Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,444,741 |
A→G |
E1018G (GAG→GGG) |
ytfN → |
hypothetical protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,444,741 | 0 | A | G | 99.7%
| 984.2
/ NA
| 286 | E1018G (GAG→GGG) | ytfN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (139/146); minor base C (0/1); total (139/147) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 289 total aligned reads displayed.
GGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGC > NC_000913/4444651‑4444830
|
gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCTTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGc < 2:1625974/93‑1 (MQ=255)
gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGc > 1:4825430/1‑93 (MQ=255)
gcgcATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGaa > 1:5772799/1‑93 (MQ=255)
gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACTATAACCTGCAACCGGAAGGGCCGaaaa < 1:3373804/93‑1 (MQ=255)
cATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGaaaag > 2:1224353/1‑92 (MQ=255)
cATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAAc < 2:4583124/93‑1 (MQ=255)
cATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAAc < 2:5741540/93‑1 (MQ=255)
aTCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACg < 2:6344964/93‑1 (MQ=255)
tCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATATCCTGCAACCGGAAGGGCCCAAACCgg < 1:2711380/93‑1 (MQ=255)
tCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACgg < 2:398610/93‑1 (MQ=255)
cGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGc > 2:918125/1‑93 (MQ=255)
gtggtgCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCg > 2:3148476/1‑93 (MQ=255)
tggtgCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGt < 1:1995398/93‑1 (MQ=255)
ggtgCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTc > 2:1919405/1‑93 (MQ=255)
cACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGAtt < 1:5444280/93‑1 (MQ=255)
aCGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTc < 2:3226212/93‑1 (MQ=255)
aCGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTc < 2:6421780/93‑1 (MQ=255)
cGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAACACGGCGTCGATTcc > 1:3506235/1‑93 (MQ=255)
aTCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGa < 2:2071437/93‑1 (MQ=255)
aTCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGa > 1:3316840/1‑93 (MQ=255)
tCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGAt < 2:712493/93‑1 (MQ=255)
tCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGAt > 1:3133531/1‑93 (MQ=255)
tCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGAt > 1:164399/1‑93 (MQ=255)
cTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGAtt > 2:3725787/1‑93 (MQ=255)
tGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTa > 2:2434780/1‑93 (MQ=255)
tGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTa > 2:6250260/1‑93 (MQ=255)
gCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTaa > 2:5067252/1‑93 (MQ=255)
ggAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAg < 2:2307727/93‑1 (MQ=255)
ggAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAg > 2:171872/1‑93 (MQ=255)
ggAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAg > 2:5849426/1‑93 (MQ=255)
ggAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAg > 1:4710720/1‑93 (MQ=255)
ggAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGCCGATTCCGATTAACAg > 2:4828266/1‑93 (MQ=255)
gAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGt < 1:2166674/93‑1 (MQ=255)
gAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGt < 1:1339668/93‑1 (MQ=255)
aaaGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTa < 1:6223432/93‑1 (MQ=255)
aGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc < 2:4445377/93‑1 (MQ=255)
aGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc > 1:4765904/1‑93 (MQ=255)
cgcAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCt < 1:4998835/93‑1 (MQ=255)
aGTAGGCGTCTCCTGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAt < 2:3666806/93‑1 (MQ=255)
aGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTGGATTCCGATTAACAGTAACCTGAt > 2:1012081/1‑93 (MQ=255)
gTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAtt < 1:5267263/93‑1 (MQ=255)
gTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAtt < 2:5418932/93‑1 (MQ=255)
aGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGt > 1:1791337/1‑93 (MQ=255)
ggCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTc > 2:802741/1‑93 (MQ=255)
gCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTcc < 1:6109728/93‑1 (MQ=255)
gCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTcc < 1:2941362/93‑1 (MQ=255)
cGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCa < 2:1361941/93‑1 (MQ=255)
tctcCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACg > 2:259564/1‑93 (MQ=255)
tctcCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACg > 1:2860796/1‑93 (MQ=255)
ctcCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACTTGATTGTCCACGt > 1:4007668/1‑93 (MQ=255)
tcCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGtt < 2:4706610/93‑1 (MQ=255)
tcCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGtt > 1:5113165/1‑93 (MQ=255)
tcCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGtt > 1:3617057/1‑93 (MQ=255)
ccAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTg > 1:4888785/1‑93 (MQ=255)
gATGTGGTGATGCTTAAAGATAACCTGCAACCGGAAGTGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGcaac < 1:2296199/93‑1 (MQ=255)
aTGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGcaaca > 1:911811/1‑93 (MQ=255)
aTGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGcaaca > 2:1523310/1‑93 (MQ=255)
tgtgGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGcaacaa < 2:5793052/93‑1 (MQ=255)
gtggtgATGCTTAACGATAACCTGCAACCGGAAGGTCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAt < 1:6449307/93‑1 (MQ=255)
gtggtgATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAt < 1:1858411/93‑1 (MQ=255)
gtggtgATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAt > 1:246991/1‑93 (MQ=255)
gtggtgATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAt < 1:1032727/93‑1 (MQ=255)
tggtgATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAtg < 2:2899349/93‑1 (MQ=255)
tggtgATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAtg < 1:1605476/93‑1 (MQ=255)
tggtgATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAtg > 1:4258263/1‑93 (MQ=255)
ggtgATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGACTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAtgt > 1:1149357/1‑93 (MQ=255)
gATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTgcg > 2:6466271/1‑93 (MQ=255)
cTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCAtt < 1:1918024/93‑1 (MQ=255)
cTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCAtt < 2:5176758/93‑1 (MQ=255)
ttAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTg < 1:4156073/93‑1 (MQ=255)
ttAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTg > 1:1219682/1‑93 (MQ=255)
aaCGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGAc > 2:2797823/1‑93 (MQ=255)
aaCGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGAc < 2:5551552/93‑1 (MQ=255)
cGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGc < 2:5024155/93‑1 (MQ=255)
gATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGTATTGACGcc > 2:407575/1‑93 (MQ=255)
aTAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCt < 1:6440862/93‑1 (MQ=255)
aTAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCt < 1:2616529/93‑1 (MQ=255)
tAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCtt > 2:5967076/1‑93 (MQ=255)
caaCCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCtt < 1:2047098/92‑1 (MQ=255)
aCCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTg < 1:2583120/93‑1 (MQ=255)
aCCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTg > 2:5106889/1‑93 (MQ=255)
aCCTGCAACCGGAAGCGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTg < 1:2508593/93‑1 (MQ=255)
gCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCt > 2:5596237/1‑93 (MQ=255)
aaCCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGa < 1:5995255/93‑1 (MQ=255)
aCCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGaa > 1:3697781/1‑93 (MQ=255)
aCCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGaa > 2:3906264/1‑93 (MQ=255)
aCCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGaa > 2:3296016/1‑93 (MQ=255)
ccGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGaaa > 1:3661588/1‑93 (MQ=255)
cGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAg < 2:478444/93‑1 (MQ=255)
ggAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgc < 1:4463734/93‑1 (MQ=255)
ggAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgc > 1:1552511/1‑93 (MQ=255)
ggAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgc > 1:6180911/1‑93 (MQ=255)
ggAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgc < 2:182541/93‑1 (MQ=255)
gAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgcg > 2:6089957/1‑93 (MQ=255)
gAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgcg < 2:2704284/93‑1 (MQ=255)
gAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgcg > 1:1506385/1‑93 (MQ=255)
aaGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgcgc > 2:5319005/1‑93 (MQ=255)
aaGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgcgc < 1:2968050/93‑1 (MQ=255)
aaGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgcgc > 1:5627315/1‑93 (MQ=255)
aaGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAgccc > 2:4232597/1‑91 (MQ=255)
|
GGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGC > NC_000913/4444651‑4444830
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCT > NC_000913/4444648‑4444834
|
ctagaGCGCGCATCGTGGTGCACGATCTGCCTGAAAGCGCAGTAGGAGGCACCAGCGATGTGGTGATGCTTAACGATAGCCTGCAACCGGAAGG < SRR4302534.3464400/89‑1 (MQ=60)
CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGG > SRR4302534.1467445/1‑94 (MQ=60)
CTTGGGCGCGCATCGCGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGG < SRR4302534.690873/94‑1 (MQ=60)
TTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGG > SRR4302534.228728/1‑94 (MQ=60)
TTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGG < SRR4302534.1828935/94‑1 (MQ=60)
TGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGC < SRR4302534.5086966/94‑1 (MQ=60)
TGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGC < SRR4302534.1023712/94‑1 (MQ=60)
TGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGC > SRR4302534.734221/1‑94 (MQ=60)
TGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGC > SRR4302534.4956376/1‑94 (MQ=60)
GGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCC > SRR4302534.2665875/1‑94 (MQ=60)
CGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAA > SRR4302534.5929408/1‑94 (MQ=60)
CGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAA > SRR4302534.5339436/1‑94 (MQ=60)
GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACTATAACCTGCAACCGGAAGGGCCGAAAAC < SRR4302534.3464213/94‑1 (MQ=60)
GCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAAC < SRR4302534.4874917/94‑1 (MQ=60)
CATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACG > SRR4302534.5996019/1‑94 (MQ=60)
CATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACG < SRR4302534.3503661/94‑1 (MQ=60)
ATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGG > SRR4302534.3690868/1‑94 (MQ=60)
ATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGG > SRR4302534.6192735/1‑94 (MQ=60)
ATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGG < SRR4302534.1580679/94‑1 (MQ=60)
TCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAAGGATAACCTGCAACCGGACGGGCCGAAACCGGC > SRR4302534.1995748/1‑94 (MQ=60)
TCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATATCCTGCAACCGGAAGGGCCCAAACCGGC < SRR4302534.2782969/94‑1 (MQ=60)
TGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTC < SRR4302534.2047661/94‑1 (MQ=60)
TGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTC < SRR4302534.4885482/94‑1 (MQ=60)
GCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATT < SRR4302534.6379087/94‑1 (MQ=60)
GCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATT < SRR4302534.3896025/94‑1 (MQ=60)
GCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATT < SRR4302534.5246463/94‑1 (MQ=60)
CACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTC < SRR4302534.5590957/94‑1 (MQ=60)
ACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAACACGGCGTCGATTCC > SRR4302534.3600554/1‑94 (MQ=60)
ACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCC < SRR4302534.2055197/94‑1 (MQ=60)
ACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCC > SRR4302534.5004515/1‑94 (MQ=60)
CGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCG > SRR4302534.2185445/1‑94 (MQ=60)
GATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGA > SRR4302534.3405497/1‑94 (MQ=60)
ATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGAT > SRR4302534.4906062/1‑94 (MQ=60)
ATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGAT > SRR4302534.2431884/1‑94 (MQ=60)
ATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGAT > SRR4302534.168711/1‑94 (MQ=60)
ATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGAT > SRR4302534.3215894/1‑94 (MQ=60)
GCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGCTTAAC > SRR4302534.3448563/1‑94 (MQ=60)
CGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAG > SRR4302534.4838616/1‑94 (MQ=60)
CGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAG > SRR4302534.2621884/1‑94 (MQ=60)
CGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAG > SRR4302534.1660891/1‑94 (MQ=60)
GGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGT < SRR4302534.2296356/94‑1 (MQ=60)
GAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTA < SRR4302534.3164880/94‑1 (MQ=60)
GAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTA < SRR4302534.1374979/94‑1 (MQ=60)
GAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTA < SRR4302534.2223901/94‑1 (MQ=60)
AAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAA < SRR4302534.6392428/94‑1 (MQ=60)
AAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAA < SRR4302534.6544735/94‑1 (MQ=60)
AAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAA < SRR4302534.4695800/94‑1 (MQ=60)
AAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAAC > SRR4302534.4895318/1‑94 (MQ=60)
AGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACC < SRR4302534.5126117/94‑1 (MQ=60)
AGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACC > SRR4302534.6617445/1‑94 (MQ=60)
AGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACC < SRR4302534.1321750/94‑1 (MQ=60)
GCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCT < SRR4302534.1718093/94‑1 (MQ=60)
CGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTG > SRR4302534.303292/1‑94 (MQ=60)
CGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTG > SRR4302534.63391/1‑94 (MQ=60)
CGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTG < SRR4302534.5133999/94‑1 (MQ=60)
CGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTG < SRR4302534.2856116/94‑1 (MQ=60)
GCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA > SRR4302534.1435352/1‑94 (MQ=60)
AGTATGCGTCTCCAGAGATGTGGTGATTCTTAACTATGACCTGCAACCGGAAGGGCCGAAATCGGCGTCGATTCCGATTAACAGTAACCTGATT < SRR4302534.3602238/94‑1 (MQ=60)
AGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT < SRR4302534.1861/94‑1 (MQ=60)
AGTAGGCGACTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATT < SRR4302534.4202892/94‑1 (MQ=60)
GTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG < SRR4302534.1061006/94‑1 (MQ=60)
GTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG < SRR4302534.5409544/94‑1 (MQ=60)
TAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT > SRR4302534.1837865/1‑94 (MQ=60)
TAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT > SRR4302534.2951461/1‑94 (MQ=60)
TAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT < SRR4302534.5711452/94‑1 (MQ=60)
AGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTC > SRR4302534.6441028/1‑94 (MQ=60)
AGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTC > SRR4302534.2031579/1‑94 (MQ=60)
GGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCC > SRR4302534.951964/1‑94 (MQ=60)
GGCGTCTCCAGCGATGTGGGGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGGAACCTGATTGTCC > SRR4302534.4306389/1‑94 (MQ=60)
GCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCTTCGATTCCGATTAACAGTAACCTGATTGTCCA < SRR4302534.1975110/94‑1 (MQ=60)
GCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCA < SRR4302534.3018542/94‑1 (MQ=60)
GCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCA < SRR4302534.5494918/94‑1 (MQ=60)
GCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCA < SRR4302534.3792135/94‑1 (MQ=60)
GCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCA < SRR4302534.1565743/94‑1 (MQ=60)
GCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCA < SRR4302534.6275891/94‑1 (MQ=60)
CGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCAC < SRR4302534.3124808/94‑1 (MQ=60)
CGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCAC > SRR4302534.5919922/1‑94 (MQ=60)
CGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCAC > SRR4302534.4946570/1‑94 (MQ=60)
GTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACG > SRR4302534.2935936/1‑94 (MQ=60)
GTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACG > SRR4302534.1846460/1‑94 (MQ=60)
TCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACTTGATTGTCCACGT > SRR4302534.4114983/1‑94 (MQ=60)
TTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTT < SRR4302534.5136936/94‑1 (MQ=60)
CTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTT < SRR4302534.2075732/94‑1 (MQ=60)
CTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTT > SRR4302534.1614454/1‑94 (MQ=60)
CTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTT > SRR4302534.3714304/1‑94 (MQ=60)
CTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTT > SRR4302534.5251154/1‑94 (MQ=60)
TCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTG > SRR4302534.5021354/1‑94 (MQ=60)
TCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTG < SRR4302534.4290498/94‑1 (MQ=60)
GCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAA > SRR4302534.1752919/1‑94 (MQ=60)
CGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAAC > SRR4302534.2506061/1‑94 (MQ=60)
CGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAAC < SRR4302534.3043345/94‑1 (MQ=60)
GATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACA > SRR4302534.934995/1‑94 (MQ=60)
GATGTGGTGATGCTTAAAGATAACCTGCAACCGGAAGTGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACA < SRR4302534.2357146/94‑1 (MQ=60)
ATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAA < SRR4302534.1674801/94‑1 (MQ=60)
TGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAT > SRR4302534.253445/1‑94 (MQ=60)
TGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAT < SRR4302534.2571903/94‑1 (MQ=60)
TGTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAT < SRR4302534.5608526/94‑1 (MQ=60)
GTGGTGATGCTTAACGATAACCTGCAACCGGAAGGTCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATG < SRR4302534.6623110/94‑1 (MQ=60)
GTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATG > SRR4302534.4373224/1‑94 (MQ=60)
GTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATG < SRR4302534.1906790/94‑1 (MQ=60)
GTGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATG < SRR4302534.1059368/94‑1 (MQ=60)
TGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGT < SRR4302534.1647407/94‑1 (MQ=60)
TGGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGACTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGT > SRR4302534.1179485/1‑94 (MQ=60)
GGTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTG < SRR4302534.960159/94‑1 (MQ=60)
GTGATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGC < SRR4302534.2679247/94‑1 (MQ=60)
GATGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGC < SRR4302534.511727/94‑1 (MQ=60)
TGCTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCAT > SRR4302534.1428677/1‑94 (MQ=60)
CTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTG > SRR4302534.1251792/1‑94 (MQ=60)
CTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTG > SRR4302534.6133582/1‑94 (MQ=60)
CTTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTG < SRR4302534.1968163/94‑1 (MQ=60)
TTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGA < SRR4302534.4268289/94‑1 (MQ=60)
TTAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGA > SRR4302534.6636976/1‑94 (MQ=60)
TAACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTTCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGAC < SRR4302534.1596056/94‑1 (MQ=60)
AACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACG > SRR4302534.6353756/1‑94 (MQ=60)
ACGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGC > SRR4302534.1201195/1‑94 (MQ=60)
CGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCC > SRR4302534.3922896/1‑94 (MQ=60)
CGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCC > SRR4302534.4137703/1‑94 (MQ=60)
CGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCC < SRR4302534.619222/94‑1 (MQ=60)
CGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCC > SRR4302534.2560546/1‑94 (MQ=60)
CGATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCC < SRR4302534.2620552/94‑1 (MQ=60)
GATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCGGATTAACAGTAACATGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCT > SRR4302534.1283172/1‑94 (MQ=60)
GATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCT > SRR4302534.470955/1‑94 (MQ=60)
GATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCT > SRR4302534.2862828/1‑94 (MQ=60)
ATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTT < SRR4302534.6614440/94‑1 (MQ=60)
ATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTT < SRR4302534.6614441/94‑1 (MQ=60)
ATAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTT < SRR4302534.2685771/94‑1 (MQ=60)
TAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTT > SRR4302534.1910438/1‑94 (MQ=60)
TAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTT < SRR4302534.4526408/94‑1 (MQ=60)
TAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTT < SRR4302534.3723976/94‑1 (MQ=60)
CAACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTT < SRR4302534.2100597/94‑1 (MQ=60)
AACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTG > SRR4302534.582832/1‑94 (MQ=60)
AACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTG < SRR4302534.3293113/94‑1 (MQ=60)
ACCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGG < SRR4302534.2651504/94‑1 (MQ=60)
ACCTGCAACCGGAAGCGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGG < SRR4302534.2575205/94‑1 (MQ=60)
CCTGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGC > SRR4302534.2175878/1‑94 (MQ=60)
TGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCT < SRR4302534.3617182/94‑1 (MQ=60)
TGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCT > SRR4302534.5571825/1‑94 (MQ=60)
TGCAACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCT > SRR4302534.3574018/1‑94 (MQ=60)
AACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAA > SRR4302534.1196258/1‑94 (MQ=60)
AACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAA > SRR4302534.3797195/1‑94 (MQ=60)
AACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAA < SRR4302534.2274171/94‑1 (MQ=60)
AACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAA < SRR4302534.6158122/94‑1 (MQ=60)
AACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCCTTGGCCTGAA > SRR4302534.531453/1‑94 (MQ=60)
ACCGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAA > SRR4302534.3759996/1‑94 (MQ=60)
CGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGC > SRR4302534.3435431/1‑94 (MQ=60)
CGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGC > SRR4302534.4492331/1‑94 (MQ=60)
CGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGC > SRR4302534.1593179/1‑94 (MQ=60)
CGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGC > SRR4302534.2737643/1‑94 (MQ=60)
CGGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGC > SRR4302534.6349129/1‑94 (MQ=60)
GGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCG < SRR4302534.3268887/94‑1 (MQ=60)
GGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCG > SRR4302534.1546010/1‑94 (MQ=60)
GGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCG < SRR4302534.3784440/94‑1 (MQ=60)
GGAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCG < SRR4302534.4584431/94‑1 (MQ=60)
GAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGC > SRR4302534.5779605/1‑94 (MQ=60)
GAAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGC < SRR4302534.2971558/94‑1 (MQ=60)
AAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCG > SRR4302534.3507695/1‑94 (MQ=60)
AAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCG > SRR4302534.3664564/1‑94 (MQ=60)
AAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCG < SRR4302534.3045776/94‑1 (MQ=60)
AAGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCG > SRR4302534.1366026/1‑94 (MQ=60)
AGGGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGG > SRR4302534.4900364/1‑94 (MQ=60)
GGGCCGGAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTCGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGC > SRR4302534.831538/1‑94 (MQ=60)
GGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCT < SRR4302534.5275060/94‑1 (MQ=60)
GGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCT > SRR4302534.5364602/1‑94 (MQ=60)
GGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCT < SRR4302534.3420491/94‑1 (MQ=60)
|
CTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCT > NC_000913/4444648‑4444834
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |