Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,097,268 |
T→C |
H280R (CAC→CGC) |
rhaT ← |
RhaT |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,097,268 | 0 | T | C | 99.6%
| 802.5
/ ‑4.5
| 232 | H280R (CAC→CGC) | rhaT | RhaT |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (112/119); total (112/120) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.03e-01 |
Only 100 of 236 total aligned reads displayed.
AGCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGTGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTGCC > NC_000913/4097178‑4097357
|
aGCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCgg > 1:37782/1‑93 (MQ=255)
aGCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCgg < 2:611234/93‑1 (MQ=255)
gCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGc > 2:3728611/1‑93 (MQ=255)
cccAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGccc < 1:425468/92‑1 (MQ=255)
ccAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGcccc < 2:5173790/93‑1 (MQ=255)
cAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCa > 2:4181381/1‑93 (MQ=255)
aGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAg < 1:2338256/93‑1 (MQ=255)
aGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAg < 1:361607/93‑1 (MQ=255)
gCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAgg > 1:1992283/1‑93 (MQ=255)
cccGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGc < 1:303759/93‑1 (MQ=255)
cgacgaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCAt < 2:5530628/93‑1 (MQ=255)
cgacgaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCAt > 2:2314815/1‑93 (MQ=255)
gacgaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATa > 1:655591/1‑93 (MQ=255)
gacgaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATa < 1:3566179/93‑1 (MQ=255)
acgaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAg > 2:1926606/1‑93 (MQ=255)
acgaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAg > 1:5165433/1‑93 (MQ=255)
acgaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAg < 2:720835/93‑1 (MQ=255)
gaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGaa > 2:1846199/1‑93 (MQ=255)
gaTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGaa < 2:5988734/93‑1 (MQ=255)
aTACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGaaa > 1:3570166/1‑93 (MQ=255)
tACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGaaaa < 1:1011627/93‑1 (MQ=255)
tACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGaaaa < 2:5378762/93‑1 (MQ=255)
aCCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGaaaaa > 1:4031936/1‑93 (MQ=255)
ccgccgCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAg > 2:4696196/1‑93 (MQ=255)
ccgccgCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAg > 2:5511244/1‑93 (MQ=255)
cgccgcACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGa > 1:1450334/1‑93 (MQ=255)
cgccgcACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGa > 2:6359953/1‑93 (MQ=255)
cgcACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAAtt < 1:3345153/93‑1 (MQ=255)
cgcACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAAtt < 2:2070539/93‑1 (MQ=255)
cgcACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAAtt > 2:1488232/1‑93 (MQ=255)
cacaATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGc > 1:598412/1‑93 (MQ=255)
acaATACATAGAAACTCATATGCAGCATCTAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCa < 2:4852324/93‑1 (MQ=255)
acaATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCGCCAGGCATAGAAAAAGAATTGCa > 1:6378763/1‑93 (MQ=255)
acaATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCa < 2:6334906/93‑1 (MQ=255)
acaATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCa > 1:1559504/1‑93 (MQ=255)
acaATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCa > 1:6015941/1‑93 (MQ=255)
caATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAg > 2:6276619/1‑93 (MQ=255)
aaTACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGa < 2:1534630/93‑1 (MQ=255)
aTACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGAt < 2:3432613/93‑1 (MQ=255)
aTACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGAt > 2:6152923/1‑93 (MQ=255)
aCATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATAc < 1:5041380/93‑1 (MQ=255)
cATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATAcc > 2:3855809/1‑93 (MQ=255)
tAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACcac > 1:97558/1‑93 (MQ=255)
aGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACcaca > 2:4264609/1‑93 (MQ=255)
gAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACAt > 1:5835335/1‑93 (MQ=255)
gAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACAt > 2:5716480/1‑93 (MQ=255)
aCTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCaa < 1:2873930/93‑1 (MQ=255)
cTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAAc < 2:590703/93‑1 (MQ=255)
cTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAAc < 2:216160/93‑1 (MQ=255)
tCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAAcc < 2:3350230/93‑1 (MQ=255)
tCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAAcc < 2:941228/93‑1 (MQ=255)
cATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAAccc < 1:5231720/93‑1 (MQ=255)
atatGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCg > 2:2207824/1‑93 (MQ=255)
tatGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGc > 2:3455539/1‑93 (MQ=255)
tGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGCAAAAGAATTGCAGATACCACATCAACCCGccc > 1:4473119/1‑93 (MQ=255)
tGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGccc > 1:996858/1‑93 (MQ=255)
gcagcaTCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCa > 1:1310110/1‑93 (MQ=255)
agcaTCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAgt > 2:1666994/1‑93 (MQ=255)
gcaTCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAgtg < 1:3082012/93‑1 (MQ=255)
gcaTCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAgtg < 2:3815238/93‑1 (MQ=255)
caTCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAgtgt < 2:2945885/93‑1 (MQ=255)
tCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCg > 1:4855048/1‑93 (MQ=255)
ccAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCga < 1:4536819/93‑1 (MQ=255)
ccAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCga > 2:180694/1‑93 (MQ=255)
aaCTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCgaga < 1:853951/93‑1 (MQ=255)
aCTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCTACCCGCCCAGTGTCGagag < 1:6297074/93‑1 (MQ=255)
aCTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGagag < 2:130886/93‑1 (MQ=255)
tGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTa > 2:1083753/1‑93 (MQ=255)
tGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTa < 2:5948792/93‑1 (MQ=255)
gATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTaa < 2:5070722/93‑1 (MQ=255)
aTGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAac < 1:2471540/93‑1 (MQ=255)
aTGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTATCGAGAGTAac < 2:2888714/93‑1 (MQ=255)
gTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAacac > 2:4794653/1‑93 (MQ=255)
tAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAAcaca < 1:5578196/93‑1 (MQ=255)
tAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAAcaca > 2:6050415/1‑93 (MQ=255)
aGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACAt < 1:887978/93‑1 (MQ=255)
tCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATtg < 1:791400/93‑1 (MQ=255)
tCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATtg < 1:5658205/93‑1 (MQ=255)
tCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATtg > 2:4098762/1‑93 (MQ=255)
cATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATtgt > 2:4277185/1‑93 (MQ=255)
cATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATtgt < 1:2773113/93‑1 (MQ=255)
cATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATtgt < 2:5703280/93‑1 (MQ=255)
aTACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATtgtg > 2:3219658/1‑93 (MQ=255)
cTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAAt < 2:5212823/93‑1 (MQ=255)
tGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATg > 1:4135620/1‑93 (MQ=255)
gcgcCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGa < 1:2234324/93‑1 (MQ=255)
ccGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCACCCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCa < 1:4720261/93‑1 (MQ=255)
ccGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCa < 2:2816568/93‑1 (MQ=255)
ccGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCa > 2:1183561/1‑93 (MQ=255)
cGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCACCCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAg < 1:3758597/93‑1 (MQ=255)
cGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAg > 1:5423619/1‑93 (MQ=255)
ggAATGCGGGCGCGGCGCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCAGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGc < 2:2496331/93‑1 (MQ=255)
ggAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGc > 1:4771137/1‑93 (MQ=255)
ggAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGc > 2:459291/1‑93 (MQ=255)
gAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCg < 1:1700143/93‑1 (MQ=255)
aTGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGAt < 2:3276317/93‑1 (MQ=255)
gCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGAttt < 2:165056/93‑1 (MQ=255)
gCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGAttt < 2:3581621/93‑1 (MQ=255)
cGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGAtttt < 1:1613179/93‑1 (MQ=255)
gggCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTg > 2:2624463/1‑93 (MQ=255)
|
AGCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGTGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTGCC > NC_000913/4097178‑4097357
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAGCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGTGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTGCCAGCG > NC_000913/4097176‑4097361
|
TCAGCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCG < SRR4302534.1781962/94‑1 (MQ=60)
CAGCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGG > SRR4302534.38789/1‑94 (MQ=60)
CCCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCC < SRR4302534.436333/94‑1 (MQ=60)
CCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCA < SRR4302534.3018428/94‑1 (MQ=60)
CAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAG > SRR4302534.5875966/1‑94 (MQ=60)
AGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGG > SRR4302534.2044445/1‑94 (MQ=60)
AGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGG < SRR4302534.370824/94‑1 (MQ=60)
AGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGG < SRR4302534.2400305/94‑1 (MQ=60)
GCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGC < SRR4302534.3292426/94‑1 (MQ=60)
CCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCA < SRR4302534.311587/94‑1 (MQ=60)
CGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATA > SRR4302534.671557/1‑94 (MQ=60)
GACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAG < SRR4302534.3662105/94‑1 (MQ=60)
GACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAG > SRR4302534.5304672/1‑94 (MQ=60)
GATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAA > SRR4302534.3666190/1‑94 (MQ=60)
ATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAA > SRR4302534.965599/1‑94 (MQ=60)
TACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAA < SRR4302534.1037648/94‑1 (MQ=60)
TACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAA > SRR4302534.4140024/1‑94 (MQ=60)
ACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAG < SRR4302534.5352467/94‑1 (MQ=60)
CCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGA > SRR4302534.1488491/1‑94 (MQ=60)
CGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAA > SRR4302534.2787879/1‑94 (MQ=60)
CGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAA > SRR4302534.4461877/1‑94 (MQ=60)
GCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAAT > SRR4302534.163093/1‑94 (MQ=60)
GCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAACAAT > SRR4302534.5147388/1‑94 (MQ=60)
CGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTG > SRR4302534.1925086/1‑94 (MQ=60)
CGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTG < SRR4302534.3434695/94‑1 (MQ=60)
GCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGC > SRR4302534.613004/1‑94 (MQ=60)
CACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCGCCAGGCATAGAAAAAGAATTGCA > SRR4302534.6551053/1‑94 (MQ=60)
CACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCA > SRR4302534.1600325/1‑94 (MQ=60)
CACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCA > SRR4302534.6179405/1‑94 (MQ=60)
CACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCA > SRR4302534.2967325/1‑94 (MQ=60)
ACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAG < SRR4302534.1563604/94‑1 (MQ=60)
AATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGAT < SRR4302534.1018654/94‑1 (MQ=60)
AATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGAT < SRR4302534.236755/94‑1 (MQ=60)
TACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATAC < SRR4302534.6151285/94‑1 (MQ=60)
ACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACC < SRR4302534.5177528/94‑1 (MQ=60)
ACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACC < SRR4302534.3989039/94‑1 (MQ=60)
ATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCAC > SRR4302534.100162/1‑94 (MQ=60)
AGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACAT > SRR4302534.5993755/1‑94 (MQ=60)
AAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCA > SRR4302534.5108405/1‑94 (MQ=60)
AAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCA < SRR4302534.3354008/94‑1 (MQ=60)
ACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAAC < SRR4302534.2949395/94‑1 (MQ=60)
ACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAAC < SRR4302534.458830/94‑1 (MQ=60)
CTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACC < SRR4302534.6625801/94‑1 (MQ=60)
TCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGTGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCC < SRR4302534.3132691/94‑1 (MQ=60)
CATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCG < SRR4302534.5372959/94‑1 (MQ=60)
ATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGC > SRR4302534.682283/1‑94 (MQ=60)
ATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGTGGGCGAGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCC > SRR4302534.3864090/1‑94 (MQ=60)
ATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGCAAAAGAATTGCAGATACCACATCAACCCGCCC > SRR4302534.4594116/1‑94 (MQ=60)
ATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCC > SRR4302534.1022396/1‑94 (MQ=60)
TGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCA > SRR4302534.1344659/1‑94 (MQ=60)
GCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAG > SRR4302534.88833/1‑94 (MQ=60)
CAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGT < SRR4302534.178697/94‑1 (MQ=60)
GCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGT > SRR4302534.5882276/1‑94 (MQ=60)
GCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGT < SRR4302534.3162994/94‑1 (MQ=60)
CATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTC < SRR4302534.1053980/94‑1 (MQ=60)
CATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTC > SRR4302534.4755050/1‑94 (MQ=60)
CATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTC < SRR4302534.6130284/94‑1 (MQ=60)
CATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTC < SRR4302534.2905069/94‑1 (MQ=60)
CATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTC < SRR4302534.6197790/94‑1 (MQ=60)
CATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTC < SRR4302534.3772436/94‑1 (MQ=60)
ATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCG > SRR4302534.5192551/1‑94 (MQ=60)
ATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCG > SRR4302534.4986771/1‑94 (MQ=60)
ATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCG > SRR4302534.3576367/1‑94 (MQ=60)
ATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCG < SRR4302534.5442249/94‑1 (MQ=60)
TCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGA < SRR4302534.2476089/94‑1 (MQ=60)
CCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAG > SRR4302534.4313767/1‑94 (MQ=60)
CCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAG < SRR4302534.4659773/94‑1 (MQ=60)
AACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAG > SRR4302534.1418503/1‑94 (MQ=60)
AACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAG < SRR4302534.875496/94‑1 (MQ=60)
ACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCTACCCGCCCAGTGTCGAGAGT < SRR4302534.6467388/94‑1 (MQ=60)
ACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGT > SRR4302534.4790695/1‑94 (MQ=60)
ACTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGT > SRR4302534.5626969/1‑94 (MQ=60)
CTGATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTA > SRR4302534.5384380/1‑94 (MQ=60)
ATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACA > SRR4302534.826601/1‑94 (MQ=60)
ATGTAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACA < SRR4302534.2537229/94‑1 (MQ=60)
TAGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACAT < SRR4302534.5728878/94‑1 (MQ=60)
AGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATT < SRR4302534.910460/94‑1 (MQ=60)
AGTCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATT > SRR4302534.4040866/1‑94 (MQ=60)
TCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGT < SRR4302534.5811385/94‑1 (MQ=60)
TCATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGT < SRR4302534.811221/94‑1 (MQ=60)
CATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTG < SRR4302534.2846082/94‑1 (MQ=60)
ATACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGA > SRR4302534.3663057/1‑94 (MQ=60)
TACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAA > SRR4302534.2200831/1‑94 (MQ=60)
ACTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAAT < SRR4302534.1536257/94‑1 (MQ=60)
ACGGCGCCGAAATGCGGGCGCGGCCCAAGGCATAAAAAAAGAATTGCAAATACCACATCAACCCGCCCAGTGTCGAGAGAAACCCATTGTAAAT < SRR4302534.3669707/94‑1 (MQ=60)
CTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATG < SRR4302534.4390556/94‑1 (MQ=60)
CTGCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATG > SRR4302534.4247193/1‑94 (MQ=60)
GCGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGAT < SRR4302534.2293514/94‑1 (MQ=60)
CGCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATC > SRR4302534.3680581/1‑94 (MQ=60)
TCCGGAATACGGGCGTGGCACCAGGCACAGAAAAAGAATTGCAAATTCCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCA < SRR4302534.4191693/94‑1 (MQ=60)
GCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCA < SRR4302534.3686340/94‑1 (MQ=60)
GCCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCA > SRR4302534.6231985/1‑94 (MQ=60)
CCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCACCCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAG < SRR4302534.4848451/94‑1 (MQ=60)
CCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAG > SRR4302534.5569572/1‑94 (MQ=60)
CCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAG < SRR4302534.242436/94‑1 (MQ=60)
CCGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAG < SRR4302534.6488839/94‑1 (MQ=60)
CGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCACCCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGC < SRR4302534.3859524/94‑1 (MQ=60)
CGGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGC > SRR4302534.4900681/1‑94 (MQ=60)
GGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCG > SRR4302534.1724372/1‑94 (MQ=60)
GGAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCG > SRR4302534.879290/1‑94 (MQ=60)
GAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGA < SRR4302534.1744319/94‑1 (MQ=60)
GAATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGA < SRR4302534.4174317/94‑1 (MQ=60)
AATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGAT < SRR4302534.6627047/94‑1 (MQ=60)
ATGCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATT > SRR4302534.4918424/1‑94 (MQ=60)
GCGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTT > SRR4302534.4884809/1‑94 (MQ=60)
CGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTG < SRR4302534.1655282/94‑1 (MQ=60)
CGGGCGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTG > SRR4302534.5743570/1‑94 (MQ=60)
CGCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTGCCAG > SRR4302534.727850/1‑94 (MQ=60)
GCGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTGCCAGC < SRR4302534.5206776/94‑1 (MQ=60)
CGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTGCCAGCG > SRR4302534.227115/1‑94 (MQ=60)
CGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTGCCAGCG > SRR4302534.4344058/1‑94 (MQ=60)
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TCAGCACCAGCCCGACGATACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTGATGTAGTCATACTGCGCCGGAATGCGGGCGTGGCCCCAGGCATAGAAAAAGAATTGCAGATACCACATCAACCCGCCCAGTGTCGAGAGTAACACATTGTGAATGATCAGCGATTTTGCCAGCG > NC_000913/4097176‑4097361
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
