Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,293,107 |
A→G |
T350A (ACC→GCC) |
gltP → |
glutamate‑aspartate symport protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,293,107 | 0 | A | G | 100.0%
| 916.7
/ NA
| 266 | T350A (ACC→GCC) | gltP | glutamate‑aspartate symport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (146/120); total (146/120) |
Only 100 of 274 total aligned reads displayed.
CAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGACCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTG > NC_000913/4293017‑4293196
|
cAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGcc < 1:6393899/93‑1 (MQ=255)
aaaGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCt > 1:2927570/1‑93 (MQ=255)
aaaGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCt > 1:1799539/1‑93 (MQ=255)
aaaGGATTGCCGCTATCTTCATCGCGCAGTTGGATGGCATTGACCTGTCCATCTTGCAGGAAATCATACTGGTGCTGACGCTGATGGCGGCCt > 1:4022258/1‑93 (MQ=255)
aaGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTc < 1:2667137/93‑1 (MQ=255)
aaGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTc > 2:172360/1‑93 (MQ=255)
aaGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTc > 1:650636/1‑93 (MQ=255)
aGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCg < 1:3865687/93‑1 (MQ=255)
ttGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAg < 1:4162210/93‑1 (MQ=255)
tGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAgg < 2:4998614/93‑1 (MQ=255)
gCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAggg > 2:5693825/1‑93 (MQ=255)
gCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAggg > 1:3588806/1‑93 (MQ=255)
gCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAggg < 1:1062264/93‑1 (MQ=255)
gCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAggg > 1:4322565/1‑93 (MQ=255)
ccGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGa < 2:1944277/93‑1 (MQ=255)
cGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGAt > 2:4905902/1‑93 (MQ=255)
gCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGAtt > 1:2696649/1‑93 (MQ=255)
cTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTg > 2:1598610/1‑93 (MQ=255)
aTCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCt > 2:5099930/1‑93 (MQ=255)
tCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTg > 1:6195592/1‑93 (MQ=255)
tCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTg > 2:1267402/1‑93 (MQ=255)
cTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTgg < 1:2402567/93‑1 (MQ=255)
ttCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGc > 1:3820708/1‑93 (MQ=255)
ttCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGc < 1:4204840/93‑1 (MQ=255)
tCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCg > 1:284775/1‑93 (MQ=255)
tCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCg > 2:6074913/1‑93 (MQ=255)
tCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCg > 2:2216374/1‑93 (MQ=255)
cATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGt < 2:2779234/93‑1 (MQ=255)
cATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGt < 1:4462060/93‑1 (MQ=255)
cATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGt < 1:4618246/93‑1 (MQ=255)
cATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGt < 1:3625490/93‑1 (MQ=255)
aTCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTg > 1:2632270/1‑93 (MQ=255)
tCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGc > 2:3992307/1‑93 (MQ=255)
cgcgCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGcc < 2:5295111/93‑1 (MQ=255)
cgcgCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGcc < 2:5966277/93‑1 (MQ=255)
cgcgCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGcc < 2:2237288/93‑1 (MQ=255)
gcgcAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCt < 1:843341/93‑1 (MQ=255)
gcgcAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCt < 1:2181317/93‑1 (MQ=255)
gcgcAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCt > 1:2055289/1‑93 (MQ=255)
cgcAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTg > 2:5499568/1‑93 (MQ=255)
gcAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTgg > 2:2865802/1‑93 (MQ=255)
gcAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTgg < 2:6225520/93‑1 (MQ=255)
gcAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTgg > 2:682302/1‑93 (MQ=255)
gTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCgt > 2:872164/1‑93 (MQ=255)
gTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCgt > 2:3800213/1‑93 (MQ=255)
ttGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCgtg < 1:4511715/93‑1 (MQ=255)
tGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCgtgt < 2:3177089/93‑1 (MQ=255)
gTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTc < 1:79210/93‑1 (MQ=255)
ggCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGttt < 2:2582330/93‑1 (MQ=255)
cATGGACCTGTCCATCTGGCAGGAAAGCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTtgt < 2:3943590/93‑1 (MQ=255)
ttGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTgtgg > 1:1824293/1‑93 (MQ=255)
gACGTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGCGCCGTTTgtgggg > 1:540140/1‑91 (MQ=255)
ccTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGtt < 1:522102/93‑1 (MQ=255)
ccTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGtt > 1:5056637/1‑93 (MQ=255)
ccTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGtt < 1:1570155/93‑1 (MQ=255)
ccTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGtt < 1:369273/93‑1 (MQ=255)
ccTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGtt > 2:1196846/1‑93 (MQ=255)
cTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTg < 2:3290898/93‑1 (MQ=255)
cTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTg < 1:958715/93‑1 (MQ=255)
tGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGc < 2:5041751/93‑1 (MQ=255)
tGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGc < 1:2977478/93‑1 (MQ=255)
tCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTg > 2:4168538/1‑93 (MQ=255)
ccATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGGAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGCGTTGCCgg > 1:557788/1‑93 (MQ=255)
ccATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTgg > 1:5663376/1‑93 (MQ=255)
cATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGc > 2:5244296/1‑93 (MQ=255)
cATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGGTGCTGGc > 1:1627718/1‑93 (MQ=255)
aTCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCa > 1:753919/1‑93 (MQ=255)
tGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACg > 2:3577744/1‑93 (MQ=255)
tGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACg < 1:6345865/93‑1 (MQ=255)
ggCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGc < 2:2090984/93‑1 (MQ=255)
ggCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGc > 1:6124984/1‑93 (MQ=255)
ggAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTggg < 2:5901513/93‑1 (MQ=255)
ggAAATCATTCTGGAGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTggg > 1:5859657/1‑93 (MQ=255)
gAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGt < 1:5895785/93‑1 (MQ=255)
aTTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTa < 1:3360069/93‑1 (MQ=255)
ttCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAg > 2:1852107/1‑93 (MQ=255)
tGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAggga > 2:2334370/1‑91 (MQ=255)
tGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTa > 2:4589989/1‑93 (MQ=255)
ggTGCTGACGCTGATGGTTGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTAt < 2:1505732/93‑1 (MQ=255)
ggTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTAt > 1:2333050/1‑93 (MQ=255)
ggTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTAt < 1:308407/93‑1 (MQ=255)
ggTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTAt < 2:539071/93‑1 (MQ=255)
gTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTAtt > 2:5222176/1‑93 (MQ=255)
gTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTAtt > 2:4649882/1‑93 (MQ=255)
tGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTc < 1:5702450/93‑1 (MQ=255)
gACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTTCGCt > 1:4393214/1‑93 (MQ=255)
aCGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTg > 1:2349138/1‑93 (MQ=255)
aCGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTg > 2:230984/1‑93 (MQ=255)
gCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGa < 1:4958705/93‑1 (MQ=255)
cTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGaa < 1:1754734/93‑1 (MQ=255)
cTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGaa < 1:1233961/93‑1 (MQ=255)
gATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAgg > 1:5812467/1‑93 (MQ=255)
gATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAgg < 1:1454292/93‑1 (MQ=255)
aTGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGt > 2:4435304/1‑93 (MQ=255)
tggtggCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTc < 1:2721848/93‑1 (MQ=255)
tggtggCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGGGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTc > 1:3894187/1‑93 (MQ=255)
ggTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCt < 1:4740587/93‑1 (MQ=255)
ggTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCt < 1:1407205/93‑1 (MQ=255)
gTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTg < 2:5184883/93‑1 (MQ=255)
gTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTg < 2:6119999/93‑1 (MQ=255)
|
CAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGACCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTG > NC_000913/4293017‑4293196
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGACCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGT > NC_000913/4293017‑4293200
|
CAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCT > SRR4302534.3770310/1‑94 (MQ=60)
CAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCT > SRR4302534.1846262/1‑94 (MQ=60)
CAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCT > SRR4302534.3004438/1‑94 (MQ=60)
CAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCT < SRR4302534.6566576/94‑1 (MQ=60)
CAAAGTATTGCCGCTATCTTCATCGCGCAGTGGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCT < SRR4302534.6359207/94‑1 (MQ=60)
CAAAGGATTGCCGCTATCTTCATCGCGCAGTTGGATGGCATTGACCTGTCCATCTTGCAGGAAATCATACTGGTGCTGACGCTGATGGCGGCCT > SRR4302534.4130102/1‑94 (MQ=60)
AAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTC > SRR4302534.3824200/1‑94 (MQ=60)
AAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTC > SRR4302534.666426/1‑94 (MQ=60)
AAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCG < SRR4302534.2737637/94‑1 (MQ=60)
AGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGA > SRR4302534.5487513/1‑94 (MQ=60)
AGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGA < SRR4302534.3969473/94‑1 (MQ=60)
TATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAA > SRR4302534.3039719/1‑94 (MQ=60)
ATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAG > SRR4302534.6305453/1‑94 (MQ=60)
TTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGG < SRR4302534.4274631/94‑1 (MQ=60)
TTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGG < SRR4302534.2284255/94‑1 (MQ=60)
TGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGG > SRR4302534.3685327/1‑94 (MQ=60)
TGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGG > SRR4302534.4439547/1‑94 (MQ=60)
GCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGA < SRR4302534.1089798/94‑1 (MQ=60)
GCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGA < SRR4302534.404328/94‑1 (MQ=60)
CGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATT < SRR4302534.654671/94‑1 (MQ=60)
CGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATT > SRR4302534.2767897/1‑94 (MQ=60)
CGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATT > SRR4302534.864449/1‑94 (MQ=60)
CTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGC < SRR4302534.3321588/94‑1 (MQ=60)
CTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGC < SRR4302534.2993931/94‑1 (MQ=60)
TATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCT > SRR4302534.6615792/1‑94 (MQ=60)
TATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCT > SRR4302534.1384174/1‑94 (MQ=60)
TATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCT < SRR4302534.2441248/94‑1 (MQ=60)
ATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTG > SRR4302534.4068798/1‑94 (MQ=60)
ATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTG > SRR4302534.6364164/1‑94 (MQ=60)
ATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTG > SRR4302534.1773030/1‑94 (MQ=60)
TCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGG < SRR4302534.1490867/94‑1 (MQ=60)
CTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGC > SRR4302534.469311/1‑94 (MQ=60)
CTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGC > SRR4302534.3923350/1‑94 (MQ=60)
CTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGC < SRR4302534.2466425/94‑1 (MQ=60)
TTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCG < SRR4302534.4318348/94‑1 (MQ=60)
TTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCG > SRR4302534.292137/1‑94 (MQ=60)
TTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCG > SRR4302534.3528438/1‑94 (MQ=60)
CATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTG > SRR4302534.5130343/1‑94 (MQ=60)
CATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTG > SRR4302534.728792/1‑94 (MQ=60)
CATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTG < SRR4302534.4743562/94‑1 (MQ=60)
CATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTG > SRR4302534.2701922/1‑94 (MQ=60)
CATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTG < SRR4302534.3722956/94‑1 (MQ=60)
CATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTG < SRR4302534.4582702/94‑1 (MQ=60)
ATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGC > SRR4302534.6028318/1‑94 (MQ=60)
CGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCT > SRR4302534.1935737/1‑94 (MQ=60)
CGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCT > SRR4302534.2108982/1‑94 (MQ=60)
CGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCT < SRR4302534.4194688/94‑1 (MQ=60)
GCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTG < SRR4302534.2238972/94‑1 (MQ=60)
GCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTG < SRR4302534.864593/94‑1 (MQ=60)
CGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGG < SRR4302534.452161/94‑1 (MQ=60)
CGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGG < SRR4302534.2738007/94‑1 (MQ=60)
CGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGAATGCTGGCGTGCCTGG > SRR4302534.2701507/1‑94 (MQ=60)
CAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCG > SRR4302534.3457895/1‑94 (MQ=60)
GTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTG < SRR4302534.1496799/94‑1 (MQ=60)
GTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTG > SRR4302534.3987811/1‑94 (MQ=60)
GTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTG < SRR4302534.5842317/94‑1 (MQ=60)
GTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTG < SRR4302534.2380557/94‑1 (MQ=60)
TTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGT < SRR4302534.4633908/94‑1 (MQ=60)
GTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCG < SRR4302534.81340/94‑1 (MQ=60)
TATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGT < SRR4302534.5054997/94‑1 (MQ=60)
GTGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTT > SRR4302534.3806067/1‑94 (MQ=60)
ATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTT > SRR4302534.2403711/1‑94 (MQ=60)
ATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTT > SRR4302534.6600648/1‑94 (MQ=60)
GGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTGGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTG < SRR4302534.4641086/94‑1 (MQ=60)
GGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTG > SRR4302534.1833928/1‑94 (MQ=60)
GCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGT > SRR4302534.5808060/1‑94 (MQ=60)
CATTGACCTGTCCATCGGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTG > SRR4302534.3114822/1‑94 (MQ=60)
ATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGG > SRR4302534.1871734/1‑94 (MQ=60)
TGACGTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGCGCCGTTTGTGGGG > SRR4302534.553511/1‑94 (MQ=60)
TGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTG < SRR4302534.4539497/94‑1 (MQ=60)
TGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCAAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTG < SRR4302534.2435871/94‑1 (MQ=60)
GACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGT < SRR4302534.3730893/94‑1 (MQ=60)
GACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGT < SRR4302534.3323653/94‑1 (MQ=60)
GACCTGTACATCTGGCAGGAAACCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGT < SRR4302534.6236902/94‑1 (MQ=60)
ACCTGTCCATCTGGCAGGAAATCTTTCTGGTGCTGACGCTGATGGTTGCCTCGAAAGGGATTGCTGGCGTGGCTGGCGTGTCGATTGTGGTGTG > SRR4302534.1187557/1‑94 (MQ=60)
ACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTT > SRR4302534.5276298/1‑94 (MQ=60)
ACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTT > SRR4302534.5193214/1‑94 (MQ=60)
CCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTG < SRR4302534.378690/94‑1 (MQ=60)
CCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTG < SRR4302534.1611275/94‑1 (MQ=60)
CCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTG > SRR4302534.1631549/1‑94 (MQ=60)
CCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTG < SRR4302534.535091/94‑1 (MQ=60)
CCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTG > SRR4302534.2909046/1‑94 (MQ=60)
CTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGC < SRR4302534.983141/94‑1 (MQ=60)
TGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCT < SRR4302534.3055409/94‑1 (MQ=60)
TGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCT > SRR4302534.83938/1‑94 (MQ=60)
TGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCT < SRR4302534.369904/94‑1 (MQ=60)
TGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCT < SRR4302534.6017259/94‑1 (MQ=60)
TCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGGAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGCGTTGCCGG > SRR4302534.571538/1‑94 (MQ=60)
TCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGG > SRR4302534.5816693/1‑94 (MQ=60)
CCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGC > SRR4302534.2233388/1‑94 (MQ=60)
CCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGC > SRR4302534.5867995/1‑94 (MQ=60)
CCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGC > SRR4302534.5942459/1‑94 (MQ=60)
CCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGGTGCTGGC > SRR4302534.1670184/1‑94 (MQ=60)
CATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCA > SRR4302534.772598/1‑94 (MQ=60)
CATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCA < SRR4302534.4751031/94‑1 (MQ=60)
CATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCA > SRR4302534.1849410/1‑94 (MQ=60)
AGCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAA > SRR4302534.6368464/1‑94 (MQ=60)
TCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAAC < SRR4302534.4179131/94‑1 (MQ=60)
CTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACG < SRR4302534.2772496/94‑1 (MQ=60)
CTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACG > SRR4302534.4496543/1‑94 (MQ=60)
CTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACG < SRR4302534.918338/94‑1 (MQ=60)
TGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGC > SRR4302534.6291587/1‑94 (MQ=60)
TGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGC < SRR4302534.6517251/94‑1 (MQ=60)
TGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGC > SRR4302534.5821862/1‑94 (MQ=60)
GGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCT < SRR4302534.2123540/94‑1 (MQ=60)
CAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGG > SRR4302534.1488679/1‑94 (MQ=60)
CAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGG > SRR4302534.2544265/1‑94 (MQ=60)
CAGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGCCGTTTGTGGTGTTGCTGGCAACGCTGG > SRR4302534.904860/1‑94 (MQ=60)
AGGAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGG < SRR4302534.480839/94‑1 (MQ=60)
AGGAAATCATTCTGGAGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGG > SRR4302534.6018754/1‑94 (MQ=60)
GAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTG > SRR4302534.2042408/1‑94 (MQ=60)
GAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTA < SRR4302534.6055870/94‑1 (MQ=60)
GAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTA < SRR4302534.1631661/94‑1 (MQ=60)
GAAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTA > SRR4302534.3117620/1‑94 (MQ=60)
AAATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAG < SRR4302534.4332079/94‑1 (MQ=60)
AATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGC > SRR4302534.1410030/1‑94 (MQ=60)
ATCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCG < SRR4302534.444633/94‑1 (MQ=60)
TCATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGT > SRR4302534.3951955/1‑94 (MQ=60)
CATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTA > SRR4302534.3979065/1‑94 (MQ=60)
CATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTA > SRR4302534.1827108/1‑94 (MQ=60)
CATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTA > SRR4302534.799646/1‑94 (MQ=60)
ATTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAG < SRR4302534.3450063/94‑1 (MQ=60)
TTCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGG < SRR4302534.5709648/94‑1 (MQ=60)
TCTGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGT > SRR4302534.2718089/1‑94 (MQ=60)
TGGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTAT > SRR4302534.2394941/1‑94 (MQ=60)
GGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATT < SRR4302534.316375/94‑1 (MQ=60)
GGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATT > SRR4302534.2731554/1‑94 (MQ=60)
GGTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATT > SRR4302534.767014/1‑94 (MQ=60)
GGTGCGAACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATT < SRR4302534.5713954/94‑1 (MQ=60)
GTGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTC < SRR4302534.541281/94‑1 (MQ=60)
TGCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCC < SRR4302534.5856917/94‑1 (MQ=60)
GCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCG < SRR4302534.5232467/94‑1 (MQ=60)
GCTGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCG < SRR4302534.2774887/94‑1 (MQ=60)
TGACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTTCGCT > SRR4302534.4511697/1‑94 (MQ=60)
GACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTG > SRR4302534.2411481/1‑94 (MQ=60)
GCGCTGATGTTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGATAGCGTAGGTCTTCCGCTGG < SRR4302534.6440861/94‑1 (MQ=60)
ACGCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGG < SRR4302534.4312348/94‑1 (MQ=60)
CGCTTATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGA < SRR4302534.2812627/94‑1 (MQ=60)
GCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAA < SRR4302534.5092986/94‑1 (MQ=60)
GCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAA < SRR4302534.6076738/94‑1 (MQ=60)
GCTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAA < SRR4302534.4631658/94‑1 (MQ=60)
CTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAG < SRR4302534.1266480/94‑1 (MQ=60)
CTGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAG < SRR4302534.1800297/94‑1 (MQ=60)
TGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGG > SRR4302534.5970225/1‑94 (MQ=60)
TGATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGG > SRR4302534.1782704/1‑94 (MQ=60)
GATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGT < SRR4302534.1492544/94‑1 (MQ=60)
GATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGT > SRR4302534.2965050/1‑94 (MQ=60)
ATGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGGGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTC > SRR4302534.3998704/1‑94 (MQ=60)
TGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCT < SRR4302534.2793676/94‑1 (MQ=60)
TGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCT < SRR4302534.4343767/94‑1 (MQ=60)
TGGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCT > SRR4302534.5090390/1‑94 (MQ=60)
GGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTG > SRR4302534.6249189/1‑94 (MQ=60)
GGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTG < SRR4302534.4869279/94‑1 (MQ=60)
GGTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTG < SRR4302534.1444210/94‑1 (MQ=60)
GTGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGG < SRR4302534.6005580/94‑1 (MQ=60)
TGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGC < SRR4302534.1877041/94‑1 (MQ=60)
TGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGC < SRR4302534.5136442/94‑1 (MQ=60)
TGGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGC > SRR4302534.3493864/1‑94 (MQ=60)
GGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCG > SRR4302534.2694331/1‑94 (MQ=60)
GGCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCG < SRR4302534.4979899/94‑1 (MQ=60)
GCCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGT < SRR4302534.4909990/94‑1 (MQ=60)
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CAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGACCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGT > NC_000913/4293017‑4293200
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |