Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,448,541 |
+C |
intergenic (+46/‑92) |
ytfQ → / → ytfR |
putative LACI‑type transcriptional regulator/YtfR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,448,541 | 1 | . | C | 100.0%
| 617.8
/ NA
| 208 | intergenic (+46/‑92) | ytfQ/ytfR | putative LACI‑type transcriptional regulator/YtfR |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (135/73); total (135/73) |
Only 100 of 230 total aligned reads displayed.
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑‑G‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448449‑4448623
|
aTACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCg > 1:957090/1‑93 (MQ=255)
tACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgc > 2:6166208/1‑92 (MQ=255)
tACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgc > 1:4895766/1‑92 (MQ=255)
aCCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgcg < 2:3563671/93‑3 (MQ=255)
ccGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgcgc < 2:2756755/93‑4 (MQ=255)
agaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGc > 1:3502656/1‑93 (MQ=37)
agaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGc > 1:5121479/1‑93 (MQ=37)
agaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGc > 1:3623063/1‑93 (MQ=37)
gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCg > 1:4730919/1‑93 (MQ=37)
gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCg > 2:5919096/1‑93 (MQ=37)
gaaTTAGAGAAGAAGAAAAATATGGGGAATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCg > 1:1407616/1‑93 (MQ=25)
aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGAt > 2:1532589/1‑93 (MQ=37)
aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGAt < 2:5306169/93‑1 (MQ=37)
tAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATgg < 1:1855677/93‑1 (MQ=37)
agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGt > 2:2805107/1‑93 (MQ=37)
gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTg > 2:4934388/1‑93 (MQ=37)
agaagaagaAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGc > 1:5829941/1‑93 (MQ=37)
agaagaagaAAAATAGGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGc < 2:2413753/93‑1 (MQ=25)
gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCa > 2:4089406/1‑93 (MQ=37)
aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCAc > 1:2750468/1‑93 (MQ=37)
agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACt > 2:5214200/1‑93 (MQ=37)
agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACt > 1:3163196/1‑93 (MQ=37)
gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTg > 1:345035/1‑93 (MQ=37)
agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGaa > 2:3467055/1‑93 (MQ=37)
gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAg > 1:370480/1‑93 (MQ=37)
aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGc > 2:5166983/1‑93 (MQ=37)
aaaaTATGGGGTATGGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGcc < 2:4569262/93‑1 (MQ=25)
aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTg > 2:609402/1‑93 (MQ=37)
aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTg < 2:2077199/93‑1 (MQ=37)
aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTg > 2:5739251/1‑93 (MQ=37)
atatGGGGTATGGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAGGGCGCTCGC‑GCCGCATCAGGCGATGGTGCACTGAAGCCTGa < 1:5015409/93‑1 (MQ=25)
tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGAt < 2:2542589/93‑1 (MQ=37)
atGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATg < 1:205331/93‑1 (MQ=37)
tGGTGTATTGAGGGTTGCTCTGCCTGATGCCGATCCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGc < 2:1432397/93‑1 (MQ=21)
gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACg > 1:3026522/1‑93 (MQ=25)
tATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGc < 2:1889237/93‑1 (MQ=25)
tATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGc > 1:6131709/1‑93 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 1:172718/1‑93 (MQ=25)
aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt < 2:1754872/93‑1 (MQ=25)
ttGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCtt < 1:5642075/93‑1 (MQ=25)
ttGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCtt > 2:3131807/1‑93 (MQ=25)
ttGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCtt > 2:4184617/1‑93 (MQ=25)
tcgAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCCCTGAAGCCTGATGCGACGCtt < 1:3257650/91‑1 (MQ=21)
tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa < 1:4174649/93‑1 (MQ=25)
gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc > 2:4162660/1‑93 (MQ=25)
aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGTATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc < 2:3752201/93‑1 (MQ=25)
aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGGGACGCGTagc > 1:5099783/1‑91 (MQ=21)
aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc < 1:4644018/93‑1 (MQ=25)
gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg > 2:2447480/1‑93 (MQ=25)
gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg > 1:2701183/1‑93 (MQ=25)
ggTTGCTATGCCTGATGCCGATTAGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgc > 2:2825740/1‑93 (MQ=25)
gTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgcg > 1:2513496/1‑93 (MQ=25)
ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt < 2:774639/93‑1 (MQ=25)
gCTATGCCTGATGCCGATTCGTAGGCTGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt > 2:6394915/1‑93 (MQ=21)
cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt > 1:5922490/1‑93 (MQ=25)
tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa > 2:5028851/1‑93 (MQ=25)
tATCCCTGATGCCCATTCGTAGGCCGGATAAGGCCCTCGCCC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa < 2:3594948/93‑1 (MQ=21)
aTGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt > 2:6313554/1‑93 (MQ=21)
aTGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt > 2:2005146/1‑93 (MQ=21)
tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc > 1:222789/1‑93 (MQ=21)
gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa > 1:4325677/1‑93 (MQ=21)
gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa > 2:3315186/1‑93 (MQ=21)
ccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAt < 2:3684017/93‑1 (MQ=21)
cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg > 1:1318856/1‑93 (MQ=21)
cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg > 1:5474899/1‑93 (MQ=21)
tGATGCCGATTCGTAGGCGGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc < 1:83956/93‑1 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 1:1022002/93‑1 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc > 2:3022217/1‑93 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 1:6010751/93‑1 (MQ=21)
gATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 1:4357177/93‑1 (MQ=21)
aTGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt < 2:4664065/93‑1 (MQ=21)
tGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTa > 2:1281497/1‑93 (MQ=21)
gCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc < 2:487827/93‑1 (MQ=21)
gCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc < 1:909479/93‑1 (MQ=21)
ccGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt < 1:3276984/93‑1 (MQ=21)
cGATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTg < 1:6213706/93‑1 (MQ=21)
gATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTgg > 1:4547515/1‑93 (MQ=21)
gATTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTgg > 2:5143517/1‑93 (MQ=21)
aTTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg < 2:1699976/93‑1 (MQ=18)
aTTCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg > 1:4146983/1‑93 (MQ=18)
ttCGTGGGCATGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa < 2:3750036/93‑1 (MQ=18)
ttCGTAGGCGGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa < 1:5573361/93‑1 (MQ=21)
ttCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa < 2:218188/93‑1 (MQ=21)
ttCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa > 1:513088/1‑93 (MQ=21)
tCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg < 2:1497504/93‑1 (MQ=21)
tCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg < 1:6054489/93‑1 (MQ=21)
tCGTAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg < 2:911382/93‑1 (MQ=21)
gTAGCCCGGATAAGGCCCCCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa < 2:4807328/93‑1 (MQ=21)
tAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc > 1:1236580/1‑93 (MQ=21)
tAGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc > 2:5401021/1‑93 (MQ=21)
aGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACg > 2:4768402/1‑93 (MQ=21)
aGGCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACg > 1:19335/1‑93 (MQ=21)
ggCCGGATAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGc > 2:1147612/1‑93 (MQ=21)
aTAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca > 1:6108957/1‑93 (MQ=25)
aTAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca > 1:2972150/1‑93 (MQ=25)
tAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac > 2:3197327/1‑93 (MQ=25)
tAAGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac < 1:1266728/93‑1 (MQ=25)
aaaGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac < 1:2420245/92‑1 (MQ=25)
aaGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc > 1:3668747/1‑93 (MQ=25)
aGGCGCTCGC‑GCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCg > 1:402262/1‑93 (MQ=25)
|
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑‑G‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448449‑4448623
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CG‑G‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448448‑4448623
|
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CG > SRR4302534.981466/1‑94 (MQ=60)
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CG‑C > SRR4302534.5028503/1‑94 (MQ=60)
ACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑C‑‑G‑‑C‑GC > SRR4302534.4435197/1‑94 (MQ=60)
CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccg > SRR4302534.470393/1‑89 (MQ=60)
CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccg > SRR4302534.1404943/1‑89 (MQ=60)
GCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgc > SRR4302534.6178774/1‑88 (MQ=60)
CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgca > SRR4302534.4352458/1‑87 (MQ=60)
CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgca > SRR4302534.2186039/1‑87 (MQ=60)
CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgca > SRR4302534.222791/1‑87 (MQ=60)
AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcat > SRR4302534.1471182/1‑86 (MQ=60)
AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcat > SRR4302534.3976532/1‑86 (MQ=60)
AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcatcc < SRR4302534.1855198/94‑11 (MQ=60)
AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcatcc > SRR4302534.1907575/1‑84 (MQ=60)
AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcatcc < SRR4302534.3046545/94‑11 (MQ=60)
GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGG < SRR4302534.2324401/94‑1 (MQ=60)
GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGG < SRR4302534.3312264/94‑1 (MQ=60)
AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGC > SRR4302534.3596878/1‑94 (MQ=60)
AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGC > SRR4302534.5259766/1‑94 (MQ=60)
AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGC > SRR4302534.3720465/1‑94 (MQ=60)
AGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCG > SRR4302534.4859387/1‑94 (MQ=60)
AGAATTAGAGAAGAAGAAAAATATGGGGAATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCG > SRR4302534.1444637/1‑94 (MQ=60)
AATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCTATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGAT > SRR4302534.3348640/1‑94 (MQ=60)
TAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGT < SRR4302534.1903967/94‑1 (MQ=60)
TAGAGAAAAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGT > SRR4302534.5505798/1‑94 (MQ=60)
AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTG < SRR4302534.466982/94‑1 (MQ=60)
AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTG > SRR4302534.5610520/1‑94 (MQ=60)
AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTG < SRR4302534.3091643/94‑1 (MQ=60)
AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTG > SRR4302534.812219/1‑94 (MQ=60)
GAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGC > SRR4302534.5988189/1‑94 (MQ=60)
GAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGC > SRR4302534.3434577/1‑94 (MQ=60)
AGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCA < SRR4302534.1717871/94‑1 (MQ=60)
AGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCA > SRR4302534.6281855/1‑94 (MQ=60)
GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCAC > SRR4302534.3967741/1‑94 (MQ=60)
GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCAC > SRR4302534.606812/1‑94 (MQ=60)
GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCAC > SRR4302534.2822926/1‑94 (MQ=60)
GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCAC > SRR4302534.2101904/1‑94 (MQ=60)
AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACT > SRR4302534.3246567/1‑94 (MQ=60)
AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTG > SRR4302534.353882/1‑94 (MQ=60)
AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTG > SRR4302534.4387516/1‑94 (MQ=60)
AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAG > SRR4302534.6236910/1‑94 (MQ=60)
AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAG > SRR4302534.379926/1‑94 (MQ=60)
AGAAAAATATGGGGTATAGAGGGTTGTTATGCTTGATCCGGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAG < SRR4302534.2714593/94‑1 (MQ=33)
AAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCC > SRR4302534.1321760/1‑94 (MQ=60)
AAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCC > SRR4302534.1273631/1‑94 (MQ=60)
AAAAATATGGGGTATTGAGGGTTCCTATCCCTGATGCCGATTCGTAGGCCGAATAGGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCC < SRR4302534.3600537/94‑1 (MQ=60)
AAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCT < SRR4302534.5257541/94‑1 (MQ=60)
AAAATAGGGGTTATGGAGGGTCGCTATGCCTGATGCCGATTCGTAGTCCGGATAGGGCGCTCGCG‑C‑‑C‑GCACCCGCCGATGGTGCACTGAAGCCT < SRR4302534.5738322/94‑1 (MQ=30)
AAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTG > SRR4302534.3595080/1‑94 (MQ=60)
ATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGAT > SRR4302534.4724424/1‑94 (MQ=60)
ATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGAT > SRR4302534.312827/1‑94 (MQ=60)
ATATGGGGTATGGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAGGGCGCTCGCG‑C‑‑C‑GCATCAGGCGATGGTGCACTGAAGCCTGAT < SRR4302534.5150944/94‑1 (MQ=60)
TATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATG > SRR4302534.4798409/1‑94 (MQ=60)
ATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGC < SRR4302534.210721/94‑1 (MQ=60)
ATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGC > SRR4302534.5201782/1‑94 (MQ=60)
TGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCG < SRR4302534.6072659/94‑1 (MQ=60)
TGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCG > SRR4302534.3795847/1‑94 (MQ=60)
GGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGAC < SRR4302534.1929746/94‑1 (MQ=60)
GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACG < SRR4302534.6189313/94‑1 (MQ=60)
GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACG > SRR4302534.3105847/1‑94 (MQ=60)
GTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGC > SRR4302534.6298508/1‑94 (MQ=60)
TATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCT > SRR4302534.177274/1‑94 (MQ=60)
ttgggggttgttTATGCCTGATGCCGATCCCGAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT < SRR4302534.4597428/82‑1 (MQ=39)
ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT > SRR4302534.597165/1‑94 (MQ=60)
ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT < SRR4302534.3662954/94‑1 (MQ=60)
TTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTA < SRR4302534.5794790/94‑1 (MQ=60)
TCGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCCCTGAAGCCTGATGCGACGCTTA < SRR4302534.3344404/94‑1 (MQ=60)
TGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAC < SRR4302534.4287415/94‑1 (MQ=60)
GAGGTTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC < SRR4302534.1435682/94‑1 (MQ=60)
GAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGGGACGCgtagc > SRR4302534.5237428/1‑89 (MQ=60)
GAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC > SRR4302534.4534177/1‑94 (MQ=60)
GAGGGTTGCTATGCCTGATGCCGATCCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC > SRR4302534.5266993/1‑94 (MQ=60)
AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG < SRR4302534.4770075/94‑1 (MQ=60)
AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG > SRR4302534.2772537/1‑94 (MQ=60)
GGTTTGCTATGCCTGATGCCGATTGGTAGGCGGAAGAAGGCGCTCGCG‑C‑‑C‑GCACCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGC < SRR4302534.5654100/94‑1 (MQ=54)
GGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGC > SRR4302534.2632764/1‑94 (MQ=60)
GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG > SRR4302534.2580228/1‑94 (MQ=60)
GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG < SRR4302534.912091/94‑1 (MQ=60)
GTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGT > SRR4302534.2357129/1‑94 (MQ=60)
TGATATGCCTGTTGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCT < SRR4302534.712143/94‑1 (MQ=60)
GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT > SRR4302534.6083296/1‑94 (MQ=60)
GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT > SRR4302534.5078855/1‑94 (MQ=60)
TATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAT < SRR4302534.404559/94‑1 (MQ=60)
ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC > SRR4302534.228621/1‑94 (MQ=60)
TGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA > SRR4302534.4442703/1‑94 (MQ=60)
TGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA > SRR4302534.4240122/1‑94 (MQ=60)
gcttgtcgcgGATTCGTAGGCCGTATAAGGCGCT‑‑CG‑GGCC‑GCTTCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT < SRR4302534.1446852/84‑1 (MQ=60)
GCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT < SRR4302534.2822973/94‑1 (MQ=60)
CCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG > SRR4302534.1353633/1‑94 (MQ=60)
CCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG > SRR4302534.5622520/1‑94 (MQ=60)
CCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG > SRR4302534.6258129/1‑94 (MQ=60)
CCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG < SRR4302534.1844217/94‑1 (MQ=60)
CTTATCCCGATTCGTAGGCCGGATAAGCCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC < SRR4302534.3877323/94‑1 (MQ=60)
CTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC > SRR4302534.52099/1‑94 (MQ=60)
ATGATGCCGATTCGTAGGCGGGATAGGGCGCT‑‑CGCG‑‑CGGCATCGGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC < SRR4302534.2549783/94‑1 (MQ=60)
TGATGCCGATTCGTAGGCGGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC < SRR4302534.86198/94‑1 (MQ=60)
GATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT < SRR4302534.6174060/94‑1 (MQ=60)
GATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT < SRR4302534.4474756/94‑1 (MQ=60)
GATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT > SRR4302534.6371196/1‑94 (MQ=60)
GATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT < SRR4302534.1048318/94‑1 (MQ=60)
ATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA > SRR4302534.5820187/1‑94 (MQ=60)
ATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA > SRR4302534.5778636/1‑94 (MQ=60)
TGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAC < SRR4302534.3750814/94‑1 (MQ=60)
GCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT < SRR4302534.932595/94‑1 (MQ=60)
CCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG < SRR4302534.3364318/94‑1 (MQ=60)
CGATTCGTAGGCCGGATAGGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG < SRR4302534.3563673/94‑1 (MQ=60)
CGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG > SRR4302534.4670798/1‑94 (MQ=60)
CGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG > SRR4302534.1361711/1‑94 (MQ=60)
CGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG < SRR4302534.6382548/94‑1 (MQ=60)
CGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG > SRR4302534.5021492/1‑94 (MQ=60)
GATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG < SRR4302534.2803781/94‑1 (MQ=60)
GATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG > SRR4302534.4258931/1‑94 (MQ=60)
GATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG > SRR4302534.3336976/1‑94 (MQ=60)
ATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGA > SRR4302534.525861/1‑94 (MQ=60)
TTCGTAGGCGGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG < SRR4302534.5723880/94‑1 (MQ=60)
TCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGC < SRR4302534.6219132/94‑1 (MQ=60)
CGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCA > SRR4302534.2967034/1‑94 (MQ=60)
GTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC > SRR4302534.4262910/1‑94 (MQ=60)
GTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC > SRR4302534.1269172/1‑94 (MQ=60)
TAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACG > SRR4302534.19845/1‑94 (MQ=60)
TAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACG > SRR4302534.3270584/1‑94 (MQ=60)
CCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTT > SRR4302534.1944151/1‑94 (MQ=60)
CCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTT < SRR4302534.2469762/94‑1 (MQ=60)
GATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACA > SRR4302534.962075/1‑94 (MQ=60)
GATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACA > SRR4302534.6275090/1‑94 (MQ=60)
GATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACA > SRR4302534.3049971/1‑94 (MQ=60)
TAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC > SRR4302534.1083567/1‑94 (MQ=60)
TAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC > SRR4302534.3767366/1‑94 (MQ=60)
TAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC < SRR4302534.1300088/94‑1 (MQ=60)
AAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > SRR4302534.2157054/1‑94 (MQ=60)
AAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > SRR4302534.412545/1‑94 (MQ=60)
AAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG < SRR4302534.4461810/94‑1 (MQ=60)
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GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CG‑G‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448448‑4448623
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
