Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,870,876 |
Δ1 bp |
coding (365/1764 nt) |
dgoA ← |
2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,870,875 | 0 | G | . | 100.0%
| 1176.6
/ NA
| 250 | coding (366/1764 nt) | dgoA | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (137/113); total (137/113) |
Only 100 of 281 total aligned reads displayed.
AAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA > NC_000913/3870784‑3870963
|
aaaGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGTCGGAAATATTTTCAGCGCCTgcgc < 1:6224899/93‑2 (MQ=255)
aaaGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgc > 1:5694811/1‑92 (MQ=255)
aaaGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgc > 1:5801614/1‑92 (MQ=255)
aaaGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgc < 2:5112708/93‑2 (MQ=255)
aaGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgcg > 1:5189290/1‑91 (MQ=255)
aaGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgcg > 2:2421063/1‑91 (MQ=255)
aaGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgcg > 1:2566720/1‑91 (MQ=255)
aaGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgcg > 1:2425951/1‑91 (MQ=255)
gACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgcgcc > 2:4684182/1‑89 (MQ=255)
gACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgcgcc > 1:1479512/1‑89 (MQ=255)
gACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTgcgcgcc > 2:3707507/1‑89 (MQ=255)
aCTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGccc < 2:4356453/93‑1 (MQ=255)
cTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCg > 2:6357349/1‑93 (MQ=255)
tGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGc > 1:6318332/1‑93 (MQ=255)
gCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCt < 1:1618508/93‑1 (MQ=255)
gCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCACCTGC‑GCGCCCGCt > 2:3858404/1‑93 (MQ=255)
cGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCtt < 2:3275375/93‑1 (MQ=255)
cGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCtt < 1:3913443/93‑1 (MQ=255)
aTGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCg > 1:4688284/1‑93 (MQ=255)
gTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAg > 2:2737567/1‑93 (MQ=255)
gTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACAAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAg < 1:3425694/93‑1 (MQ=255)
tCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgc < 2:1713092/93‑1 (MQ=255)
ccGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgcg < 2:227515/93‑1 (MQ=255)
ccGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgcg > 1:3181377/1‑93 (MQ=255)
ccGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAgcg > 2:1565656/1‑93 (MQ=255)
ccGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GAGCCCGCTTCCAgcg > 1:1019501/1‑93 (MQ=255)
aTGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGACGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCgg > 2:4173759/1‑93 (MQ=255)
tGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGt < 1:6367782/93‑1 (MQ=255)
tGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGt < 1:4944376/93‑1 (MQ=255)
cAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTaaa > 1:782600/1‑93 (MQ=255)
aaTACCTCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAg < 1:141318/93‑1 (MQ=255)
aTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAgg > 1:3315369/1‑93 (MQ=255)
aTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAgg > 2:4376791/1‑93 (MQ=255)
tACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGc < 2:5975724/93‑1 (MQ=255)
aCCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCt > 2:910522/1‑93 (MQ=255)
aCCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCt < 1:3065161/93‑1 (MQ=255)
cGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTc < 1:5117304/93‑1 (MQ=255)
cGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTc < 1:647330/93‑1 (MQ=255)
ttttAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCACGCTTCGAGCGCGGTAAAGGCTTCGGt < 2:1876680/93‑1 (MQ=255)
ttttAACGCTTTGATGTATCGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGt > 1:6289744/1‑93 (MQ=255)
tttAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTc < 1:3271350/93‑1 (MQ=255)
tatAACGCCTTTATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTc < 1:2698682/91‑1 (MQ=255)
tAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGGGCGCGGTAAAGGCTTCGGTcag > 2:210689/1‑91 (MQ=255)
aaCGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGcc > 2:5743330/1‑93 (MQ=255)
cGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGt < 1:2590899/93‑1 (MQ=255)
cGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGt < 1:1095017/93‑1 (MQ=255)
gTATAGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGcc < 1:5536392/93‑1 (MQ=255)
tATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCg > 1:4217242/1‑93 (MQ=255)
aTTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCgg > 1:2023334/1‑93 (MQ=255)
tGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCgggg > 2:5290070/1‑93 (MQ=255)
cGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCa < 2:2926944/93‑1 (MQ=255)
ggACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAg > 2:2972257/1‑93 (MQ=255)
ggACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAg > 1:106525/1‑93 (MQ=255)
gACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGa < 2:1068928/93‑1 (MQ=255)
gACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGa > 2:1751143/1‑93 (MQ=255)
gACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGa > 2:340958/1‑93 (MQ=255)
aCCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGAc < 2:71446/93‑1 (MQ=255)
cAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACgg < 1:5730452/93‑1 (MQ=255)
aaaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACggg > 1:5954737/1‑92 (MQ=255)
aaaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGt > 1:2182808/1‑93 (MQ=255)
aaaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGt < 1:1653972/93‑1 (MQ=255)
aaaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGt < 2:5880960/93‑1 (MQ=255)
aaaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGt > 1:5617265/1‑93 (MQ=255)
aaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTc < 2:389908/93‑1 (MQ=255)
aaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTc > 2:101004/1‑93 (MQ=255)
aaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTc > 2:6109628/1‑93 (MQ=255)
aaaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTc > 2:5145556/1‑93 (MQ=255)
aaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCa < 1:1976189/93‑1 (MQ=255)
aaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCa > 1:5312276/1‑93 (MQ=255)
aaGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGGCGCGCAGCCGGGGCAGACGGTCa > 1:3623647/1‑93 (MQ=255)
gCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGGAGACGGTCATg > 2:1036065/1‑93 (MQ=255)
gATGACGGAAATGTTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCg < 2:254707/93‑1 (MQ=255)
gATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCg > 2:2631617/1‑93 (MQ=255)
gATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCg > 2:4925206/1‑93 (MQ=255)
gATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCg > 2:4762547/1‑93 (MQ=255)
aTGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGt < 1:4451120/93‑1 (MQ=255)
gACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAg > 2:5698085/1‑93 (MQ=255)
gACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAg < 1:217104/93‑1 (MQ=255)
gACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAg > 2:4494259/1‑93 (MQ=255)
aCGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGc < 1:5367889/93‑1 (MQ=255)
gAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCa > 2:13663/1‑93 (MQ=255)
atTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCa < 1:4601763/93‑1 (MQ=255)
ttttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAc < 1:2469513/93‑1 (MQ=255)
ttttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAc < 2:4558856/93‑1 (MQ=255)
ttttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAc > 1:2913097/1‑93 (MQ=255)
tttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcg < 2:4850553/93‑1 (MQ=255)
tttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcg > 2:2053209/1‑93 (MQ=255)
ttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCTGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcgg < 2:346786/93‑1 (MQ=255)
ttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcgg < 2:3126195/93‑1 (MQ=255)
ttCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcgg > 2:1190419/1‑93 (MQ=255)
tCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcggc > 2:3059181/1‑93 (MQ=255)
cAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcggcg > 2:3006751/1‑93 (MQ=255)
cAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcggcg < 2:5809174/93‑1 (MQ=255)
aGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcggcgg > 1:4826627/1‑93 (MQ=255)
aGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAcggcgg > 1:2549337/1‑93 (MQ=255)
cgcCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAt < 2:5402754/93‑1 (MQ=255)
cgcCTGC‑GCGCCCGCGTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCGCACCGCACGGGGGAt < 1:3798688/93‑1 (MQ=255)
gcCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCTGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGGAGCCCACCGCACGGCGGAtc > 1:2312244/1‑93 (MQ=255)
gcCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAtc > 1:1758478/1‑93 (MQ=255)
gcCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAtc > 1:4918886/1‑93 (MQ=255)
|
AAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA > NC_000913/3870784‑3870963
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTCAC > NC_000913/3870783‑3870969
|
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGC > SRR4302534.5849084/1‑94 (MQ=60)
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGC > SRR4302534.5328681/1‑94 (MQ=60)
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGC > SRR4302534.5959053/1‑94 (MQ=60)
CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGC > SRR4302534.2410868/1‑94 (MQ=60)
AAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGC < SRR4302534.5686948/94‑1 (MQ=60)
AGACTGCGATGTCCGATGGCAATACCGCTTTTAACGGTTTGATGTATTGCGGACCACAAGCCGATGACGGAAATATTTTCAGAGCCTGC‑GCGCC > SRR4302534.6551821/1‑94 (MQ=60)
AGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCC > SRR4302534.1518416/1‑94 (MQ=60)
GACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCC < SRR4302534.3586445/94‑1 (MQ=60)
ACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCG > SRR4302534.2125475/1‑94 (MQ=60)
CTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGC > SRR4302534.6489093/1‑94 (MQ=60)
GCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTT < SRR4302534.2650167/94‑1 (MQ=60)
GCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTT < SRR4302534.1660739/94‑1 (MQ=60)
CGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAGGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTC < SRR4302534.4620865/94‑1 (MQ=60)
CGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTC < SRR4302534.5947133/94‑1 (MQ=60)
CGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTC < SRR4302534.4018371/94‑1 (MQ=60)
GATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCG < SRR4302534.2216863/94‑1 (MQ=60)
GATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCG > SRR4302534.4815537/1‑94 (MQ=60)
ATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGA > SRR4302534.5317378/1‑94 (MQ=60)
ATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGA > SRR4302534.85295/1‑94 (MQ=60)
TGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAG > SRR4302534.1063731/1‑94 (MQ=60)
TGTCCGATGGCAATACCGATTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAG < SRR4302534.5074410/94‑1 (MQ=60)
GTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGC > SRR4302534.1769808/1‑94 (MQ=60)
GTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGC < SRR4302534.3443129/94‑1 (MQ=60)
GTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACAAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGC < SRR4302534.3517729/94‑1 (MQ=60)
TCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCG > SRR4302534.3265431/1‑94 (MQ=60)
TCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GAGCCCGCTTCCAGCG > SRR4302534.1045747/1‑94 (MQ=60)
CCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGC > SRR4302534.279763/1‑94 (MQ=60)
CGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCG > SRR4302534.2249569/1‑94 (MQ=60)
GATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGG > SRR4302534.6398338/1‑94 (MQ=60)
GATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGG > SRR4302534.3737446/1‑94 (MQ=60)
ATGGCAATCCCTCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGT < SRR4302534.1505892/94‑1 (MQ=60)
TGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTA < SRR4302534.4062525/94‑1 (MQ=60)
TGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTA < SRR4302534.6539718/94‑1 (MQ=60)
TGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTA > SRR4302534.5856415/1‑94 (MQ=60)
TGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTA < SRR4302534.5078336/94‑1 (MQ=60)
GCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAA > SRR4302534.802121/1‑94 (MQ=60)
CAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAG > SRR4302534.6134408/1‑94 (MQ=60)
AATACCTCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGG < SRR4302534.145020/94‑1 (MQ=60)
AATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGG > SRR4302534.1143427/1‑94 (MQ=60)
AATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGG > SRR4302534.5014295/1‑94 (MQ=60)
AATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGG < SRR4302534.1737221/94‑1 (MQ=60)
AATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGG > SRR4302534.3403965/1‑94 (MQ=60)
ACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTT < SRR4302534.5193882/94‑1 (MQ=60)
ACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTT < SRR4302534.3145619/94‑1 (MQ=60)
ACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTT < SRR4302534.5844442/94‑1 (MQ=60)
CCGCTTTTAACGCTTTGATGTATTGCGGATCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTC > SRR4302534.2004478/1‑94 (MQ=60)
CGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCG < SRR4302534.663025/94‑1 (MQ=60)
CGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCG < SRR4302534.5255428/94‑1 (MQ=60)
GCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGG > SRR4302534.3964021/1‑94 (MQ=60)
GCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGG > SRR4302534.2499274/1‑94 (MQ=60)
CTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGT > SRR4302534.6468611/1‑94 (MQ=60)
CTTTTAACGCTTTGATGTATCGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGT > SRR4302534.6459920/1‑94 (MQ=60)
TTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTC < SRR4302534.5845661/94‑1 (MQ=60)
TTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTCCAGCGCCTGC‑GAGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTC < SRR4302534.4120315/94‑1 (MQ=60)
TTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCG < SRR4302534.4906385/94‑1 (MQ=60)
TTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCG < SRR4302534.3358503/94‑1 (MQ=60)
TATAACGCCTTTATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCG < SRR4302534.2769976/94‑1 (MQ=60)
TAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCC > SRR4302534.449660/1‑94 (MQ=60)
TAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCGTCGGTCGCC < SRR4302534.6487371/94‑1 (MQ=60)
AGCGCTTGGATGTATTGCGGACCAAAAGCCGATGACAGAAATACTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCTCGGTAAAGGCTTCGGTCGCCG < SRR4302534.3935158/94‑1 (MQ=60)
ACGCTTTGATGTATTGCTGACCAAAGGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGTCTTCGGTCGCCGT < SRR4302534.2641646/94‑1 (MQ=60)
ACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGT < SRR4302534.192691/94‑1 (MQ=60)
CGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTC > SRR4302534.5226401/1‑94 (MQ=60)
CGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTC < SRR4302534.1123497/94‑1 (MQ=60)
CGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTC < SRR4302534.3733709/94‑1 (MQ=60)
CGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTC < SRR4302534.2659488/94‑1 (MQ=60)
GCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCG > SRR4302534.2664220/1‑94 (MQ=60)
TTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCG < SRR4302534.2664007/94‑1 (MQ=60)
TGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCA > SRR4302534.1476746/1‑94 (MQ=60)
TGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCA < SRR4302534.5683633/94‑1 (MQ=60)
TGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCC > SRR4302534.3188315/1‑94 (MQ=60)
GTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCG > SRR4302534.4330968/1‑94 (MQ=60)
GTATAGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCG < SRR4302534.5685841/94‑1 (MQ=60)
TATTGCGGACCAAACGCCGATGACCGAAATATTTCCAGCGCCTGC‑GCCCCCGCCTCGAGCGCGGTAAAGACTTCGGTCGCCGTCGCGCAGCCGG < SRR4302534.5369191/94‑1 (MQ=60)
TATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGG > SRR4302534.2076262/1‑94 (MQ=60)
ATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGG > SRR4302534.2622365/1‑94 (MQ=60)
TTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGG < SRR4302534.1409098/94‑1 (MQ=60)
TGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGC < SRR4302534.5496077/94‑1 (MQ=60)
TGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGC > SRR4302534.4784912/1‑94 (MQ=60)
CGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAG > SRR4302534.2043402/1‑94 (MQ=60)
CGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAG < SRR4302534.2570591/94‑1 (MQ=60)
CGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAG > SRR4302534.109369/1‑94 (MQ=60)
GGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGA > SRR4302534.3360051/1‑94 (MQ=60)
GACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCCGAC > SRR4302534.547192/1‑94 (MQ=60)
GACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGAC < SRR4302534.6616848/94‑1 (MQ=60)
CAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGT > SRR4302534.5769262/1‑94 (MQ=60)
CAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGT > SRR4302534.6074306/1‑94 (MQ=60)
CAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGT < SRR4302534.5885732/94‑1 (MQ=60)
CAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGT > SRR4302534.2240509/1‑94 (MQ=60)
CAAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGG > SRR4302534.6116434/1‑94 (MQ=60)
AAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTC < SRR4302534.1697075/94‑1 (MQ=60)
AAAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTC > SRR4302534.3015526/1‑94 (MQ=60)
AAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCA > SRR4302534.5455599/1‑94 (MQ=60)
AAAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGGCGCGCAGCCGGGGCAGACGGTCA > SRR4302534.3721069/1‑94 (MQ=60)
AAGCCTATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCAT < SRR4302534.3045842/94‑1 (MQ=60)
AAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCTCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCAT < SRR4302534.4084287/94‑1 (MQ=60)
AAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCAT < SRR4302534.2027932/94‑1 (MQ=60)
AAGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCAT > SRR4302534.1625398/1‑94 (MQ=60)
AAGCCGATGACGGAAATATTTTCAGCCCCTG‑TGCGCCCGGGTCGAGCGCGGCACAGGCTTCGGCCGCCGTCGCGCAGCCGGGGCTGACGGTCAT > SRR4302534.245227/1‑94 (MQ=48)
AGCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATG < SRR4302534.1690046/94‑1 (MQ=60)
AGCCGATGACGAAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATG < SRR4302534.6033309/94‑1 (MQ=60)
GCCGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGC > SRR4302534.2041166/1‑94 (MQ=60)
CGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCG < SRR4302534.5039960/94‑1 (MQ=60)
CGATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCG < SRR4302534.4587342/94‑1 (MQ=60)
GATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGT > SRR4302534.5620563/1‑94 (MQ=60)
ATGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTA < SRR4302534.4571429/94‑1 (MQ=60)
TGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAG > SRR4302534.2468367/1‑94 (MQ=60)
TGACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAG > SRR4302534.879479/1‑94 (MQ=60)
GACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGC > SRR4302534.2232467/1‑94 (MQ=60)
GACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGC < SRR4302534.222796/94‑1 (MQ=60)
ACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCC > SRR4302534.674929/1‑94 (MQ=60)
ACGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCC < SRR4302534.5512557/94‑1 (MQ=60)
CGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCC > SRR4302534.6440490/1‑94 (MQ=60)
CGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCC > SRR4302534.4773143/1‑94 (MQ=60)
CGGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGACC > SRR4302534.3593206/1‑94 (MQ=60)
CGGAAATATATTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCC > SRR4302534.6489708/1‑94 (MQ=60)
GGAAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCA > SRR4302534.2658113/1‑94 (MQ=60)
AAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACC < SRR4302534.750561/94‑1 (MQ=60)
AAATATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACC < SRR4302534.1605586/94‑1 (MQ=60)
TATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCA < SRR4302534.504920/94‑1 (MQ=60)
TATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCA < SRR4302534.4370712/94‑1 (MQ=60)
ATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAC > SRR4302534.2989558/1‑94 (MQ=60)
ATTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCAC < SRR4302534.4726649/94‑1 (MQ=60)
TTTTCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACG < SRR4302534.2535155/94‑1 (MQ=60)
TCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCG < SRR4302534.5695898/94‑1 (MQ=60)
TCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCG > SRR4302534.3314624/1‑94 (MQ=60)
TCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCG < SRR4302534.6392433/94‑1 (MQ=60)
TCAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCG > SRR4302534.3387297/1‑94 (MQ=60)
CAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGG > SRR4302534.2616932/1‑94 (MQ=60)
CAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGG > SRR4302534.4957605/1‑94 (MQ=60)
CAGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGG > SRR4302534.2889416/1‑94 (MQ=60)
CACCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGG > SRR4302534.3439167/1‑94 (MQ=60)
AGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGA < SRR4302534.2509985/94‑1 (MQ=60)
AGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGA > SRR4302534.2579189/1‑94 (MQ=60)
AGCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGA > SRR4302534.1103073/1‑94 (MQ=60)
GCGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGAT < SRR4302534.1102371/94‑1 (MQ=60)
CGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCTGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGGAGCCCACCGCACGGCGGATC > SRR4302534.2373602/1‑94 (MQ=60)
CGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATC > SRR4302534.5052206/1‑94 (MQ=60)
CGCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATC > SRR4302534.1804113/1‑94 (MQ=60)
CGCCTGC‑GCGCCCGCGTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCGCACCGCACGGGGGATC < SRR4302534.3900685/94‑1 (MQ=60)
GCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA > SRR4302534.2264004/1‑94 (MQ=60)
GCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA < SRR4302534.3265425/94‑1 (MQ=60)
GCCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCA > SRR4302534.5401556/1‑94 (MQ=60)
CCTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCAC > SRR4302534.1945452/1‑94 (MQ=60)
CTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACT < SRR4302534.5902428/94‑1 (MQ=60)
CTGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACT < SRR4302534.5749108/94‑1 (MQ=60)
TGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTT > SRR4302534.887291/1‑94 (MQ=60)
TGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTT < SRR4302534.4373832/94‑1 (MQ=60)
TGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTT < SRR4302534.6045335/94‑1 (MQ=60)
TGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTT < SRR4302534.4022318/94‑1 (MQ=60)
TGC‑GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTT > SRR4302534.5838196/1‑94 (MQ=60)
gcGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTC < SRR4302534.3077983/92‑1 (MQ=60)
gcGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTC > SRR4302534.6098941/3‑94 (MQ=60)
gcGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTC > SRR4302534.5405841/3‑94 (MQ=60)
CGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTCA < SRR4302534.4706164/94‑1 (MQ=60)
GCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGCTCACTTCAC > SRR4302534.3620794/1‑94 (MQ=60)
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CAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAATATTTTCAGCGCCTGCGGCGCCCGCTTCGAGCGCGGTAAAGGCTTCGGTCGCCGTCGCGCAGCCGGGGCAGACGGTCATGCCGTAGCCCACCGCACGGCGGATCACTTCAC > NC_000913/3870783‑3870969
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
