Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,155,035 |
A→G |
T203A (ACG→GCG) |
argH → |
argininosuccinate lyase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,155,035 | 0 | A | G | 99.6%
| 785.4
/ ‑4.6
| 233 | T203A (ACG→GCG) | argH | argininosuccinate lyase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (96/136); total (96/137) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.43e-01 |
Only 100 of 242 total aligned reads displayed.
TTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGT > NC_000913/4154946‑4155124
|
ttGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCgg > 1:1057584/1‑93 (MQ=255)
gagaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGcc < 1:5650435/93‑1 (MQ=255)
gagaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGcc < 1:4699185/93‑1 (MQ=255)
agaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCt < 1:3657898/93‑1 (MQ=255)
gaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTa < 2:6277598/93‑1 (MQ=255)
gaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTa > 2:3519602/1‑93 (MQ=255)
gaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTa < 1:1536428/93‑1 (MQ=255)
gaTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTa < 1:5032988/93‑1 (MQ=255)
aTGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTAt < 2:5916536/93‑1 (MQ=255)
tGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATg > 1:2688079/1‑93 (MQ=255)
gCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGa > 1:1687541/1‑93 (MQ=255)
tGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGaaa > 1:4787818/1‑93 (MQ=255)
tGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGaaa < 1:183993/93‑1 (MQ=255)
tGGCGCGTCATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGaaa < 1:5827632/93‑1 (MQ=255)
ggCGCGTGATGAAAGCGGTTTGCAGGATTCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAt < 1:5051839/93‑1 (MQ=255)
ggCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAt > 2:1603811/1‑93 (MQ=255)
ggCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAt > 1:787514/1‑93 (MQ=255)
ggCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAt < 1:2557117/93‑1 (MQ=255)
cgcgTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCg > 2:4509174/1‑93 (MQ=255)
cgTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGAc < 2:1200087/93‑1 (MQ=255)
gTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGAcc > 2:5870938/1‑93 (MQ=255)
gTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGAcc < 1:5377433/93‑1 (MQ=255)
tgatgaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCg > 2:1171291/1‑93 (MQ=255)
tgatgaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCg < 1:5857420/93‑1 (MQ=255)
tgatgaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCg > 1:3757888/1‑93 (MQ=255)
gaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCTACCGTGaa > 2:2541354/1‑93 (MQ=255)
gaAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGaa > 1:3973203/1‑93 (MQ=255)
aGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAg < 1:3994851/93‑1 (MQ=255)
aGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAg < 1:4956753/93‑1 (MQ=255)
gCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGt > 1:1870980/1‑93 (MQ=255)
cGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTa < 2:3956115/93‑1 (MQ=255)
gTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAg < 1:5572087/93‑1 (MQ=255)
tttGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGCACAGTTAGc > 2:4065900/1‑93 (MQ=255)
ttGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCa < 1:2655147/93‑1 (MQ=255)
ttGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCa < 1:5514436/93‑1 (MQ=255)
tGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAg > 2:5033389/1‑93 (MQ=255)
gCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAgg > 1:4488836/1‑93 (MQ=255)
cAGGATGCGCTTAAGCGTCTGGATGTCAGCCGGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggc < 1:2388968/93‑1 (MQ=255)
cAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggc < 1:6423101/93‑1 (MQ=255)
cAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggc < 1:4963440/93‑1 (MQ=255)
cAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggc < 1:2010718/93‑1 (MQ=255)
aGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggct > 2:3320652/1‑93 (MQ=255)
gATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggctgg > 2:2017500/1‑93 (MQ=255)
aTGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggctggc > 2:2135616/1‑93 (MQ=255)
aTGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAggctggc < 2:1369664/93‑1 (MQ=255)
cgcTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGctggctgg < 1:435253/93‑1 (MQ=255)
cgcTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGctggctgg < 1:1257675/93‑1 (MQ=255)
ttAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCt > 2:1873763/1‑93 (MQ=255)
ttAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCt < 1:999098/93‑1 (MQ=255)
tAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCtt > 1:3440564/1‑93 (MQ=255)
tAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCtt < 2:3890941/93‑1 (MQ=255)
aaGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCttt > 1:4824711/1‑93 (MQ=255)
aGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTg > 1:2185157/1‑93 (MQ=255)
aGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTg > 1:4327773/1‑93 (MQ=255)
gCGTCTGGTTGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGGGCGGCCTATGAAATCCACCGTGAACAGATAGCAGGCTGGCTTGGCTTTGc > 1:6318764/1‑93 (MQ=255)
gCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGc < 1:3259866/93‑1 (MQ=255)
cGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCt > 1:965110/1‑93 (MQ=255)
tCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTc < 1:1437256/93‑1 (MQ=255)
cTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCg < 1:5716105/93‑1 (MQ=255)
cTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCg < 2:4128902/93‑1 (MQ=255)
tGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCgg > 2:3802212/1‑93 (MQ=255)
ggATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGCACAGTTAGCAGGCCGGCTGGGCTTTGCTTCggg > 2:4377181/1‑92 (MQ=255)
ggATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGc < 2:4887867/93‑1 (MQ=255)
ggATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGc < 1:4086217/93‑1 (MQ=255)
ggATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGc < 2:248227/93‑1 (MQ=255)
gATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCcgcg > 1:1044527/1‑93 (MQ=255)
tGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGAc > 1:1114171/1‑93 (MQ=255)
tCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGGTTTGCTTCGGCGAccc > 1:3524601/1‑93 (MQ=255)
gCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTa > 1:3600937/1‑93 (MQ=255)
gCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTa < 2:4915735/93‑1 (MQ=255)
gCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTa > 2:365388/1‑93 (MQ=255)
cGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACa < 2:531858/93‑1 (MQ=255)
cTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGt > 2:5388401/1‑93 (MQ=255)
cTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGt > 2:5092536/1‑93 (MQ=255)
tAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtc < 2:765170/93‑1 (MQ=255)
tAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtc > 1:700409/1‑93 (MQ=255)
tAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtc < 1:3942576/93‑1 (MQ=255)
tAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtc < 2:2185557/93‑1 (MQ=255)
aGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtct > 2:2402040/1‑93 (MQ=255)
aGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtct < 1:4509174/93‑1 (MQ=255)
aGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtct < 2:2685350/93‑1 (MQ=255)
ggCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtctc > 1:1281973/1‑93 (MQ=255)
ggCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGtctc > 1:3371589/1‑93 (MQ=255)
ggCTGTGGCGCGCTGGCGGGAGCGGACTATGAAATCGAGCGTGAACAGTTAGCAGGCTGGGTGGGCTTTGCTTCGGCGACCCGTAACAGcctt > 2:4762407/1‑92 (MQ=255)
cTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGa < 1:2950126/93‑1 (MQ=255)
tgtgGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAc < 1:929428/93‑1 (MQ=255)
gtgGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACa < 1:4238962/93‑1 (MQ=255)
tgGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAg < 1:3132988/93‑1 (MQ=255)
ggCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGGACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGc > 2:2380527/1‑93 (MQ=255)
ggCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGc > 2:3239242/1‑93 (MQ=255)
ggCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGc < 2:2803354/93‑1 (MQ=255)
gcgcgcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCg > 2:222911/1‑93 (MQ=255)
cgcgcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGt < 2:5570138/93‑1 (MQ=255)
gcgcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGtt < 1:2050140/93‑1 (MQ=255)
gcTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTc < 2:2842140/93‑1 (MQ=255)
gtgggAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGAc < 1:3024927/91‑1 (MQ=255)
gCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGAc < 2:3170233/93‑1 (MQ=255)
cGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGAcc > 2:341155/1‑93 (MQ=255)
gggAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCg > 2:1724629/1‑93 (MQ=255)
ggAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCTTAACAGTCTCGACAGCGTTTCTGACCGt < 1:657552/93‑1 (MQ=255)
|
TTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGT > NC_000913/4154946‑4155124
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGACC > NC_000913/4154942‑4155128
|
TATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAG < SRR4302534.5430738/94‑1 (MQ=60)
TGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCG < SRR4302534.3268390/94‑1 (MQ=60)
GTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGG > SRR4302534.1084977/1‑94 (MQ=60)
GTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGG > SRR4302534.2091128/1‑94 (MQ=60)
TGAGATGATGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTCGGCTCTGGCCCGCTGGCGGGAGCGGCC > SRR4302534.5680756/1‑94 (MQ=60)
GAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCT < SRR4302534.5803383/94‑1 (MQ=60)
GAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCT < SRR4302534.4826746/94‑1 (MQ=60)
GAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCT < SRR4302534.1649999/94‑1 (MQ=60)
AGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTA > SRR4302534.1855278/1‑94 (MQ=60)
AGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTA > SRR4302534.4084566/1‑94 (MQ=60)
AGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTA < SRR4302534.3756209/94‑1 (MQ=60)
GATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTAT < SRR4302534.5168938/94‑1 (MQ=60)
GATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTAT < SRR4302534.4961834/94‑1 (MQ=60)
GATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTAT > SRR4302534.338562/1‑94 (MQ=60)
GATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTAT < SRR4302534.1576723/94‑1 (MQ=60)
GATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTAT < SRR4302534.2866779/94‑1 (MQ=60)
ATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATG > SRR4302534.2759123/1‑94 (MQ=60)
TGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGA > SRR4302534.1731423/1‑94 (MQ=60)
GCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAA < SRR4302534.4546926/94‑1 (MQ=60)
CTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAA > SRR4302534.4917836/1‑94 (MQ=60)
TGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAT < SRR4302534.4895174/94‑1 (MQ=60)
TGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAT > SRR4302534.807234/1‑94 (MQ=60)
TGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAT < SRR4302534.188838/94‑1 (MQ=60)
TGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAT > SRR4302534.4765287/1‑94 (MQ=60)
TGGCGCGTCATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAT < SRR4302534.5985809/94‑1 (MQ=60)
GGCGCGTGATGAAAGCGGTTTGCAGGATTCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATC < SRR4302534.5188267/94‑1 (MQ=60)
GGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATC < SRR4302534.2624896/94‑1 (MQ=60)
GCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCG < SRR4302534.691256/94‑1 (MQ=60)
GCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGAC < SRR4302534.6154993/94‑1 (MQ=60)
CGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACC < SRR4302534.2961780/94‑1 (MQ=60)
GTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCG < SRR4302534.20260/94‑1 (MQ=60)
GTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCG < SRR4302534.1292457/94‑1 (MQ=60)
GTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCG > SRR4302534.3858793/1‑94 (MQ=60)
GTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCG < SRR4302534.5522321/94‑1 (MQ=60)
TGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGT < SRR4302534.3915844/94‑1 (MQ=60)
TGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGT < SRR4302534.6016455/94‑1 (MQ=60)
GATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTG > SRR4302534.2163178/1‑94 (MQ=60)
GATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTG < SRR4302534.752795/94‑1 (MQ=60)
GATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTG < SRR4302534.6347996/94‑1 (MQ=60)
ATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGA < SRR4302534.4368050/94‑1 (MQ=60)
ATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGA < SRR4302534.2232228/94‑1 (MQ=60)
TGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAA > SRR4302534.4079547/1‑94 (MQ=60)
GAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAAC > SRR4302534.88324/1‑94 (MQ=60)
AAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACA < SRR4302534.3623829/94‑1 (MQ=60)
AAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTTAACAG > SRR4302534.3493707/1‑94 (MQ=60)
AAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAG > SRR4302534.877379/1‑94 (MQ=60)
AGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGT < SRR4302534.4101793/94‑1 (MQ=60)
AGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGT < SRR4302534.5090991/94‑1 (MQ=60)
AGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGT > SRR4302534.1919663/1‑94 (MQ=60)
AGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGT < SRR4302534.2752936/94‑1 (MQ=60)
GCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTT < SRR4302534.5141513/94‑1 (MQ=60)
CCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTA < SRR4302534.677951/94‑1 (MQ=60)
CGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAG < SRR4302534.3674619/94‑1 (MQ=60)
CGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAG < SRR4302534.5948839/94‑1 (MQ=60)
CGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAG < SRR4302534.4208844/94‑1 (MQ=60)
GTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGC < SRR4302534.5722557/94‑1 (MQ=60)
TTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCA < SRR4302534.4144594/94‑1 (MQ=60)
TTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAG < SRR4302534.1907735/94‑1 (MQ=60)
TTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAG < SRR4302534.5093557/94‑1 (MQ=60)
TTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAG < SRR4302534.5663201/94‑1 (MQ=60)
TTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAG < SRR4302534.2725357/94‑1 (MQ=60)
TGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGG > SRR4302534.4610305/1‑94 (MQ=60)
GCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCAGCCTATGAAATCGACCGTGAACAGTTAGCAGGC > SRR4302534.5996995/1‑94 (MQ=60)
CAGGATGCGCTTAAGCGTCTGGATGTCAGCCGGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCT < SRR4302534.2452448/94‑1 (MQ=60)
CAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCT < SRR4302534.5097815/94‑1 (MQ=60)
CAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCT < SRR4302534.2063323/94‑1 (MQ=60)
CAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCT < SRR4302534.6596331/94‑1 (MQ=60)
AGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTG > SRR4302534.471506/1‑94 (MQ=60)
AGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTG < SRR4302534.4202445/94‑1 (MQ=60)
GGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCCATGAAATCGACCGGGAACAGATAGCAGGCTGG > SRR4302534.520013/1‑94 (MQ=60)
GATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGC > SRR4302534.1508227/1‑94 (MQ=60)
GATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGC > SRR4302534.4625471/1‑94 (MQ=60)
ATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCT < SRR4302534.5775204/94‑1 (MQ=60)
CGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGG < SRR4302534.446350/94‑1 (MQ=60)
CGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGG > SRR4302534.3070588/1‑94 (MQ=60)
CGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGG < SRR4302534.1290813/94‑1 (MQ=60)
CTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGTCGGGTGCGGCCTATGAAAGCGACCGTGAACAGATAGCACGCTGGCTGGGGT > SRR4302534.334559/1‑94 (MQ=60)
TTAAGCGTGTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTT > SRR4302534.3545655/1‑94 (MQ=60)
TTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTT > SRR4302534.3533039/1‑94 (MQ=60)
TTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTT < SRR4302534.1024700/94‑1 (MQ=60)
TAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTT > SRR4302534.4955647/1‑94 (MQ=60)
TAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTT < SRR4302534.2666399/94‑1 (MQ=60)
AAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTG > SRR4302534.2242930/1‑94 (MQ=60)
AAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTG > SRR4302534.4444839/1‑94 (MQ=60)
AGCGTCTGGTTGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGGGCGGCCTATGAAATCCACCGTGAACAGATAGCAGGCTGGCTTGGCTTTGC > SRR4302534.6489531/1‑94 (MQ=60)
AGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGC < SRR4302534.3786796/94‑1 (MQ=60)
AGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGC > SRR4302534.1402766/1‑94 (MQ=60)
AGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGC > SRR4302534.965386/1‑94 (MQ=60)
GCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCT > SRR4302534.989706/1‑94 (MQ=60)
GCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCT < SRR4302534.3346671/94‑1 (MQ=60)
CGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTT > SRR4302534.1229418/1‑94 (MQ=60)
CGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTT > SRR4302534.3954688/1‑94 (MQ=60)
CGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTT > SRR4302534.2359277/1‑94 (MQ=60)
TCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCTACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG < SRR4302534.5172660/94‑1 (MQ=60)
TCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG < SRR4302534.4931335/94‑1 (MQ=60)
TCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG > SRR4302534.1072549/1‑94 (MQ=60)
TCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG < SRR4302534.1475088/94‑1 (MQ=60)
TCGGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCG < SRR4302534.3244305/94‑1 (MQ=60)
CTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGG < SRR4302534.5870975/94‑1 (MQ=60)
TGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGC > SRR4302534.1948258/1‑94 (MQ=60)
TGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCGGGGGTTTGCGTCGGC > SRR4302534.1136304/1‑94 (MQ=60)
GGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCG < SRR4302534.569552/94‑1 (MQ=60)
GGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCG < SRR4302534.4195941/94‑1 (MQ=60)
GGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCCGCG > SRR4302534.1071509/1‑94 (MQ=60)
ATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGAC > SRR4302534.1143262/1‑94 (MQ=60)
GTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGGTTTGCTTCGGCGACCC > SRR4302534.3619401/1‑94 (MQ=60)
GTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCGATGAAATCGACCGTTAACAGTTAGCAGGCGGGCGGGGCCTTCCTTCGGCGACCC > SRR4302534.264975/1‑94 (MQ=60)
TCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCG < SRR4302534.5558022/94‑1 (MQ=60)
CAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGT > SRR4302534.4099663/1‑94 (MQ=60)
AGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTA > SRR4302534.3697777/1‑94 (MQ=60)
AGCCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAAGCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTA < SRR4302534.6548633/94‑1 (MQ=60)
CCCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGGGACCCGTAca > SRR4302534.1741527/1‑92 (MQ=60)
CCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACA < SRR4302534.3297069/94‑1 (MQ=60)
CCGCTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCGTTGCTTCGGCGACCCGTAACA > SRR4302534.5104353/1‑94 (MQ=60)
CTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTTACAGTC > SRR4302534.350849/1‑94 (MQ=60)
CTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTC < SRR4302534.6602399/94‑1 (MQ=60)
CTAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTC > SRR4302534.717568/1‑94 (MQ=60)
TAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCT < SRR4302534.4048157/94‑1 (MQ=60)
TAGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCT < SRR4302534.4048156/94‑1 (MQ=60)
AGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTC > SRR4302534.3461926/1‑94 (MQ=60)
AGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTC < SRR4302534.4631282/94‑1 (MQ=60)
AGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTC > SRR4302534.5774540/1‑94 (MQ=60)
AGGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTC > SRR4302534.1315717/1‑94 (MQ=60)
GGCTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCG > SRR4302534.5922893/1‑94 (MQ=60)
CTGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAC < SRR4302534.3027503/94‑1 (MQ=60)
TGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACA > SRR4302534.5508713/1‑94 (MQ=60)
TGTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACA < SRR4302534.953079/94‑1 (MQ=60)
GTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAG < SRR4302534.4353249/94‑1 (MQ=60)
GTGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAG > SRR4302534.5835759/1‑94 (MQ=60)
TGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGC < SRR4302534.3215341/94‑1 (MQ=60)
TGGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGC < SRR4302534.3711468/94‑1 (MQ=60)
GGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCG < SRR4302534.4500757/94‑1 (MQ=60)
GGCGCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGAAAGCG > SRR4302534.2525029/1‑94 (MQ=60)
GCGCTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTT < SRR4302534.2103714/94‑1 (MQ=60)
GCGCTGGCGGGAGCGGCATATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCTACAGCGTTT > SRR4302534.4456458/1‑94 (MQ=60)
CTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTG > SRR4302534.2666211/1‑94 (MQ=60)
CTGGCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTG > SRR4302534.4958167/1‑94 (MQ=60)
GTGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACC < SRR4302534.3104209/94‑1 (MQ=60)
GCGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACC < SRR4302534.5198737/94‑1 (MQ=60)
GGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCG < SRR4302534.313437/94‑1 (MQ=60)
CGGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGC‑TTGCTTCGGCGGCCCCTAACAGGCTCGGCAGCGgttttgaaccg > SRR4302534.1402677/1‑83 (MQ=60)
GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGT > SRR4302534.1218709/1‑94 (MQ=60)
GGGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGT > SRR4302534.1007304/1‑94 (MQ=60)
GGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCTTAACAGTCTCGACAGCGTTTCTGACCGTG < SRR4302534.673559/94‑1 (MQ=60)
GGAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTG > SRR4302534.2918712/1‑94 (MQ=60)
GAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGA > SRR4302534.6346078/1‑94 (MQ=60)
GAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGA > SRR4302534.2196984/1‑94 (MQ=60)
GAGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGA > SRR4302534.3013161/1‑94 (MQ=60)
AGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGAC < SRR4302534.1946919/94‑1 (MQ=60)
AGCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGAC > SRR4302534.2563151/1‑94 (MQ=60)
GCGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGACC < SRR4302534.5273996/94‑1 (MQ=60)
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TATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGACC > NC_000913/4154942‑4155128
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
