Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,315,095 |
C→T |
A127T (GCT→ACT) |
phnL ← |
ATP‑binding component of phosphonate transport |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,315,095 | 0 | C | T | 99.6%
| 991.8
/ ‑5.5
| 259 | A127T (GCT→ACT) | phnL | ATP‑binding component of phosphonate transport |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (122/136); total (122/137) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.88e-01 |
Only 100 of 276 total aligned reads displayed.
CTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACT > NC_000913/4315006‑4315184
|
ctgctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAgtggc < 2:3487904/93‑1 (MQ=255)
ctgctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAgtggc > 2:2824435/1‑93 (MQ=255)
ctgctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAgtggc < 1:2176920/93‑1 (MQ=255)
tgctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAgtggcg > 2:4719525/1‑93 (MQ=255)
gctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGgcgc > 1:6430269/1‑93 (MQ=255)
ctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCa < 1:5916117/93‑1 (MQ=255)
ctgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCa < 2:1258789/93‑1 (MQ=255)
tgTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAg > 1:427903/1‑93 (MQ=255)
gTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAgg < 1:3556857/93‑1 (MQ=255)
gTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAgg > 1:2461297/1‑93 (MQ=255)
cGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCCGGCtt < 1:3613077/93‑1 (MQ=255)
cGCCACCGGAAAATGTCGATGGTGACAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCtt < 1:4586888/93‑1 (MQ=255)
gCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTc < 1:5341732/93‑1 (MQ=255)
gCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTc > 2:2851281/1‑93 (MQ=255)
ccACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCa < 2:1735240/93‑1 (MQ=255)
ccACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCa < 2:3207643/93‑1 (MQ=255)
cACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAc > 1:6329629/1‑93 (MQ=255)
cACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAc > 1:1046424/1‑93 (MQ=255)
aCCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAcg < 2:1585269/93‑1 (MQ=255)
aCCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAcg > 1:4789467/1‑93 (MQ=255)
aCCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAcg < 1:4092217/93‑1 (MQ=255)
ccGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAcgc < 2:671193/93‑1 (MQ=255)
ccGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAcgc > 1:2720975/1‑93 (MQ=255)
gAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGa < 1:1151512/93‑1 (MQ=255)
gAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGa < 1:2869167/93‑1 (MQ=255)
gAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGa > 1:4988347/1‑93 (MQ=255)
aaaaTGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGaa < 2:5833212/93‑1 (MQ=255)
aaaaTGCCGATGGTGCCAGGTGCCACAGGCGTTCCGGCCCGCTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGaa > 2:2752781/1‑93 (MQ=255)
aaaTGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAAc < 1:2600325/93‑1 (MQ=255)
aaaTGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAAc > 1:6142146/1‑93 (MQ=255)
aaTGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACg > 2:3247359/1‑93 (MQ=255)
aaTGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCCGAACg > 1:3491613/1‑93 (MQ=255)
aTGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGc < 2:3067558/93‑1 (MQ=255)
tGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGcc < 1:55691/93‑1 (MQ=255)
tGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGcc < 1:22255/93‑1 (MQ=255)
tCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCgg > 2:6250772/1‑93 (MQ=255)
gATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTa > 2:5204922/1‑93 (MQ=255)
aTGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTAt < 2:4833043/93‑1 (MQ=255)
tGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATc < 1:5307421/93‑1 (MQ=255)
gtgccaggtgccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGa < 2:6299085/93‑1 (MQ=255)
ccaggtgccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGagca > 2:1041736/1‑93 (MQ=255)
caggtgccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGagcag < 1:1380250/93‑1 (MQ=255)
aggtgccaCAGGCGTGCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGagcagc < 1:5680954/93‑1 (MQ=255)
ggtgccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCg > 2:5117042/1‑93 (MQ=255)
ggtgccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCg > 1:200109/1‑93 (MQ=255)
tgccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGc < 2:6446964/93‑1 (MQ=255)
gccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCt > 2:3972224/1‑93 (MQ=255)
ccaCAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTg > 1:4496919/1‑93 (MQ=255)
caGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCAt < 2:4216611/93‑1 (MQ=255)
cggCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATc < 1:3942019/92‑1 (MQ=255)
aGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATc < 1:1933402/93‑1 (MQ=255)
ggCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATca < 1:3072974/93‑1 (MQ=255)
gCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATcac < 2:5306453/93‑1 (MQ=255)
gTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATcacca < 1:896878/93‑1 (MQ=255)
gTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATcacca > 2:601793/1‑93 (MQ=255)
ttCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATcaccac > 2:6101791/1‑93 (MQ=255)
tCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACt < 1:4199324/93‑1 (MQ=255)
tCCGGCACGTTCAGGCGGGTCAGAAGACGCGCGGGTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACt < 1:4925442/93‑1 (MQ=255)
cGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTc < 2:1522301/93‑1 (MQ=255)
cGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCCTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCCAACAGCGGCTGCATCACCACGTc > 2:3270582/1‑93 (MQ=255)
ggCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTcc > 1:3711716/1‑93 (MQ=255)
gCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCa > 1:1252441/1‑93 (MQ=255)
gCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCa > 1:1678610/1‑93 (MQ=255)
cACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAg < 2:105336/93‑1 (MQ=255)
aCGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTTACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGt > 1:5213454/1‑93 (MQ=255)
aCGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGt > 2:1907526/1‑93 (MQ=255)
aCGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGt < 2:3897658/93‑1 (MQ=255)
cAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTga > 2:4335263/1‑93 (MQ=255)
cAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACCTCCAGTGCTga > 2:5776488/1‑93 (MQ=255)
aGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTgag > 2:3806972/1‑93 (MQ=255)
gCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGAt < 1:4729214/93‑1 (MQ=255)
gCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGAt < 1:1008905/93‑1 (MQ=255)
gCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGAt < 2:496335/93‑1 (MQ=255)
gggTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATAc < 1:3249241/93‑1 (MQ=255)
gggTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATAc < 1:2327018/93‑1 (MQ=255)
ggTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATAcg < 2:2569645/93‑1 (MQ=255)
gTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATAcgc < 1:5100449/93‑1 (MQ=255)
gagaAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCgg > 2:3615738/1‑93 (MQ=255)
agaagaCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCggg < 1:4615815/93‑1 (MQ=255)
agaagaCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCggg < 1:390227/93‑1 (MQ=255)
gaagaCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGa < 2:4067520/93‑1 (MQ=255)
aagaCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGAt > 2:5570399/1‑93 (MQ=255)
agaCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGGTg > 1:157362/1‑93 (MQ=255)
agaCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATg < 2:4436269/93‑1 (MQ=255)
gaCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGa < 2:1342379/93‑1 (MQ=255)
gaCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGa > 1:4684918/1‑93 (MQ=255)
aCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGAc < 1:3590851/93‑1 (MQ=255)
aCGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGAc < 1:2973201/93‑1 (MQ=255)
cgcgcgGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGAcg > 1:3853982/1‑93 (MQ=255)
gcgcgGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGAcgc > 2:371266/1‑93 (MQ=255)
gcgGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACgcgc > 2:1989639/1‑93 (MQ=255)
ggCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAg > 2:4522840/1‑93 (MQ=255)
ggCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAg > 2:869840/1‑93 (MQ=255)
gCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGa > 1:5638321/1‑93 (MQ=255)
gCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGa > 1:5531990/1‑93 (MQ=255)
gCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGa > 1:975421/1‑93 (MQ=255)
gCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGa < 2:3795306/93‑1 (MQ=255)
cTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGaa > 2:2232529/1‑93 (MQ=255)
tttAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGaaa > 1:1851627/1‑93 (MQ=255)
tAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACt > 1:5445451/1‑93 (MQ=255)
|
CTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACT > NC_000913/4315006‑4315184
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGC > NC_000913/4315003‑4315187
|
GCGCTGCTGTTCGCCACCGGAAAATGTCGATGTTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTG > SRR4302534.1493232/1‑94 (MQ=60)
GCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTG < SRR4302534.2989003/94‑1 (MQ=60)
GCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTG < SRR4302534.2264611/94‑1 (MQ=60)
CGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGG < SRR4302534.1022036/94‑1 (MQ=60)
CGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGG < SRR4302534.3318239/94‑1 (MQ=60)
CGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGG < SRR4302534.4728581/94‑1 (MQ=60)
CGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGG < SRR4302534.6218753/94‑1 (MQ=60)
CTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCG < SRR4302534.4898115/94‑1 (MQ=60)
CTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCG < SRR4302534.2234435/94‑1 (MQ=60)
TGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGC > SRR4302534.6603638/1‑94 (MQ=60)
TGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGC < SRR4302534.1098410/94‑1 (MQ=60)
CTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAG > SRR4302534.438830/1‑94 (MQ=60)
CTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAG > SRR4302534.1861978/1‑94 (MQ=60)
CTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAG < SRR4302534.6076765/94‑1 (MQ=60)
TGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGG > SRR4302534.2526691/1‑94 (MQ=60)
GTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGC > SRR4302534.5097484/1‑94 (MQ=60)
GTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGC < SRR4302534.3652556/94‑1 (MQ=60)
TCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTT < SRR4302534.1071434/94‑1 (MQ=60)
TCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTT < SRR4302534.719455/94‑1 (MQ=60)
TCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTT < SRR4302534.4966358/94‑1 (MQ=60)
CGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCCGGCTTC < SRR4302534.3710235/94‑1 (MQ=60)
CGCCACCGGAAAATGTCGATGGTGACAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTC < SRR4302534.4711360/94‑1 (MQ=60)
GCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCA > SRR4302534.5490088/1‑94 (MQ=60)
GCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCA < SRR4302534.4771085/94‑1 (MQ=60)
GCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCA < SRR4302534.5485742/94‑1 (MQ=60)
GCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCA > SRR4302534.2405475/1‑94 (MQ=60)
GCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCA > SRR4302534.1377769/1‑94 (MQ=60)
CCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAC > SRR4302534.6500647/1‑94 (MQ=60)
CCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAC > SRR4302534.1073476/1‑94 (MQ=60)
CCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCAC > SRR4302534.1619330/1‑94 (MQ=60)
CCCCGGAAAATGTCGATGGTGCCAGGTGCCACCGGCGTTCCGGCACGTTCAGGCGGGTTAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACG < SRR4302534.2267455/94‑1 (MQ=60)
CACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACG > SRR4302534.4281181/1‑94 (MQ=60)
CACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACG > SRR4302534.4919514/1‑94 (MQ=60)
CACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACG > SRR4302534.5049614/1‑94 (MQ=60)
ACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGC < SRR4302534.4202180/94‑1 (MQ=60)
ACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGC > SRR4302534.466795/1‑94 (MQ=60)
ACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGC > SRR4302534.2792777/1‑94 (MQ=60)
CCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCG < SRR4302534.5427738/94‑1 (MQ=60)
CGGAAACTGCCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGAACCGCGGCGTTAGTGGCGCAGGCTTCCCGCAG > SRR4302534.187067/1‑94 (MQ=60)
GGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGA < SRR4302534.3087423/94‑1 (MQ=60)
GGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGA > SRR4302534.5123310/1‑94 (MQ=60)
GAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAA < SRR4302534.1181698/94‑1 (MQ=60)
GAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAA < SRR4302534.5302391/94‑1 (MQ=60)
GAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAA < SRR4302534.2944505/94‑1 (MQ=60)
AAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAAC > SRR4302534.6309198/1‑94 (MQ=60)
AAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAAC > SRR4302534.6309197/1‑94 (MQ=60)
AAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAAC < SRR4302534.6041362/94‑1 (MQ=60)
AAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACG < SRR4302534.4363021/94‑1 (MQ=60)
AAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACG > SRR4302534.4018076/1‑94 (MQ=60)
AAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACG < SRR4302534.2669127/94‑1 (MQ=60)
AAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACG < SRR4302534.3620998/94‑1 (MQ=60)
AAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCCGAACG > SRR4302534.3585461/1‑94 (MQ=60)
AATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGC > SRR4302534.4021124/1‑94 (MQ=60)
TGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCG < SRR4302534.22846/94‑1 (MQ=60)
TGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCG < SRR4302534.57192/94‑1 (MQ=60)
TGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCG < SRR4302534.1271821/94‑1 (MQ=60)
GTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGG > SRR4302534.2563726/1‑94 (MQ=60)
GTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGG > SRR4302534.2377648/1‑94 (MQ=60)
GTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGG < SRR4302534.5312307/94‑1 (MQ=60)
GATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTAT < SRR4302534.2211073/94‑1 (MQ=60)
ATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATC < SRR4302534.4892348/94‑1 (MQ=60)
ATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATC < SRR4302534.3793629/94‑1 (MQ=60)
TGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCG < SRR4302534.5450627/94‑1 (MQ=60)
GTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAG < SRR4302534.965281/94‑1 (MQ=60)
GTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAG < SRR4302534.5741993/94‑1 (MQ=60)
TGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGA > SRR4302534.471500/1‑94 (MQ=60)
GCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCA < SRR4302534.5816746/94‑1 (MQ=60)
GCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCA < SRR4302534.3292883/94‑1 (MQ=60)
GCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCA > SRR4302534.5710949/1‑94 (MQ=60)
CCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAG > SRR4302534.3955028/1‑94 (MQ=60)
CAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGC < SRR4302534.1416595/94‑1 (MQ=60)
CAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGC < SRR4302534.6283667/94‑1 (MQ=60)
CAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGC > SRR4302534.2028585/1‑94 (MQ=60)
AGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCG < SRR4302534.2933464/94‑1 (MQ=60)
AGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCG < SRR4302534.3072086/94‑1 (MQ=60)
AGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCG > SRR4302534.4839273/1‑94 (MQ=60)
AGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCG < SRR4302534.2628812/94‑1 (MQ=60)
AGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCG > SRR4302534.205362/1‑94 (MQ=60)
AGGTGCCACAGGCGTGCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCG < SRR4302534.5834781/94‑1 (MQ=60)
GGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGG > SRR4302534.2859101/1‑94 (MQ=60)
TGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCT < SRR4302534.370166/94‑1 (MQ=60)
TGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCT > SRR4302534.946555/1‑94 (MQ=60)
TGCCACAGGCGTTCCGCCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCT < SRR4302534.3843206/94‑1 (MQ=60)
GCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTG > SRR4302534.4618618/1‑94 (MQ=60)
CCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGC < SRR4302534.3671070/94‑1 (MQ=60)
CACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCA > SRR4302534.2276211/1‑94 (MQ=60)
CACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCA > SRR4302534.4073920/1‑94 (MQ=60)
CACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGGATCGAGCAGCGGCTGCA > SRR4302534.1251936/1‑94 (MQ=60)
CACAGGCGTTCCGCCACGTTCAGGCGTGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCA < SRR4302534.5584748/94‑1 (MQ=60)
ACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCAT < SRR4302534.3702397/94‑1 (MQ=60)
ACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCAT > SRR4302534.2738870/1‑94 (MQ=60)
CGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCA < SRR4302534.4047590/94‑1 (MQ=60)
AGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCA > SRR4302534.582854/1‑94 (MQ=60)
AGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCA < SRR4302534.1983952/94‑1 (MQ=60)
GGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCAC < SRR4302534.3153692/94‑1 (MQ=60)
GCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACC < SRR4302534.4216089/94‑1 (MQ=60)
GTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCAC < SRR4302534.919595/94‑1 (MQ=60)
TTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACT < SRR4302534.5408422/94‑1 (MQ=60)
TTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACT > SRR4302534.2091256/1‑94 (MQ=60)
TCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTT < SRR4302534.4593102/94‑1 (MQ=60)
TCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTT < SRR4302534.4312736/94‑1 (MQ=60)
TCCGGCACGTTCAGGCGGGTCAGAAGACGCGCGGGTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTT < SRR4302534.5058926/94‑1 (MQ=60)
CGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCC > SRR4302534.3811515/1‑94 (MQ=60)
CGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCC < SRR4302534.1104796/94‑1 (MQ=60)
GGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCA > SRR4302534.1285447/1‑94 (MQ=60)
GGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCA > SRR4302534.1722283/1‑94 (MQ=60)
GCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAG > SRR4302534.1821500/1‑94 (MQ=60)
CACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTTACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGT > SRR4302534.5354155/1‑94 (MQ=60)
ACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTG < SRR4302534.297851/94‑1 (MQ=60)
TCAGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGA < SRR4302534.3808944/94‑1 (MQ=60)
AGGCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGA > SRR4302534.5658345/1‑94 (MQ=60)
GCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATA < SRR4302534.1034823/94‑1 (MQ=60)
GCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATA < SRR4302534.3492627/94‑1 (MQ=60)
GCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATA < SRR4302534.3537998/94‑1 (MQ=60)
GCGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATA < SRR4302534.4857638/94‑1 (MQ=60)
CGGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATAC > SRR4302534.1930842/1‑94 (MQ=60)
GGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACG < SRR4302534.2388765/94‑1 (MQ=60)
GGGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACG < SRR4302534.3335766/94‑1 (MQ=60)
GGTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGC < SRR4302534.4625667/94‑1 (MQ=60)
GTGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCG < SRR4302534.5238120/94‑1 (MQ=60)
TGAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGG > SRR4302534.5830227/1‑94 (MQ=60)
GAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGG > SRR4302534.2382688/1‑94 (MQ=60)
GAGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGG < SRR4302534.1914259/94‑1 (MQ=60)
AGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGA > SRR4302534.6385761/1‑94 (MQ=60)
AGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGA < SRR4302534.4741070/94‑1 (MQ=60)
AGAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGA < SRR4302534.400197/94‑1 (MQ=60)
GAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGAT > SRR4302534.5719015/1‑94 (MQ=60)
GAAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGAT > SRR4302534.822355/1‑94 (MQ=60)
AAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGGTG > SRR4302534.161483/1‑94 (MQ=60)
AAGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATG > SRR4302534.4166545/1‑94 (MQ=60)
AGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGA < SRR4302534.5146659/94‑1 (MQ=60)
AGACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGA > SRR4302534.4812105/1‑94 (MQ=60)
ACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACG > SRR4302534.3957455/1‑94 (MQ=60)
ACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACG < SRR4302534.4410063/94‑1 (MQ=60)
ACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACG < SRR4302534.3051037/94‑1 (MQ=60)
ACGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACG < SRR4302534.3687431/94‑1 (MQ=60)
CGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGC < SRR4302534.3670646/94‑1 (MQ=60)
CGCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGC < SRR4302534.3169399/94‑1 (MQ=60)
GCGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCG < SRR4302534.6469358/94‑1 (MQ=60)
CGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGC > SRR4302534.5182951/1‑94 (MQ=60)
CGCGGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGC < SRR4302534.2696968/94‑1 (MQ=60)
GGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGA > SRR4302534.1000296/1‑94 (MQ=60)
GGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGA > SRR4302534.5790927/1‑94 (MQ=60)
GGCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGA > SRR4302534.5681306/1‑94 (MQ=60)
GCTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAA < SRR4302534.4845597/94‑1 (MQ=60)
GCTTTAATGGCGCCGGCTTCACGCGGAACGCCGGTAGCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAA < SRR4302534.6516595/94‑1 (MQ=60)
CTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGCGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGTCGCGCAGAAA > SRR4302534.3972687/1‑94 (MQ=60)
CTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATTACGCGCAGAAA > SRR4302534.5644304/1‑94 (MQ=60)
CTTTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAA > SRR4302534.1899793/1‑94 (MQ=60)
TTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACT < SRR4302534.1380373/94‑1 (MQ=60)
TTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACT < SRR4302534.5462876/94‑1 (MQ=60)
TTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACT < SRR4302534.1525359/94‑1 (MQ=60)
TTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACT > SRR4302534.5592164/1‑94 (MQ=60)
TTAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACT < SRR4302534.1623833/94‑1 (MQ=60)
TAGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTG < SRR4302534.4739542/94‑1 (MQ=60)
AGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGG < SRR4302534.4737757/94‑1 (MQ=60)
AGTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGG > SRR4302534.2451922/1‑94 (MQ=60)
GTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGC > SRR4302534.5394495/1‑94 (MQ=60)
GTGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGC < SRR4302534.3456992/94‑1 (MQ=60)
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GCGCTGCTGTTCGCCACCGGAAAATGTCGATGGTGCCAGGTGCCACAGGCGTTCCGGCACGTTCAGGCGGGTGAGAAGACGCGCGGCTTTAGCGGCGCAGGCTTCACGCGGAACGCCGGTATCGAGCAGCGGCTGCATCACCACTTCCAGTGCTGAGATACGCGGGATGACGCGCAGAAACTGGC > NC_000913/4315003‑4315187
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
