Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,018,552 |
A→G |
Y247C (TAC→TGC) |
yigR → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,018,552 | 0 | A | G | 100.0%
| 749.2
/ NA
| 216 | Y247C (TAC→TGC) | yigR | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (115/101); total (115/101) |
Only 100 of 217 total aligned reads displayed.
GGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTACGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCA > NC_000913/4018462‑4018641
|
ggCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCg > 1:1677321/1‑93 (MQ=255)
gcgcAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCgg > 2:5516366/1‑93 (MQ=255)
gcgcAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCgg > 2:4777322/1‑93 (MQ=255)
gcAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCa < 1:2350721/93‑1 (MQ=255)
cAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCAt > 2:4157829/1‑93 (MQ=255)
cAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCAt < 2:5628072/93‑1 (MQ=255)
cAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCAt < 1:2126082/93‑1 (MQ=255)
aaTTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCAtt > 1:4913647/1‑93 (MQ=255)
aTTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCACTc > 1:389289/1‑93 (MQ=255)
ttttGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTcc < 1:5078677/93‑1 (MQ=255)
tGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGgt > 2:3633801/1‑93 (MQ=255)
gAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGgtg < 1:2483189/93‑1 (MQ=255)
aaGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGgtgt < 1:2776407/93‑1 (MQ=255)
aGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTc < 1:3037035/93‑1 (MQ=255)
aGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTc > 2:2048427/1‑93 (MQ=255)
aGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTc > 1:1501010/1‑93 (MQ=255)
gACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCt > 1:1081337/1‑93 (MQ=255)
gACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCt < 1:3055814/93‑1 (MQ=255)
cAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGa < 1:5711363/93‑1 (MQ=255)
ccGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGtt < 1:2682289/93‑1 (MQ=255)
gATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGCTGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTgc > 1:3505594/1‑93 (MQ=255)
gATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTgc < 1:547683/93‑1 (MQ=255)
gATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTgc > 1:3758475/1‑93 (MQ=255)
aTGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTgcg > 2:1929996/1‑93 (MQ=255)
aTGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTgcg > 1:4829016/1‑93 (MQ=255)
aTGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTgcg < 2:2631411/93‑1 (MQ=255)
tGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTgcgg > 2:707080/1‑93 (MQ=255)
tctACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGgcgc > 2:1306398/1‑93 (MQ=255)
tctACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGgcgc > 1:6293147/1‑93 (MQ=255)
ctACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCt > 2:6453628/1‑93 (MQ=255)
ctACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCt < 2:570780/93‑1 (MQ=255)
ctACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCt < 1:1909542/93‑1 (MQ=255)
tACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTg > 2:575482/1‑93 (MQ=255)
tACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTg > 2:206958/1‑93 (MQ=255)
aCATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTgg > 1:4675039/1‑93 (MQ=255)
ccGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGaaa < 1:3416914/93‑1 (MQ=255)
cGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGaaaa > 2:3653221/1‑93 (MQ=255)
ggAAGTTTACCCTGTCTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGaaaaa > 2:5585625/1‑93 (MQ=255)
ggAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGaaaaa < 1:6072798/93‑1 (MQ=255)
ggAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGaaaaa < 2:2450949/93‑1 (MQ=255)
ggAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGaaaaa < 1:319329/93‑1 (MQ=255)
ggAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGaaaaa > 1:4556222/1‑93 (MQ=255)
aGTTTACCCTGACTATTGTAGTGAAGGGATGATGGCGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGCGAAAAACgg > 2:1762526/1‑93 (MQ=255)
aCCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTa < 2:4055027/93‑1 (MQ=255)
aCCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTa < 2:5869021/93‑1 (MQ=255)
aCCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGGGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTa > 2:4294550/1‑93 (MQ=255)
cccTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTaa < 2:4194237/93‑1 (MQ=255)
cccTGACTATTGTAGTGAAGGGATGATGGGGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTaa > 2:3089008/1‑93 (MQ=255)
cTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACa < 1:928103/93‑1 (MQ=255)
cTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACa < 1:3555844/93‑1 (MQ=255)
tGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACAt > 1:4453505/1‑93 (MQ=255)
gACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACAta > 2:6352075/1‑92 (MQ=255)
gACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATg < 1:1730499/93‑1 (MQ=255)
aCTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGa > 2:5087354/1‑93 (MQ=255)
tATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGaaa < 1:2230516/93‑1 (MQ=255)
tATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGaaa > 1:5991811/1‑93 (MQ=255)
tATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGaaa > 1:3096355/1‑93 (MQ=255)
ttGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAGACGGCACTAACATGAAAtt < 1:6304214/93‑1 (MQ=255)
ttGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAAtt < 2:6218903/93‑1 (MQ=255)
tGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTg > 1:5120082/1‑93 (MQ=255)
gTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGc > 1:2949828/1‑93 (MQ=255)
tAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCt < 1:4877809/93‑1 (MQ=255)
aGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTg > 2:5223938/1‑93 (MQ=255)
aGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTg > 1:5761566/1‑93 (MQ=255)
gTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTgg > 2:2261890/1‑93 (MQ=255)
gTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTgg < 1:1434942/93‑1 (MQ=255)
gTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTgg > 2:3333987/1‑93 (MQ=255)
gTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTgg > 2:3591304/1‑93 (MQ=255)
gTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTgg < 2:4140753/93‑1 (MQ=255)
gTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACAAACATGAAATTGCTgg < 2:5829657/93‑1 (MQ=255)
tGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGc < 1:3779484/93‑1 (MQ=255)
aaGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCgg > 2:2549517/1‑93 (MQ=255)
aaGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCgg < 2:2814461/93‑1 (MQ=255)
gggATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGaa < 2:15357/93‑1 (MQ=255)
ggATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAAc > 2:1406996/1‑93 (MQ=255)
gatgatGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAAcg < 1:2114445/93‑1 (MQ=255)
atgatgGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAAcgc < 2:4970967/93‑1 (MQ=255)
atgatgGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAAcgc > 1:4278968/1‑93 (MQ=255)
atgatgGTGATGGAGCGCATTTGCGGCATTCCGGTGCCTGATGTTGCGGCACTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAAcgc < 1:4754802/93‑1 (MQ=255)
tgatggtgatggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAAcgcg < 1:4069823/93‑1 (MQ=255)
aatggtgatggAGCGCA‑TTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACgcggc < 1:201290/92‑1 (MQ=255)
atggtgatggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACgcggc < 2:6145830/93‑1 (MQ=255)
atggtgatggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACgcggc > 1:3355909/1‑93 (MQ=255)
atggtgatggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACgcggc > 1:19936/1‑93 (MQ=255)
ggtgatggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGt < 1:619416/93‑1 (MQ=255)
ggtgatggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGt > 2:2139388/1‑93 (MQ=255)
gatggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCa > 1:2724517/1‑93 (MQ=255)
atggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAg > 1:1196253/1‑93 (MQ=255)
tggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAgg < 2:5445075/93‑1 (MQ=255)
ggAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGgt < 1:5269454/93‑1 (MQ=255)
aGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGgtgt < 2:3815900/93‑1 (MQ=255)
aGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGgtgt > 1:5558112/1‑93 (MQ=255)
cgcATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGttc < 1:4957179/93‑1 (MQ=255)
cgcAGTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGttc < 2:3225111/93‑1 (MQ=255)
gcATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGttct < 1:586065/93‑1 (MQ=255)
ccATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGttct < 1:2552745/92‑1 (MQ=255)
cATTTGCGGCATTCCGGTGTCTGATGTTGCGGCTCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGttctt < 2:4616228/93‑1 (MQ=255)
cATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGttctt > 1:733195/1‑93 (MQ=255)
tttGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCa > 2:2603699/1‑93 (MQ=255)
tttGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGGGCAGGGGtttttcc > 2:2560034/1‑92 (MQ=255)
|
GGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTACGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCA > NC_000913/4018462‑4018641
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTACGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCACTCA > NC_000913/4018459‑4018645
|
TTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTG < SRR4302534.534072/94‑1 (MQ=60)
TTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTG < SRR4302534.1107451/94‑1 (MQ=60)
TTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTG < SRR4302534.724715/94‑1 (MQ=60)
TTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTG > SRR4302534.580922/1‑94 (MQ=60)
TTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTG > SRR4302534.5821039/1‑94 (MQ=60)
TCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGC < SRR4302534.759276/94‑1 (MQ=60)
CGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCG > SRR4302534.1720964/1‑94 (MQ=60)
GCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCAT < SRR4302534.2413108/94‑1 (MQ=60)
CAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATT < SRR4302534.2182068/94‑1 (MQ=60)
CAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATT > SRR4302534.5046822/1‑94 (MQ=60)
CAATATTGAAGACAGCCCGATGCTCTACATCCCGAAAGTTTACACTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATT < SRR4302534.6644455/94‑1 (MQ=60)
AATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCACTC > SRR4302534.399237/1‑94 (MQ=60)
ATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCC < SRR4302534.3146580/94‑1 (MQ=60)
ATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCC < SRR4302534.2897209/94‑1 (MQ=60)
ATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCC < SRR4302534.3462655/94‑1 (MQ=60)
TTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCG < SRR4302534.5215766/94‑1 (MQ=60)
TGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTG < SRR4302534.2176859/94‑1 (MQ=60)
GAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGT < SRR4302534.2549135/94‑1 (MQ=60)
GAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGT < SRR4302534.3630006/94‑1 (MQ=60)
AAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTC > SRR4302534.6268957/1‑94 (MQ=60)
AAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTC < SRR4302534.2849452/94‑1 (MQ=60)
AAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTC < SRR4302534.3480508/94‑1 (MQ=60)
AAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTC > SRR4302534.1540521/1‑94 (MQ=60)
AGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCT < SRR4302534.3116669/94‑1 (MQ=60)
AGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCT > SRR4302534.3377915/1‑94 (MQ=60)
AGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCT > SRR4302534.1109448/1‑94 (MQ=60)
GACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTG < SRR4302534.3135995/94‑1 (MQ=60)
CAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGAT < SRR4302534.5866089/94‑1 (MQ=60)
CAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGAT > SRR4302534.2593538/1‑94 (MQ=60)
AGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATG > SRR4302534.3764106/1‑94 (MQ=60)
CCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTG < SRR4302534.2753193/94‑1 (MQ=60)
CGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGCTGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGC > SRR4302534.3599903/1‑94 (MQ=60)
CGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGC > SRR4302534.3859399/1‑94 (MQ=60)
GATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCG < SRR4302534.561201/94‑1 (MQ=60)
GATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCG > SRR4302534.4960045/1‑94 (MQ=60)
ATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGG > SRR4302534.4935143/1‑94 (MQ=60)
ATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGG < SRR4302534.5608896/94‑1 (MQ=60)
ATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGG > SRR4302534.1219002/1‑94 (MQ=60)
TGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCTGCATTCCGGTGTCTGATGTTGCGGC < SRR4302534.4280033/94‑1 (MQ=60)
CTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGC > SRR4302534.6463392/1‑94 (MQ=60)
CTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTG < SRR4302534.1959377/94‑1 (MQ=60)
CTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTG < SRR4302534.3135916/94‑1 (MQ=60)
CTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTG < SRR4302534.4693047/94‑1 (MQ=60)
TACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGG > SRR4302534.4801941/1‑94 (MQ=60)
TACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGG < SRR4302534.5211172/94‑1 (MQ=60)
CATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAG > SRR4302534.6575971/1‑94 (MQ=60)
CATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAG > SRR4302534.2302565/1‑94 (MQ=60)
TCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAA < SRR4302534.5669504/94‑1 (MQ=60)
CCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGatggcgcaa > SRR4302534.2323311/1‑85 (MQ=60)
CCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAA > SRR4302534.3085407/1‑94 (MQ=60)
CCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAA < SRR4302534.523671/94‑1 (MQ=60)
CCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAA < SRR4302534.3508712/94‑1 (MQ=60)
CGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAA > SRR4302534.3871421/1‑94 (MQ=60)
CGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAA > SRR4302534.4679749/1‑94 (MQ=60)
GGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAAC < SRR4302534.327563/94‑1 (MQ=60)
GGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAAC < SRR4302534.2032310/94‑1 (MQ=60)
GGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAAC < SRR4302534.6237914/94‑1 (MQ=60)
GAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACG < SRR4302534.1767397/94‑1 (MQ=60)
GAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACG < SRR4302534.5011369/94‑1 (MQ=60)
TTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACT < SRR4302534.2053834/94‑1 (MQ=60)
ACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAA > SRR4302534.3587933/1‑94 (MQ=60)
CCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAAC < SRR4302534.4024689/94‑1 (MQ=60)
CCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTAGAGAAAAACGGCACTAAC > SRR4302534.6090589/1‑94 (MQ=60)
CCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACA > SRR4302534.6224524/1‑94 (MQ=60)
CTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACAT > SRR4302534.4573883/1‑94 (MQ=60)
CTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACAT < SRR4302534.951725/94‑1 (MQ=60)
CTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACAT < SRR4302534.3651517/94‑1 (MQ=60)
TGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATG > SRR4302534.1509810/1‑94 (MQ=60)
GACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGA < SRR4302534.1775444/94‑1 (MQ=60)
GACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGA > SRR4302534.4816780/1‑94 (MQ=60)
CTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAA > SRR4302534.3177807/1‑94 (MQ=60)
CTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAA > SRR4302534.6154585/1‑94 (MQ=60)
TATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAAT > SRR4302534.5002193/1‑94 (MQ=60)
TATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAAT < SRR4302534.2289590/94‑1 (MQ=60)
TATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAAT > SRR4302534.2381007/1‑94 (MQ=60)
ATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATT > SRR4302534.5079386/1‑94 (MQ=60)
ATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATT < SRR4302534.6429365/94‑1 (MQ=60)
TTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAGACGGCACTAACATGAAATTG < SRR4302534.6474694/94‑1 (MQ=60)
TTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTG < SRR4302534.2474944/94‑1 (MQ=60)
TTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTG > SRR4302534.5258329/1‑94 (MQ=60)
TGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGC < SRR4302534.6027626/94‑1 (MQ=60)
TGTAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGC > SRR4302534.3027200/1‑94 (MQ=60)
TAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTG > SRR4302534.5917864/1‑94 (MQ=60)
TAGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTG < SRR4302534.5010105/94‑1 (MQ=60)
AGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGG < SRR4302534.5344583/94‑1 (MQ=60)
AGTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGG > SRR4302534.2743496/1‑94 (MQ=60)
GTGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGC < SRR4302534.1472696/94‑1 (MQ=60)
TGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCG > SRR4302534.1845986/1‑94 (MQ=60)
TGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCG < SRR4302534.3880955/94‑1 (MQ=60)
TGAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCG < SRR4302534.5300278/94‑1 (MQ=60)
GAAGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGCAAAACGGCACTAACATGAAATTGCTGGAGG > SRR4302534.2249392/1‑94 (MQ=60)
AGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAA > SRR4302534.4049447/1‑94 (MQ=60)
AGGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAA > SRR4302534.4575909/1‑94 (MQ=60)
GGGATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAAC > SRR4302534.645401/1‑94 (MQ=60)
GATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGC > SRR4302534.4394777/1‑94 (MQ=60)
GATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGC < SRR4302534.2170067/94‑1 (MQ=60)
ATGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGCCTGATGTTGCGGCACTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCG < SRR4302534.4883876/94‑1 (MQ=60)
TGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGG > SRR4302534.897064/1‑94 (MQ=60)
TGATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGG < SRR4302534.4179031/94‑1 (MQ=60)
GATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGC > SRR4302534.3445782/1‑94 (MQ=60)
GATGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGC > SRR4302534.20462/1‑94 (MQ=60)
AATGGTGATGGAGCGCA‑TTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCG < SRR4302534.206579/94‑1 (MQ=60)
TGGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGT < SRR4302534.2960545/94‑1 (MQ=60)
GGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTG < SRR4302534.2815287/94‑1 (MQ=60)
GGTGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTG < SRR4302534.634460/94‑1 (MQ=60)
TGATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCA > SRR4302534.2796390/1‑94 (MQ=60)
TGATGGAGCGCATGTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCA < SRR4302534.2106178/94‑1 (MQ=60)
GATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAG > SRR4302534.1227732/1‑94 (MQ=60)
GATGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAG < SRR4302534.5874006/94‑1 (MQ=60)
TGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGT > SRR4302534.32375/1‑94 (MQ=60)
TGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGT < SRR4302534.195660/94‑1 (MQ=60)
TGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGG > SRR4302534.1411382/1‑94 (MQ=60)
TGGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGG > SRR4302534.453561/1‑94 (MQ=60)
GGAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTG < SRR4302534.5411795/94‑1 (MQ=60)
GAGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGT > SRR4302534.5708174/1‑94 (MQ=60)
AGCGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTT < SRR4302534.5981144/94‑1 (MQ=60)
CGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCT > SRR4302534.4886803/1‑94 (MQ=60)
CGCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCT < SRR4302534.5091427/94‑1 (MQ=60)
GCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTT < SRR4302534.5853980/94‑1 (MQ=60)
GCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTT < SRR4302534.1608469/94‑1 (MQ=60)
GCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTT > SRR4302534.751328/1‑94 (MQ=60)
GCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTT < SRR4302534.600380/94‑1 (MQ=60)
GCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTT < SRR4302534.2788531/94‑1 (MQ=60)
CCATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTT < SRR4302534.2620427/94‑1 (MQ=60)
CATTTGCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTC > SRR4302534.388789/1‑94 (MQ=60)
TTGCGGCATGCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCACT < SRR4302534.1860351/94‑1 (MQ=60)
GCGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCACTCA > SRR4302534.786915/1‑94 (MQ=60)
|
TTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTACGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCACTCA > NC_000913/4018459‑4018645
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
