Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,139,091 |
A→G |
R115R (CGT→CGC) |
ptsA ← |
PEP‑protein phosphotransferase system enzyme I/IIA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,139,091 | 0 | A | G | 99.6%
| 929.5
/ NA
| 270 | R115R (CGT→CGC) | ptsA | PEP‑protein phosphotransferase system enzyme I/IIA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (123/146); minor base T (0/1); total (123/147) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 274 total aligned reads displayed.
GGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCACGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGC > NC_000913/4139002‑4139183
|
ggCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGt < 1:5339865/93‑1 (MQ=255)
ggCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGt < 1:2806255/93‑1 (MQ=255)
gCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGtt < 1:3790896/93‑1 (MQ=255)
gCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGtt > 2:3008654/1‑93 (MQ=255)
cTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTc > 2:3688803/1‑93 (MQ=255)
tGCGTCAGTGTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTGCGTCCAGGGCGCGTTCt < 2:1317707/93‑1 (MQ=255)
gCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCtt > 2:1388910/1‑93 (MQ=255)
gCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCtt < 1:1292289/93‑1 (MQ=255)
gTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGc > 2:4232447/1‑93 (MQ=255)
gTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGc < 1:1162102/93‑1 (MQ=255)
gTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGc < 2:1131401/93‑1 (MQ=255)
tCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCa < 1:1827049/93‑1 (MQ=255)
cAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAg < 1:3404075/93‑1 (MQ=255)
gTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGt > 1:5035912/1‑93 (MQ=255)
tttGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTa > 1:5850843/1‑93 (MQ=255)
tttGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTa < 1:3581732/93‑1 (MQ=255)
tttGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTa > 1:4689509/1‑93 (MQ=255)
tGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgc < 2:3899632/93‑1 (MQ=255)
tGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgc > 1:3682691/1‑93 (MQ=255)
tGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgc < 1:883782/93‑1 (MQ=255)
gCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgct < 1:308379/93‑1 (MQ=255)
ccGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgctgc > 2:2929609/1‑93 (MQ=255)
cGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgctgct > 2:241625/1‑93 (MQ=255)
gTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgctgctgc > 1:5159636/1‑93 (MQ=255)
gTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgctgctgc > 1:5660222/1‑93 (MQ=255)
gTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgctgctgc > 1:4017111/1‑93 (MQ=255)
tGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgctgctgct < 1:1038400/93‑1 (MQ=255)
tGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgctgctgct < 1:1473306/93‑1 (MQ=255)
ggCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAgctgctgct < 1:5293334/92‑1 (MQ=255)
gCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGctgctgctg < 1:1558437/93‑1 (MQ=255)
ccGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTgg < 1:5652949/93‑1 (MQ=255)
cGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGa < 1:5998960/93‑1 (MQ=255)
gggAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGaa < 2:1655743/93‑1 (MQ=255)
gggAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGaa > 1:2668893/1‑93 (MQ=255)
gggAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGaa > 2:3330696/1‑93 (MQ=255)
gggAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGaa > 1:3300401/1‑93 (MQ=255)
gggAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGaa > 2:2612544/1‑93 (MQ=255)
aaGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCGGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACgg < 1:3170016/93‑1 (MQ=255)
aaGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACgg > 1:6421868/1‑93 (MQ=255)
aGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACggg < 1:4788857/93‑1 (MQ=255)
gCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGa > 2:3421744/1‑93 (MQ=255)
gCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGa > 1:6103475/1‑93 (MQ=255)
cGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGaa < 1:1975612/93‑1 (MQ=255)
gTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGaaa > 2:755724/1‑93 (MQ=255)
gTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGaaa > 2:2197025/1‑93 (MQ=255)
gTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGaaa > 1:3965947/1‑93 (MQ=255)
tGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAAc < 2:6262668/93‑1 (MQ=255)
cACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCtt < 2:5564426/93‑1 (MQ=255)
cACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCtt > 2:1025156/1‑93 (MQ=255)
aCCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTc < 2:2065175/93‑1 (MQ=255)
cGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGc < 2:1201305/93‑1 (MQ=255)
cGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGc > 1:348309/1‑93 (MQ=255)
gTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCa > 2:5863737/1‑93 (MQ=255)
gTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCa > 2:5141935/1‑93 (MQ=255)
gTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCa > 2:5247528/1‑93 (MQ=255)
gTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCa < 1:4309346/93‑1 (MQ=255)
gATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTTTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCaaaa < 2:4527036/93‑1 (MQ=255)
aTTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAg < 2:5611758/93‑1 (MQ=255)
ttGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTg < 2:1996341/93‑1 (MQ=255)
tGCTGGAGTAGCTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGa < 2:4584381/93‑1 (MQ=255)
cTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGAtt < 1:3912426/93‑1 (MQ=255)
tGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGACCGGGAAAACTCTTCGCAAAAGTGATTc < 2:3966913/93‑1 (MQ=255)
gAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTcgc < 2:1669865/93‑1 (MQ=255)
gAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACACTTCGCAAAAGTGATTcgc < 1:6291847/93‑1 (MQ=255)
gTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCgcgc > 1:4096869/1‑93 (MQ=255)
tAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCt > 1:4438680/1‑93 (MQ=255)
aaCTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTg > 2:6060520/1‑93 (MQ=255)
aaCTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTg < 2:703708/93‑1 (MQ=255)
aCTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTgg > 2:2458092/1‑93 (MQ=255)
gAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGcaac > 2:4821437/1‑93 (MQ=255)
aaGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGcaaca < 1:2554190/93‑1 (MQ=255)
gCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAAt < 2:5755538/93‑1 (MQ=255)
gCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAAt < 2:1250227/93‑1 (MQ=255)
gCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAAt < 1:952189/93‑1 (MQ=255)
gACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGc < 2:4948249/93‑1 (MQ=255)
gACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGc > 1:6080802/1‑93 (MQ=255)
aCGTCGCGTACGTCCAGGGCGCTTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCt < 1:1093443/93‑1 (MQ=255)
aCGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCt > 1:2947886/1‑93 (MQ=255)
cGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCtt < 1:5759664/93‑1 (MQ=255)
cGTCGCGTACGTCCAGGGCGCGTTCTTGCAGCTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCtt < 2:5096478/93‑1 (MQ=255)
gTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTc < 1:2358326/93‑1 (MQ=255)
tCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCg > 2:5394911/1‑93 (MQ=255)
gcgTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGgc > 1:813095/1‑93 (MQ=255)
cgTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGgcg < 1:1007600/93‑1 (MQ=255)
gTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGgcgc > 1:648759/1‑93 (MQ=255)
tACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCa < 2:3500838/93‑1 (MQ=255)
tCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCtt < 2:2286693/93‑1 (MQ=255)
ccAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTa > 1:5194849/1‑93 (MQ=255)
cAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTaa < 2:1942257/93‑1 (MQ=255)
cAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTaa < 1:4232447/93‑1 (MQ=255)
gggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAACCTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATc < 2:3078649/93‑1 (MQ=255)
gggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATc < 2:5223805/93‑1 (MQ=255)
gggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATc > 1:1601089/1‑93 (MQ=255)
gggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATc < 2:381090/93‑1 (MQ=255)
ggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATcc < 2:5476206/93‑1 (MQ=255)
ggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATcc < 1:4634522/93‑1 (MQ=255)
ggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATcc > 2:3383295/1‑93 (MQ=255)
ggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATcc > 2:4243341/1‑93 (MQ=255)
ggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATcc < 2:4077462/93‑1 (MQ=255)
ggCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATcc > 2:4031461/1‑93 (MQ=255)
|
GGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCACGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGC > NC_000913/4139002‑4139183
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCACGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCG > NC_000913/4139001‑4139184
|
GGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGT > SRR4302534.4436695/1‑94 (MQ=60)
GGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGT > SRR4302534.4466663/1‑94 (MQ=60)
GGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTT < SRR4302534.2880059/94‑1 (MQ=60)
GGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTT < SRR4302534.5483834/94‑1 (MQ=60)
GCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTC < SRR4302534.3892669/94‑1 (MQ=60)
CTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCT < SRR4302534.5454826/94‑1 (MQ=60)
GCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTG < SRR4302534.1326319/94‑1 (MQ=60)
CGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGC < SRR4302534.896049/94‑1 (MQ=60)
GTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCG > SRR4302534.5279606/1‑94 (MQ=60)
GTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCA < SRR4302534.1192597/94‑1 (MQ=60)
TCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAG < SRR4302534.1874575/94‑1 (MQ=60)
CAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGG < SRR4302534.3495484/94‑1 (MQ=60)
AGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGT > SRR4302534.5171929/1‑94 (MQ=60)
GTTTGCCCTGTTCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTA < SRR4302534.6456039/94‑1 (MQ=60)
GTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTA > SRR4302534.3681537/1‑94 (MQ=60)
GTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTA > SRR4302534.4816792/1‑94 (MQ=60)
GTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTA > SRR4302534.6009714/1‑94 (MQ=60)
TTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAG < SRR4302534.3678074/94‑1 (MQ=60)
TTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGC > SRR4302534.3781701/1‑94 (MQ=60)
TGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCT < SRR4302534.5814134/94‑1 (MQ=60)
TGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCT < SRR4302534.906146/94‑1 (MQ=60)
TGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCT < SRR4302534.2517481/94‑1 (MQ=60)
GCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTG < SRR4302534.316347/94‑1 (MQ=60)
GCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTG > SRR4302534.1156615/1‑94 (MQ=60)
CCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGC > SRR4302534.5522553/1‑94 (MQ=60)
CCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGC < SRR4302534.164258/94‑1 (MQ=60)
CCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCT < SRR4302534.936099/94‑1 (MQ=60)
CGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTG < SRR4302534.4806758/94‑1 (MQ=60)
CGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTG > SRR4302534.1903576/1‑94 (MQ=60)
CGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTG > SRR4302534.1499816/1‑94 (MQ=60)
GGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGC > SRR4302534.5298760/1‑94 (MQ=60)
GGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGC > SRR4302534.5813456/1‑94 (MQ=60)
GGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGC > SRR4302534.4124798/1‑94 (MQ=60)
GGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGGAGCTGCTGC < SRR4302534.6477909/94‑1 (MQ=60)
TGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTG < SRR4302534.4190917/94‑1 (MQ=60)
TGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTG < SRR4302534.1065199/94‑1 (MQ=60)
TGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTG < SRR4302534.1512070/94‑1 (MQ=60)
TGCCGGGAAGAGTTGCTCACCGTAGATTTGCTGGAGGAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTG > SRR4302534.4177824/1‑94 (MQ=60)
GGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTG < SRR4302534.5436222/94‑1 (MQ=60)
GCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGG < SRR4302534.1599239/94‑1 (MQ=60)
GCCGGGAAGAGTTGCTCAAAGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCTCGGTCTTGCAGGTAGCTGGTGCGGG < SRR4302534.3019365/94‑1 (MQ=60)
CCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGA < SRR4302534.5805955/94‑1 (MQ=60)
CGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAA < SRR4302534.6161935/94‑1 (MQ=60)
CGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAA > SRR4302534.3388489/1‑94 (MQ=60)
CGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAA > SRR4302534.2739429/1‑94 (MQ=60)
CGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAA < SRR4302534.1051616/94‑1 (MQ=60)
GGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACG < SRR4302534.6031866/94‑1 (MQ=60)
GAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGG > SRR4302534.6595073/1‑94 (MQ=60)
GAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGG < SRR4302534.3463148/94‑1 (MQ=60)
AAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCGGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGG < SRR4302534.3253645/94‑1 (MQ=60)
AAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGG > SRR4302534.6405055/1‑94 (MQ=60)
AGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGA < SRR4302534.5624352/94‑1 (MQ=60)
AGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGA > SRR4302534.6269443/1‑94 (MQ=60)
AGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGA < SRR4302534.4958739/94‑1 (MQ=60)
AGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGA > SRR4302534.4947151/1‑94 (MQ=60)
AGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGA < SRR4302534.4918893/94‑1 (MQ=60)
CGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAA < SRR4302534.2027335/94‑1 (MQ=60)
CGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAA > SRR4302534.4072111/1‑94 (MQ=60)
GTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAA > SRR4302534.1003030/1‑94 (MQ=60)
CTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCT < SRR4302534.1631513/94‑1 (MQ=60)
CTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCT < SRR4302534.6542382/94‑1 (MQ=60)
CTCACCGCAGATTTGCTGGTGTAACTGGAAGCAGTCGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAACTGCTGCTTGAACGGGAAAACTCT > SRR4302534.4664032/1‑94 (MQ=60)
TCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTT > SRR4302534.4049190/1‑94 (MQ=60)
TCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTT < SRR4302534.3454635/94‑1 (MQ=60)
TCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTT > SRR4302534.623351/1‑94 (MQ=60)
CACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTC > SRR4302534.1267845/1‑94 (MQ=60)
ACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCG < SRR4302534.720679/94‑1 (MQ=60)
CCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGC > SRR4302534.357238/1‑94 (MQ=60)
CGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCA > SRR4302534.5929833/1‑94 (MQ=60)
CGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCA < SRR4302534.4263204/94‑1 (MQ=60)
GTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAA < SRR4302534.4426110/94‑1 (MQ=60)
GATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAG < SRR4302534.889070/94‑1 (MQ=60)
ATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGT < SRR4302534.1095587/94‑1 (MQ=60)
TTTGCTGGAGTAACAGGAAGCAGACGTCGCGTGCGTCCAGGGCACGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTG < SRR4302534.6604606/94‑1 (MQ=60)
TTAGCAGGAGTAACGGGAAGCAGGCGTAGCGTACGTCCAGGGCGCGTGCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTG < SRR4302534.4762514/94‑1 (MQ=60)
TTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGA < SRR4302534.5355203/94‑1 (MQ=60)
TGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGAT < SRR4302534.5932710/94‑1 (MQ=60)
TGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGAT < SRR4302534.4411627/94‑1 (MQ=60)
GCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATT < SRR4302534.637600/94‑1 (MQ=60)
GCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATT < SRR4302534.4726631/94‑1 (MQ=60)
CTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTC < SRR4302534.4017331/94‑1 (MQ=60)
TGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCG > SRR4302534.3985030/1‑94 (MQ=60)
GGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGC > SRR4302534.1580101/1‑94 (MQ=60)
GGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGC > SRR4302534.1983110/1‑94 (MQ=60)
GGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGC < SRR4302534.1084425/94‑1 (MQ=60)
GAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACACTTCGCAAAAGTGATTCGCG < SRR4302534.6462066/94‑1 (MQ=60)
AGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGC > SRR4302534.4206996/1‑94 (MQ=60)
GTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCT > SRR4302534.4558578/1‑94 (MQ=60)
TAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTG > SRR4302534.6245708/1‑94 (MQ=60)
TAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTG < SRR4302534.3800037/94‑1 (MQ=60)
TAACTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTG > SRR4302534.909873/1‑94 (MQ=60)
CTGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCA < SRR4302534.367658/94‑1 (MQ=60)
TGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCGAACGTGATTCGCGCTGCCAA > SRR4302534.4846226/1‑94 (MQ=60)
TGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAA > SRR4302534.311557/1‑94 (MQ=60)
TGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAA < SRR4302534.5444084/94‑1 (MQ=60)
TGGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAA > SRR4302534.3828319/1‑94 (MQ=60)
GGAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAAC > SRR4302534.1500503/1‑94 (MQ=60)
GAAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACA < SRR4302534.1717717/94‑1 (MQ=60)
AAGCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAA < SRR4302534.2621893/94‑1 (MQ=60)
GCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATT < SRR4302534.1563264/94‑1 (MQ=60)
GCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATT < SRR4302534.976437/94‑1 (MQ=60)
GCAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATT < SRR4302534.3505951/94‑1 (MQ=60)
CAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTG > SRR4302534.3553396/1‑94 (MQ=60)
CAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTG > SRR4302534.2199134/1‑94 (MQ=60)
CAGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTG < SRR4302534.5904486/94‑1 (MQ=60)
AGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGC > SRR4302534.2688590/1‑94 (MQ=60)
AGACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGC > SRR4302534.6246181/1‑94 (MQ=60)
GACGTCGCGTACGTCCAGGGCGGGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCT < SRR4302534.5372253/94‑1 (MQ=60)
GACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAATCTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCT < SRR4302534.1168098/94‑1 (MQ=60)
GACGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCT > SRR4302534.3025223/1‑94 (MQ=60)
gcgtcgcgacCGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTAGAACGGGACAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATAGCTT < SRR4302534.6647492/84‑1 (MQ=60)
ACGTCGCGTACGTCCAGGGCGCTTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTT < SRR4302534.1121889/94‑1 (MQ=60)
CGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTC < SRR4302534.6147277/94‑1 (MQ=60)
CGTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTC < SRR4302534.5915895/94‑1 (MQ=60)
GTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCG < SRR4302534.69038/94‑1 (MQ=60)
GTCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCG < SRR4302534.2420923/94‑1 (MQ=60)
TCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGG < SRR4302534.3185544/94‑1 (MQ=60)
TCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGG < SRR4302534.2921248/94‑1 (MQ=60)
TCGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGG < SRR4302534.3302227/94‑1 (MQ=60)
GGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGC > SRR4302534.833528/1‑94 (MQ=60)
CGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGC < SRR4302534.4402230/94‑1 (MQ=60)
CGCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGC > SRR4302534.4087308/1‑94 (MQ=60)
GCGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCG < SRR4302534.5284671/94‑1 (MQ=60)
CGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGC > SRR4302534.664490/1‑94 (MQ=60)
CGTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGC < SRR4302534.1033462/94‑1 (MQ=60)
GTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTTGCAACAATTGCTTCGGCGCA > SRR4302534.4613032/1‑94 (MQ=60)
GTACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCA < SRR4302534.5315348/94‑1 (MQ=60)
TACGTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAG > SRR4302534.2412981/1‑94 (MQ=60)
GTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTT > SRR4302534.2761313/1‑94 (MQ=60)
GTCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTT < SRR4302534.3359477/94‑1 (MQ=60)
TCCAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTA > SRR4302534.5334937/1‑94 (MQ=60)
CAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAAT < SRR4302534.3941138/94‑1 (MQ=60)
CAGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAAT < SRR4302534.4346523/94‑1 (MQ=60)
AGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATC > SRR4302534.5809201/1‑94 (MQ=60)
AGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATC > SRR4302534.1642917/1‑94 (MQ=60)
AGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATC > SRR4302534.2825392/1‑94 (MQ=60)
AGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATC > SRR4302534.3081487/1‑94 (MQ=60)
AGGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATC < SRR4302534.4912041/94‑1 (MQ=60)
GGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCC < SRR4302534.4124213/94‑1 (MQ=60)
GGGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCC > SRR4302534.2553302/1‑94 (MQ=60)
GGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCG > SRR4302534.66306/1‑94 (MQ=60)
GGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCG < SRR4302534.4760283/94‑1 (MQ=60)
GGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCG < SRR4302534.3676037/94‑1 (MQ=60)
GGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCG < SRR4302534.6267860/94‑1 (MQ=60)
GGCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGCGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATACG > SRR4302534.5604512/1‑94 (MQ=60)
GCGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGG > SRR4302534.4661418/1‑94 (MQ=60)
CGCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGC > SRR4302534.4950593/1‑94 (MQ=60)
GCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCG < SRR4302534.578477/94‑1 (MQ=60)
GCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCG < SRR4302534.613486/94‑1 (MQ=60)
GCGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCG > SRR4302534.151966/1‑94 (MQ=60)
|
GGGCTGCGTCAGTTTGCCCGGTGCCGGGAAGCGTTGCTCACCGTAGATTTGCTGGAGTAACTGGAAGCAGACGTCGCGTACGTCCAGGGCACGTTCTTGCAGGTAGCTGCTGCTGGAACGGGAAAACTCTTCGCAAAAGTGATTCGCGCTGGCAACAATTGCTTCGGCGCAGCTTAATCCGGCG > NC_000913/4139001‑4139184
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
