362/4‑93 (MQ=255)
gctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc < 2:4974431/90‑1 (MQ=255)
gtggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCg < 1:3417138/91‑1 (MQ=255)
ctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCg > 1:980645/3‑93 (MQ=255)
ctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCg < 1:2282952/91‑1 (MQ=255)
tggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGc < 2:586538/92‑1 (MQ=255)
tggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGc < 2:1001310/92‑1 (MQ=255)
ggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCa > 2:1008484/1‑93 (MQ=255)
ggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCa > 2:3091699/1‑93 (MQ=255)
ggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCa > 1:4512013/1‑93 (MQ=255)
ggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCa > 1:2794202/1‑93 (MQ=255)
ggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCa > 1:1027105/1‑93 (MQ=255)
gggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCaa > 1:932975/1‑93 (MQ=255)
gggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCaa < 1:1455960/93‑1 (MQ=255)
gggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCaa > 2:224243/1‑93 (MQ=255)
ggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAg < 2:5932183/93‑1 (MQ=255)
ggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAg < 2:3620031/93‑1 (MQ=255)
ggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAg < 1:4000310/93‑1 (MQ=255)
cGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGt > 1:3153781/1‑93 (MQ=255)
ggTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGtt < 2:3360053/93‑1 (MQ=255)
ggTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGtt < 2:6004230/93‑1 (MQ=255)
ggTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGtt < 2:3705299/93‑1 (MQ=255)
ggTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGtt > 2:397732/1‑93 (MQ=255)
gTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGttt < 1:5129061/93‑1 (MQ=255)
gTATATCACGCAGCATCCGATTGGACTGAGGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGttt < 1:1688937/93‑1 (MQ=18)
tataTCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTg < 2:5120579/93‑1 (MQ=255)
tataTCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTg > 1:72328/1‑93 (MQ=255)
tataTCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTg < 1:541428/93‑1 (MQ=255)
atatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTgg < 2:5505996/93‑1 (MQ=255)
tatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGt < 1:806987/93‑1 (MQ=255)
tatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGt < 1:2775009/93‑1 (MQ=255)
tatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGt < 1:6121205/93‑1 (MQ=255)
tatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGt > 2:3428050/1‑93 (MQ=255)
atCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGtt < 1:1164088/93‑1 (MQ=255)
atCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGtt < 2:5476930/93‑1 (MQ=255)
atCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGtt < 2:5476931/93‑1 (MQ=255)
atCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGtt < 1:4944896/93‑1 (MQ=255)
atCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGtt < 1:3719474/93‑1 (MQ=255)
tCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTg < 2:4284186/93‑1 (MQ=255)
tCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTg < 2:1295824/93‑1 (MQ=255)
tCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTg < 2:2781804/93‑1 (MQ=255)
tCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTg > 2:3364984/1‑93 (MQ=255)
tCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTg > 2:3303852/1‑93 (MQ=255)
cACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGa < 2:675811/93‑1 (MQ=255)
aCTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGat < 1:3429183/93‑1 (MQ=255)
aCTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGat < 2:1028836/93‑1 (MQ=255)
aCTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGat < 1:87734/93‑1 (MQ=255)
aCTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGat < 1:1357571/93‑1 (MQ=255)
cTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGata > 2:2134814/1‑93 (MQ=255)
tCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGatat < 1:6142507/93‑1 (MQ=255)
cAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGAtata > 1:1293164/1‑93 (MQ=255)
ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa > 1:3473127/1‑93 (MQ=255)
ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa < 2:4033818/93‑1 (MQ=255)
ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa > 1:2803748/1‑93 (MQ=255)
ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa > 2:5024638/1‑93 (MQ=255)
ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGGTTGGTTGATATaaa > 1:3875521/1‑93 (MQ=255)
gATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAt > 1:5132851/1‑93 (MQ=255)
aTCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAtt < 1:4828834/93‑1 (MQ=255)
tCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAttt < 1:3827018/93‑1 (MQ=255)
ccGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTta < 1:181574/93‑1 (MQ=255)
ccGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTta < 1:2140716/93‑1 (MQ=255)
cGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtat < 1:1986626/93‑1 (MQ=255)
cGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtat > 1:6162133/1‑93 (MQ=255)
cGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtat > 2:2353372/1‑93 (MQ=255)
gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata > 2:1742601/1‑93 (MQ=255)
gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata > 1:3077486/1‑93 (MQ=255)
gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata > 2:3008609/1‑93 (MQ=255)
gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata < 1:6332727/93‑1 (MQ=255)
aTTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAc < 2:4793505/93‑1 (MQ=255)
aTTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAc < 1:3909746/93‑1 (MQ=255)
ttGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAcc > 1:521623/1‑93 (MQ=255)
ttGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAcc > 1:5924997/1‑93 (MQ=255)
ttGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAAACCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAcc > 1:5924080/1‑93 (MQ=255)
tGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAccc > 1:3310998/1‑93 (MQ=255)
tGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAccc < 1:1512974/93‑1 (MQ=255)
|
CTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCC > NC_000913/3765186‑3765323
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAA > NC_000913/3765141‑3765327
|
GCAGCATTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGG < SRR4302534.1257908/94‑1 (MQ=0)
CAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGC < SRR4302534.2144087/94‑1 (MQ=0)
CAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGC > SRR4302534.4920834/1‑94 (MQ=0)
AGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACT > SRR4302534.3486318/1‑94 (MQ=0)
AGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACT < SRR4302534.1705851/94‑1 (MQ=0)
GCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTG < SRR4302534.5227726/94‑1 (MQ=0)
AGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAA < SRR4302534.662461/94‑1 (MQ=0)
TATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGG < SRR4302534.3584264/94‑1 (MQ=0)
TGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGG < SRR4302534.1161663/94‑1 (MQ=0)
GATGAGGAGTCAGGCCGGTAGTACAACCGCCACCGCTATTATGACCCGCTGCGGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGAGGG < SRR4302534.5373609/94‑1 (MQ=0)
ATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGG > SRR4302534.4872335/1‑94 (MQ=0)
ATGAGGAGTCCGGCCTGTATTACAACCCCCACCGCTATTATGACCCGCTGCTGGGGCGGTAGATCACTCAGGATCCGATTGGACTGAAGGGGGG < SRR4302534.296283/94‑1 (MQ=0)
GAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGAT > SRR4302534.262380/1‑94 (MQ=0)
GAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGAT > SRR4302534.3791625/1‑94 (MQ=0)
GGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATG < SRR4302534.5026488/94‑1 (MQ=0)
AGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATG < SRR4302534.6504754/94‑1 (MQ=0)
AGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATG < SRR4302534.234876/94‑1 (MQ=0)
AGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATG > SRR4302534.3694877/1‑94 (MQ=0)
AGGAGCCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGGATATCACTCAGGATCCGATTGGGCTGAAGGGCGGATG > SRR4302534.4415652/1‑94 (MQ=0)
GGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGG < SRR4302534.4786762/94‑1 (MQ=0)
GAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGA < SRR4302534.6233855/94‑1 (MQ=0)
AGTCCGGCCTGTATTACAGCCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAA < SRR4302534.1053006/94‑1 (MQ=0)
GTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAAT > SRR4302534.1193275/1‑94 (MQ=0)
CGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTT > SRR4302534.1894046/1‑94 (MQ=0)
CCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTAT > SRR4302534.2903758/1‑94 (MQ=0)
TGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCA > SRR4302534.4977822/1‑94 (MQ=0)
TATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGT > SRR4302534.5257486/1‑94 (MQ=0)
ATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTA < SRR4302534.3520593/94‑1 (MQ=0)
TACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATC < SRR4302534.2486132/94‑1 (MQ=0)
ACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCC < SRR4302534.5113383/94‑1 (MQ=0)
CAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCG < SRR4302534.5751987/94‑1 (MQ=0)
CAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCG < SRR4302534.5884959/94‑1 (MQ=0)
ACCCGCCTCCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGACCCGATTGGGCTGAAGGGGGGATGGAATTTTTGTCAGTATCCGT < SRR4302534.3649987/94‑1 (MQ=0)
AACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGT < SRR4302534.6171791/94‑1 (MQ=0)
CCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTA > SRR4302534.1454023/1‑94 (MQ=0)
CGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGGTGGAATTTTTATCAGTATCCGTTGA > SRR4302534.1174397/1‑94 (MQ=0)
GCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAA < SRR4302534.4430374/94‑1 (MQ=0)
GCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAA > SRR4302534.4673949/1‑94 (MQ=0)
CCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAAT > SRR4302534.883727/1‑94 (MQ=0)
CACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC > SRR4302534.4313136/1‑94 (MQ=0)
CACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC > SRR4302534.5524644/1‑94 (MQ=0)
CACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC > SRR4302534.5523953/1‑94 (MQ=0)
CACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATC > SRR4302534.1820687/1‑94 (MQ=0)
cacgtttTTATGACCCGCTGCTGGGGCGCTATATCACTCAGTATCAGATTGGACTGAAGGGGGGATGGAATTTTTATCATTATCCGTTGAATCC < SRR4302534.3870895/87‑1 (MQ=0)
ACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCC < SRR4302534.4238782/94‑1 (MQ=0)
GCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGT > SRR4302534.4841581/1‑94 (MQ=4)
TATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCA < SRR4302534.6595954/94‑1 (MQ=9)
ATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAT < SRR4302534.4537718/94‑1 (MQ=11)
TTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATA < SRR4302534.981099/94‑1 (MQ=14)
TATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAA > SRR4302534.3514425/1‑94 (MQ=19)
ATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAA > SRR4302534.4037044/1‑94 (MQ=22)
CCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTA > SRR4302534.1550187/1‑94 (MQ=31)
CCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTA > SRR4302534.3906870/1‑94 (MQ=31)
CCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAG < SRR4302534.5421777/94‑1 (MQ=34)
CGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGA < SRR4302534.6070070/94‑1 (MQ=36)
GCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAT > SRR4302534.2261786/1‑94 (MQ=39)
CTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC < SRR4302534.3232140/94‑1 (MQ=41)
cgctGGGGCGGTGTATCACTCAGGATCCGATTGGACTGAAGGGGGGATGAAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC < SRR4302534.5270186/90‑1 (MQ=42)
TGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC < SRR4302534.3522494/94‑1 (MQ=44)
GCTGGGGCGGTATATCACTCAGGATCCTATTGGACTGAAGGGGGGATGTAATTTTTATCAGTAGCCGTTGAATCCGGTCATAAATGTAGATCCG < SRR4302534.320/94‑1 (MQ=41)
GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG > SRR4302534.1005668/1‑94 (MQ=47)
gtGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGC < SRR4302534.3508940/92‑1 (MQ=51)
CTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGC < SRR4302534.2343534/94‑1 (MQ=49)
TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA > SRR4302534.2867695/1‑94 (MQ=52)
TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA > SRR4302534.4634217/1‑94 (MQ=52)
TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA > SRR4302534.1053559/1‑94 (MQ=52)
GGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAA > SRR4302534.4256262/1‑94 (MQ=55)
GGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAA > SRR4302534.956709/1‑94 (MQ=55)
GGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAG < SRR4302534.1494268/94‑1 (MQ=58)
GGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGG < SRR4302534.4107393/94‑1 (MQ=60)
GCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGT > SRR4302534.3236831/1‑94 (MQ=60)
GCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGT < SRR4302534.4967879/94‑1 (MQ=60)
CGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTT < SRR4302534.3097921/94‑1 (MQ=60)
GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT < SRR4302534.1468883/94‑1 (MQ=60)
GTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTG < SRR4302534.5267535/94‑1 (MQ=60)
GTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTG > SRR4302534.74304/1‑94 (MQ=60)
GTATATCACGCAGCATCCGATTGGACTGAGGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTG < SRR4302534.1732848/94‑1 (MQ=60)
TATATCATTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG < SRR4302534.3942055/94‑1 (MQ=60)
TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG < SRR4302534.3296322/94‑1 (MQ=60)
TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG < SRR4302534.554826/94‑1 (MQ=60)
TATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTT < SRR4302534.827266/94‑1 (MQ=60)
TATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTT < SRR4302534.6287700/94‑1 (MQ=60)
TATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTT < SRR4302534.2848027/94‑1 (MQ=60)
ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCTGTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG < SRR4302534.1831653/94‑1 (MQ=60)
ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG < SRR4302534.5078875/94‑1 (MQ=60)
ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG < SRR4302534.3819458/94‑1 (MQ=60)
ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG < SRR4302534.1194645/94‑1 (MQ=60)
ACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATA < SRR4302534.1393340/94‑1 (MQ=60)
ACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATA < SRR4302534.90077/94‑1 (MQ=60)
ACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATA < SRR4302534.3521311/94‑1 (MQ=60)
TCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATA > SRR4302534.1327223/1‑94 (MQ=60)
TCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATA < SRR4302534.6309570/94‑1 (MQ=60)
AGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAA > SRR4302534.3566481/1‑94 (MQ=60)
AGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAA > SRR4302534.2877500/1‑94 (MQ=60)
AGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGGTTGGTTGATATAAA > SRR4302534.3979569/1‑94 (MQ=60)
GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT > SRR4302534.5271419/1‑94 (MQ=60)
GATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATT > SRR4302534.2331401/1‑94 (MQ=60)
ATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTT < SRR4302534.4959860/94‑1 (MQ=60)
TCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTA < SRR4302534.3929818/94‑1 (MQ=60)
CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT < SRR4302534.186349/94‑1 (MQ=60)
CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT < SRR4302534.2197162/94‑1 (MQ=60)
CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT > SRR4302534.6329742/1‑94 (MQ=60)
CGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATA > SRR4302534.6141644/1‑94 (MQ=60)
CGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATA < SRR4302534.2038646/94‑1 (MQ=60)
CGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATA > SRR4302534.3158331/1‑94 (MQ=60)
GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC < SRR4302534.6503811/94‑1 (MQ=60)
ATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACC > SRR4302534.534591/1‑94 (MQ=60)
ATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACC > SRR4302534.6085877/1‑94 (MQ=60)
ATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACC < SRR4302534.4014582/94‑1 (MQ=60)
ATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAAACCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACC > SRR4302534.6084936/1‑94 (MQ=60)
TTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCC > SRR4302534.3399427/1‑94 (MQ=60)
TGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCC > SRR4302534.1205488/1‑94 (MQ=60)
TGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCC < SRR4302534.1552750/94‑1 (MQ=60)
GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAGTCCGGTCATAAATGTAGATCCGCAAGGTTTGGATGATATAAATTTATACCCCG < SRR4302534.6481865/94‑1 (MQ=60)
GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCA > SRR4302534.6617641/1‑94 (MQ=60)
GACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGA < SRR4302534.5134032/94‑1 (MQ=60)
GACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGA < SRR4302534.5481524/94‑1 (MQ=60)
ACTGAAGGGTGGATGGAATTTTTATCAGTATCCGTTGAAGCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAA < SRR4302534.3267715/94‑1 (MQ=60)
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GCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAA > NC_000913/3765141‑3765327
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
