Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,263,561 |
T→C |
R67R (CGT→CGC) |
alr → |
alanine racemase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,263,561 | 0 | T | C | 100.0%
| 802.7
/ NA
| 231 | R67R (CGT→CGC) | alr | alanine racemase 1 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (105/126); total (105/126) |
Only 100 of 245 total aligned reads displayed.
TTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGTGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCATAC > NC_000913/4263471‑4263650
|
ttATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACtgcgcgc > 2:2929525/1‑93 (MQ=255)
ttATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACtgcgcgc > 2:136589/1‑93 (MQ=255)
aTGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCgg < 2:697601/93‑1 (MQ=255)
aTGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCgg < 2:6468069/93‑1 (MQ=255)
aTGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCgg < 1:1287895/93‑1 (MQ=255)
aTGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCgg > 1:831785/1‑93 (MQ=255)
tGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCggg > 2:477410/1‑93 (MQ=255)
tGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCggg > 1:3277002/1‑93 (MQ=255)
tGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCACCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCggg > 1:2896575/1‑93 (MQ=255)
ggTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCgggg < 1:62229/93‑1 (MQ=255)
cACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGa < 2:888396/93‑1 (MQ=255)
cACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGa < 1:3805267/93‑1 (MQ=255)
cACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGa < 1:297764/93‑1 (MQ=255)
ggTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATc > 1:6301228/1‑93 (MQ=255)
ggTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATc < 2:5823574/93‑1 (MQ=255)
cttcttGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCAcc > 2:2606828/1‑93 (MQ=255)
cttcttGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCAcc < 2:2915618/93‑1 (MQ=255)
ttcttGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCa > 1:1086984/1‑93 (MQ=255)
ttcttGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCa < 1:1110952/93‑1 (MQ=255)
ttcttGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCa > 1:1850157/1‑93 (MQ=255)
ttcttGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCa > 1:442172/1‑93 (MQ=255)
tcttGATACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCaa < 2:1581068/93‑1 (MQ=255)
tcttGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCaa > 1:62820/1‑93 (MQ=255)
cttGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCaaa > 1:5475444/1‑93 (MQ=255)
tGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAAcc < 2:2327577/93‑1 (MQ=255)
gagaCCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCt < 2:5899805/93‑1 (MQ=255)
gagaCCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCt < 1:5624813/93‑1 (MQ=255)
agaCCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTg < 1:586015/93‑1 (MQ=255)
agaCCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTg > 2:4040093/1‑93 (MQ=255)
gaCCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGt < 1:6459477/93‑1 (MQ=255)
gccGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTa < 1:5991793/92‑1 (MQ=255)
ccGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTAc < 1:4939752/93‑1 (MQ=255)
cgcgcgAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACt > 2:3385760/1‑93 (MQ=255)
gcgcgACCTCTCCCCGATGCTGACGCGTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGAGCGCGGGGGGAATCACCAAACCTGTACTg < 2:1497103/93‑1 (MQ=255)
gcgcgAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTg > 2:5010083/1‑93 (MQ=255)
gcgcgAACGCTCCCCGACGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTg > 1:5223442/1‑93 (MQ=255)
gcgAACGCTCCCCGATGCTGACGCTTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGtt < 2:3721030/93‑1 (MQ=255)
gcgAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGtt < 1:3974047/93‑1 (MQ=255)
gcgAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGtt < 2:4560530/93‑1 (MQ=255)
cgAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTa < 1:2337427/93‑1 (MQ=255)
gAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTAc < 1:2198740/93‑1 (MQ=255)
gAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTAc < 1:3683702/93‑1 (MQ=255)
aaCGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACt > 1:469961/1‑93 (MQ=255)
aaCGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACt < 2:5243806/93‑1 (MQ=255)
aCGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTc < 2:320915/93‑1 (MQ=255)
cGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCg < 2:6052965/93‑1 (MQ=255)
gCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGa > 2:3823777/1‑93 (MQ=255)
gCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGa > 1:4358441/1‑93 (MQ=255)
cTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGaa > 2:3657226/1‑93 (MQ=255)
ccccGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGCATCACCAAACCTGTACTGTTACTCGAAgg > 2:5044462/1‑93 (MQ=255)
ccccGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACTAAACCTGTACTGTTACTCGAAgg > 1:1675534/1‑93 (MQ=255)
cccGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGc < 1:2034780/93‑1 (MQ=255)
cccGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGc < 1:3195632/93‑1 (MQ=255)
ccGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCt < 1:4910781/93‑1 (MQ=255)
aTGCTGACGCGTTTGTCGTAGTCCGTGTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAGCCTGTACTGTTACTCGAAGGCtttt < 2:1160730/93‑1 (MQ=255)
aTGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCtttt < 1:2682624/93‑1 (MQ=255)
aTGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCtttt > 1:2422790/1‑93 (MQ=255)
tGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCttttt < 2:1728467/93‑1 (MQ=255)
tGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGa < 2:2837036/93‑1 (MQ=255)
tGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGa < 2:2995959/93‑1 (MQ=255)
tGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGa < 2:5208187/93‑1 (MQ=255)
gACGCCTTCGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGAt < 2:1069525/93‑1 (MQ=255)
ccTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCa > 2:5334328/1‑93 (MQ=255)
tttGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCaga > 1:952905/1‑93 (MQ=255)
tttGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCaga > 2:120796/1‑93 (MQ=255)
tttGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCaga < 1:5797913/93‑1 (MQ=255)
ttGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCagag < 1:3384112/93‑1 (MQ=255)
ttGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCagag < 1:4243140/93‑1 (MQ=255)
ttGGCGTAGCCCGTCGCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCagcg < 1:5119405/93‑3 (MQ=255)
gCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATc < 1:5962433/93‑1 (MQ=255)
cGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCt < 2:2058889/93‑1 (MQ=255)
gTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTg > 1:4062898/1‑93 (MQ=255)
tAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGc < 1:3044201/93‑1 (MQ=255)
tAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGc < 2:4377680/93‑1 (MQ=255)
aGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGcc < 1:1485001/93‑1 (MQ=255)
gCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCcg > 1:5367384/1‑93 (MQ=255)
gCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCcg < 1:5371109/93‑1 (MQ=255)
ccGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCcgac > 1:2879660/1‑93 (MQ=255)
gTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCcgacga < 2:4093194/93‑1 (MQ=255)
gTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGAAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCcgacga < 1:1007424/93‑1 (MQ=255)
tctcGAAGAAGCTCTGCGACTGCGCGCGGTGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAt < 2:2528235/93‑1 (MQ=255)
tctcGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAt < 1:3829422/93‑1 (MQ=255)
tctcGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAt > 1:3218608/1‑93 (MQ=255)
ctcGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAtt < 2:3592325/93‑1 (MQ=255)
ctcGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAtt < 1:6174298/93‑1 (MQ=255)
ctcGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAtt < 2:594564/93‑1 (MQ=255)
tcGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAttt < 1:2224623/93‑1 (MQ=255)
gaagaaGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCt < 2:855139/93‑1 (MQ=255)
aagaagCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTg < 2:2879121/93‑1 (MQ=255)
agaagCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTgc < 1:5575790/93‑1 (MQ=255)
gaagCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTgcg > 1:2744594/1‑93 (MQ=255)
aagCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTgcgc < 1:2543472/93‑1 (MQ=255)
aagCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTgcgc > 2:1820304/1‑93 (MQ=255)
gCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCaa > 2:2147764/1‑93 (MQ=255)
ctGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTTCCGACGATTTCTGCGCAACAt > 1:4820036/1‑93 (MQ=255)
ctGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACAt < 1:857183/93‑1 (MQ=255)
tGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACAtt > 1:1352195/1‑93 (MQ=255)
gACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTc > 2:5614539/1‑93 (MQ=255)
gACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTc > 1:450093/1‑93 (MQ=255)
aCTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCa > 1:3910481/1‑93 (MQ=255)
|
TTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGTGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCATAC > NC_000913/4263471‑4263650
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGTGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCATAC > NC_000913/4263468‑4263650
|
CGCTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGC < SRR4302534.1008633/94‑1 (MQ=60)
CGCTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGC < SRR4302534.1135568/94‑1 (MQ=60)
GCTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCG < SRR4302534.2139802/94‑1 (MQ=60)
GCTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCG < SRR4302534.6594872/94‑1 (MQ=60)
CTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGC < SRR4302534.3722037/94‑1 (MQ=60)
CTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGC < SRR4302534.2769115/94‑1 (MQ=60)
CTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGC < SRR4302534.835468/94‑1 (MQ=60)
TTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCG > SRR4302534.3383099/1‑94 (MQ=60)
TATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGG > SRR4302534.2954686/1‑94 (MQ=60)
TATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGG > SRR4302534.852704/1‑94 (MQ=60)
ATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGG < SRR4302534.1321812/94‑1 (MQ=60)
ATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGG > SRR4302534.3372/1‑94 (MQ=60)
ATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGG > SRR4302534.3364339/1‑94 (MQ=60)
ATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCACCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGG > SRR4302534.2972610/1‑94 (MQ=60)
TGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGG < SRR4302534.5062477/94‑1 (MQ=60)
TGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGG > SRR4302534.5374020/1‑94 (MQ=60)
TGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGG < SRR4302534.4783916/94‑1 (MQ=60)
GGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCGTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGG < SRR4302534.1062664/94‑1 (MQ=60)
GGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGG < SRR4302534.63927/94‑1 (MQ=60)
TCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGA < SRR4302534.879565/94‑1 (MQ=60)
TCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGA < SRR4302534.6100525/94‑1 (MQ=60)
TCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGA > SRR4302534.2342317/1‑94 (MQ=60)
TCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGA > SRR4302534.4981539/1‑94 (MQ=60)
CACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAA < SRR4302534.3907439/94‑1 (MQ=60)
CACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAA < SRR4302534.305463/94‑1 (MQ=60)
ACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAAT > SRR4302534.2768941/1‑94 (MQ=60)
CGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATC > SRR4302534.6471636/1‑94 (MQ=60)
GGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAATATCTGCCACTGCGCGCGGGGGGGATCA > SRR4302534.5662045/1‑94 (MQ=60)
GGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCA < SRR4302534.4405706/94‑1 (MQ=60)
GTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGGGTAGACCGGCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAcacgc > SRR4302534.5659975/1‑89 (MQ=60)
GTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCAC > SRR4302534.180874/1‑94 (MQ=60)
GTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCAC > SRR4302534.3078640/1‑94 (MQ=60)
CTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCA > SRR4302534.1115257/1‑94 (MQ=60)
CTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCA > SRR4302534.6099315/1‑94 (MQ=60)
CTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCA > SRR4302534.453405/1‑94 (MQ=60)
CTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCA > SRR4302534.1898291/1‑94 (MQ=60)
TTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAA > SRR4302534.64531/1‑94 (MQ=60)
TTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAA < SRR4302534.1139935/94‑1 (MQ=60)
TCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAA > SRR4302534.5623080/1‑94 (MQ=60)
TTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCGGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACC < SRR4302534.2178836/94‑1 (MQ=60)
GAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTG < SRR4302534.5777036/94‑1 (MQ=60)
AGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGT < SRR4302534.600330/94‑1 (MQ=60)
AGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGT < SRR4302534.678275/94‑1 (MQ=60)
GACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTA > SRR4302534.5727797/1‑94 (MQ=60)
GACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTA < SRR4302534.6633482/94‑1 (MQ=60)
GCCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTAC < SRR4302534.6154567/94‑1 (MQ=60)
CCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACT < SRR4302534.5073598/94‑1 (MQ=60)
CCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACA < SRR4302534.353016/94‑1 (MQ=60)
CGCGCGAACTCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTG > SRR4302534.6453659/1‑94 (MQ=60)
CGCGCGAACGCTCCCCGACGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTG > SRR4302534.5364436/1‑94 (MQ=60)
GCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGT > SRR4302534.613567/1‑94 (MQ=60)
GCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTA < SRR4302534.4080413/94‑1 (MQ=60)
CGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTAC > SRR4302534.4081668/1‑94 (MQ=60)
CGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTAC < SRR4302534.2399456/94‑1 (MQ=60)
GAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACT < SRR4302534.2256921/94‑1 (MQ=60)
GAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACT > SRR4302534.4476910/1‑94 (MQ=60)
GAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACT > SRR4302534.481799/1‑94 (MQ=60)
GAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACT < SRR4302534.3782744/94‑1 (MQ=60)
AACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGCAGCCCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACCC > SRR4302534.908111/1‑94 (MQ=60)
AACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTC > SRR4302534.5515467/1‑94 (MQ=60)
ACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCCGGGGGAATCACCAAACCTGTACTGTTACTCG > SRR4302534.1392987/1‑94 (MQ=60)
CGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGA > SRR4302534.4476036/1‑94 (MQ=60)
GCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAA > SRR4302534.295112/1‑94 (MQ=60)
GCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGATCTGCGACTGCGCGCCGGGGGCATCACCAAACCTGTACTGTTACTCGAA > SRR4302534.3240817/1‑94 (MQ=60)
CTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAG < SRR4302534.861623/94‑1 (MQ=60)
CTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAG < SRR4302534.3139163/94‑1 (MQ=60)
CTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAG < SRR4302534.6349898/94‑1 (MQ=60)
TCCCCGATGTTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGG > SRR4302534.6467142/1‑94 (MQ=60)
TCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCTCGTGCAGAATCACCAAACCTGTACTGTTACTCGAAGG > SRR4302534.4887418/1‑94 (MQ=60)
TCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACTAAACCTGTACTGTTACTCGAAGG > SRR4302534.1719130/1‑94 (MQ=60)
TCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGG > SRR4302534.3978320/1‑94 (MQ=60)
CCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCT < SRR4302534.3280348/94‑1 (MQ=60)
CCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCT > SRR4302534.6529978/1‑94 (MQ=60)
CCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCT < SRR4302534.2087991/94‑1 (MQ=60)
CCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTT < SRR4302534.5043879/94‑1 (MQ=60)
GATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTT > SRR4302534.2487217/1‑94 (MQ=60)
ATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTT < SRR4302534.2753533/94‑1 (MQ=60)
TGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATTACCAAACCTGTACTGTTACTCGAAGGCTTTTTT > SRR4302534.5121671/1‑94 (MQ=60)
TGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTT > SRR4302534.5845477/1‑94 (MQ=60)
GCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTG > SRR4302534.3042817/1‑94 (MQ=60)
TGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGAT < SRR4302534.2262312/94‑1 (MQ=60)
GACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATG < SRR4302534.2502465/94‑1 (MQ=60)
CCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCA < SRR4302534.5164275/94‑1 (MQ=60)
CCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCA < SRR4302534.66908/94‑1 (MQ=60)
CCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAG > SRR4302534.2422314/1‑94 (MQ=60)
CTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGA < SRR4302534.6448477/94‑1 (MQ=60)
CTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGA > SRR4302534.977169/1‑94 (MQ=60)
TTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAG < SRR4302534.5955240/94‑1 (MQ=60)
TTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGA < SRR4302534.3474847/94‑1 (MQ=60)
TTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGA < SRR4302534.4357568/94‑1 (MQ=60)
TTGGCGTAGCCCGTCGCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGCGA < SRR4302534.5257625/94‑1 (MQ=60)
GGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATC < SRR4302534.1171802/94‑1 (MQ=60)
gcgtggccttaCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAACCCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCT < SRR4302534.2520312/83‑1 (MQ=60)
GCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCT < SRR4302534.3859017/94‑1 (MQ=60)
GCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCT < SRR4302534.6124319/94‑1 (MQ=60)
CGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTG > SRR4302534.4171897/1‑94 (MQ=60)
CGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTG < SRR4302534.4904198/94‑1 (MQ=60)
TAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCC < SRR4302534.4995869/94‑1 (MQ=60)
TAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCC < SRR4302534.2434937/94‑1 (MQ=60)
TAGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCC < SRR4302534.3124045/94‑1 (MQ=60)
AGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCG > SRR4302534.1454436/1‑94 (MQ=60)
AGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCG < SRR4302534.1524073/94‑1 (MQ=60)
AGCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCG > SRR4302534.5512041/1‑94 (MQ=60)
GCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGA < SRR4302534.1200077/94‑1 (MQ=60)
GCCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGA < SRR4302534.5515843/94‑1 (MQ=60)
CCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGAC > SRR4302534.4057740/1‑94 (MQ=60)
CCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGAC > SRR4302534.6174211/1‑94 (MQ=60)
CCCGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGAC > SRR4302534.2955239/1‑94 (MQ=60)
CACGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGAC < SRR4302534.4481205/94‑1 (MQ=60)
CGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGA > SRR4302534.423110/1‑94 (MQ=60)
CGTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTG‑TACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAT > SRR4302534.343475/1‑94 (MQ=60)
GTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAT > SRR4302534.3304046/1‑94 (MQ=60)
GTCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGAAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGAT < SRR4302534.1033283/94‑1 (MQ=60)
TCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATT < SRR4302534.3287228/94‑1 (MQ=60)
TCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATT < SRR4302534.3932271/94‑1 (MQ=60)
TCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATT < SRR4302534.5508897/94‑1 (MQ=60)
TCTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACCGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATT > SRR4302534.416404/1‑94 (MQ=60)
CTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTT < SRR4302534.5325274/94‑1 (MQ=60)
CTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTT < SRR4302534.6342287/94‑1 (MQ=60)
CTCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTT < SRR4302534.562084/94‑1 (MQ=60)
TCGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTC < SRR4302534.2283538/94‑1 (MQ=60)
CGAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCT > SRR4302534.1998550/1‑94 (MQ=60)
GAAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTG < SRR4302534.6336819/94‑1 (MQ=60)
AAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGC > SRR4302534.1578853/1‑94 (MQ=60)
AAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGC > SRR4302534.1892458/1‑94 (MQ=60)
AAGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGC > SRR4302534.1121131/1‑94 (MQ=60)
AGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCG > SRR4302534.2816884/1‑94 (MQ=60)
AGAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCG < SRR4302534.5726389/94‑1 (MQ=60)
GAAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGC > SRR4302534.3001088/1‑94 (MQ=60)
AAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCA > SRR4302534.595701/1‑94 (MQ=60)
AAGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCA < SRR4302534.2610936/94‑1 (MQ=60)
AGCTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAA > SRR4302534.2612875/1‑94 (MQ=60)
CTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACA < SRR4302534.2957103/94‑1 (MQ=60)
CTCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATCCCAGAGATCTGCCTACGATTTCTGCCCAACA < SRR4302534.380242/94‑1 (MQ=60)
TCTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTTCCGACGATTTCTGCGCAACAT > SRR4302534.4950850/1‑94 (MQ=60)
CTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATT > SRR4302534.1387842/1‑94 (MQ=60)
CTGCGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATT < SRR4302534.878814/94‑1 (MQ=60)
CGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTC < SRR4302534.3929147/94‑1 (MQ=60)
CGACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTC > SRR4302534.461494/1‑94 (MQ=60)
GACTGCGCGCGGGGGGTATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCA > SRR4302534.4015333/1‑94 (MQ=60)
GACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCA > SRR4302534.2108699/1‑94 (MQ=60)
GACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCA > SRR4302534.5554190/1‑94 (MQ=60)
GACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCA > SRR4302534.4015335/1‑94 (MQ=60)
GACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCA > SRR4302534.1325055/1‑94 (MQ=60)
ACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCAT < SRR4302534.4646608/94‑1 (MQ=60)
ACTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCAT > SRR4302534.5786422/1‑94 (MQ=60)
CTGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCATA < SRR4302534.2651252/94‑1 (MQ=60)
TGCGCGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCATAC > SRR4302534.4589345/1‑94 (MQ=60)
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CGCTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGTGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCATAC > NC_000913/4263468‑4263650
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
