Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 884 257.2 12958910 96.9% 12557183 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,449,738 +G coding (1106/1254 nt) ytfR → YtfR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,449,7371.G99.6% 916.6 / ‑4.0 261coding (1105/1254 nt)ytfRYtfR
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base G (120/140);  total (121/140)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01

Only 100 of 282 total aligned reads displayed.

GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACA  >  NC_000913/4449645‑4449824
                                                                                             |                                                                                       
 cTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑g                                                                                        >  2:389524/1‑93 (MQ=255)
  ttCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑gg                                                                                       >  2:111382/1‑92 (MQ=255)
   tCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑ggc                                                                                      <  2:1292151/93‑3 (MQ=255)
    cTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑ggct                                                                                     <  2:5820242/93‑4 (MQ=255)
    cTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGgct‑ggct                                                                                     >  2:4355565/1‑90 (MQ=255)
        ccGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCGCAGCGCGGCTGGCTACGt                                                                                  >  2:6111949/1‑93 (MQ=255)
        ccGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGt                                                                                  <  1:5262470/93‑1 (MQ=255)
           gAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTccc                                                                               >  1:2037985/1‑93 (MQ=255)
           gAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTccc                                                                               >  1:2759965/1‑93 (MQ=255)
           gAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGAAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTccc                                                                               <  1:5158401/93‑1 (MQ=255)
            aaGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCa                                                                              <  1:5904468/93‑1 (MQ=255)
            aaGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCa                                                                              <  1:4867103/93‑1 (MQ=255)
             aGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCAt                                                                             <  2:911881/93‑1 (MQ=255)
             aGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCAt                                                                             >  2:4020067/1‑93 (MQ=255)
             aGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCAt                                                                             >  2:268410/1‑93 (MQ=255)
             aGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCAt                                                                             <  1:2328586/93‑1 (MQ=255)
               aCAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCAttt                                                                           <  2:5291546/93‑1 (MQ=255)
                cAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTc                                                                          >  1:880591/1‑93 (MQ=255)
                  ggAAAACCTATGGCATCATAGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTccc                                                                        >  1:6324914/1‑93 (MQ=255)
                  ggAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTccc                                                                        >  1:2616017/1‑93 (MQ=255)
                  ggAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTccc                                                                        >  2:5606630/1‑93 (MQ=255)
                     aaaCCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCa                                                                     <  2:2300017/93‑1 (MQ=255)
                     aaaCCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCa                                                                     <  1:3522087/93‑1 (MQ=255)
                       aCCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCaaa                                                                   >  2:2839232/1‑93 (MQ=255)
                       aCCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCaaa                                                                   >  2:2632421/1‑93 (MQ=255)
                        ccGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCCAAg                                                                  >  2:4488589/1‑93 (MQ=255)
                        ccGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAg                                                                  >  2:5420020/1‑93 (MQ=255)
                          gATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGaa                                                                <  2:79393/93‑1 (MQ=255)
                          gATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGaa                                                                >  1:509598/1‑93 (MQ=255)
                           aTGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAAc                                                               <  1:6011214/93‑1 (MQ=255)
                           aTGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAAc                                                               <  1:3360094/93‑1 (MQ=255)
                             ggCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAg                                                             >  1:6211297/1‑93 (MQ=255)
                               catcatCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCa                                                           >  1:4374485/1‑93 (MQ=255)
                               catcatCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCa                                                           <  1:4906968/93‑1 (MQ=255)
                                atcatcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCaa                                                          <  2:5711474/93‑1 (MQ=255)
                                  catcGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAaga                                                        <  2:504123/93‑1 (MQ=255)
                                        tGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGc                                                  <  1:341936/93‑1 (MQ=255)
                                         gccgccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGcc                                                 <  2:6372261/93‑1 (MQ=255)
                                          ccgccTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCg                                                >  1:4772020/1‑93 (MQ=255)
                                              cTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACg                                            >  2:3348455/1‑93 (MQ=255)
                                               tCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGc                                           <  1:4496954/93‑1 (MQ=255)
                                                cGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCt                                          >  1:959075/1‑93 (MQ=255)
                                                 ggTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCtt                                         <  2:5460613/93‑1 (MQ=255)
                                                  gTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGCACGCttt                                        >  1:3229201/1‑93 (MQ=255)
                                                  gTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCttt                                        <  2:3069073/93‑1 (MQ=255)
                                                  gTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCttt                                        <  2:5994018/93‑1 (MQ=255)
                                                  gTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCttt                                        <  2:3491948/93‑1 (MQ=255)
                                                   tGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTa                                       >  1:1271787/1‑93 (MQ=255)
                                                    tcGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTAt                                      <  1:5481649/92‑1 (MQ=255)
                                                    gCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTAt                                      <  1:2161897/93‑1 (MQ=255)
                                                    gCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTAt                                      >  2:5469631/1‑93 (MQ=255)
                                                      gggAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATcc                                    <  2:163691/93‑1 (MQ=255)
                                                      gggAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATcc                                    <  1:3131422/93‑1 (MQ=255)
                                                       ggAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATccc                                   >  1:2528043/1‑92 (MQ=255)
                                                       ggAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCg                                   >  2:2180020/1‑93 (MQ=255)
                                                         aaaaTATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGcc                                 <  1:1655539/93‑1 (MQ=255)
                                                            atatCATCCTCGCTCTCCAGGCCCAGCGCGTCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGc                              <  2:3200152/93‑1 (MQ=255)
                                                            atatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGc                              >  1:3701711/1‑93 (MQ=255)
                                                            atatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGc                              <  1:1824152/93‑1 (MQ=255)
                                                             tatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCt                             >  2:4209463/1‑93 (MQ=255)
                                                             tatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCt                             <  2:1783481/93‑1 (MQ=255)
                                                             tatCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCt                             >  1:6434927/1‑93 (MQ=255)
                                                              atcatcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCtt                            <  1:1035301/93‑1 (MQ=255)
                                                               tcatcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTg                           >  1:3338685/1‑93 (MQ=255)
                                                                 atcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGc                         >  1:4941549/1‑93 (MQ=255)
                                                                 atcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGc                         >  1:4134178/1‑93 (MQ=255)
                                                                 atcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGc                         >  2:3795626/1‑93 (MQ=255)
                                                                  tcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCa                        <  2:471013/93‑1 (MQ=255)
                                                                  tcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCa                        >  1:2932540/1‑93 (MQ=255)
                                                                  tcCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCa                        >  2:1512551/1‑93 (MQ=255)
                                                                   ccTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCAt                       <  1:674843/93‑1 (MQ=255)
                                                                    cTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCAtt                      <  1:2070460/93‑1 (MQ=255)
                                                                    cTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCAtt                      >  2:479139/1‑93 (MQ=255)
                                                                    cTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCAtt                      <  2:4742065/93‑1 (MQ=255)
                                                                      cGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCg                    >  2:4087652/1‑93 (MQ=255)
                                                                      cGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCg                    >  1:3781343/1‑93 (MQ=255)
                                                                       gCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGc                   >  2:4777038/1‑93 (MQ=255)
                                                                           tcCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCacac               >  2:1836987/1‑93 (MQ=255)
                                                                            ccAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACAcc              >  2:5119593/1‑93 (MQ=255)
                                                                            ccAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACAcc              >  2:2382982/1‑93 (MQ=255)
                                                                            ccAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACAcc              <  1:4697832/93‑1 (MQ=255)
                                                                            ccAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCATTATCCGCCAGCTTGGCATTCGCACAcc              >  2:5892867/1‑93 (MQ=255)
                                                                             cAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCt             <  1:5217547/93‑1 (MQ=255)
                                                                              aGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCtt            <  2:6015762/93‑1 (MQ=255)
                                                                              aGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCtt            <  2:1695971/93‑1 (MQ=255)
                                                                              aGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCtt            >  1:5617990/1‑93 (MQ=255)
                                                                               ggCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTc           >  2:1322963/1‑93 (MQ=255)
                                                                               ggCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTc           <  1:3657693/93‑1 (MQ=255)
                                                                               ggCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTc           >  2:5887593/1‑93 (MQ=255)
                                                                               ggCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTc           >  1:1454761/1‑93 (MQ=255)
                                                                                  ccAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAAc        <  2:493537/93‑1 (MQ=255)
                                                                                  ccAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAAc        >  1:1582734/1‑93 (MQ=255)
                                                                                   cAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACt       <  1:5763334/93‑1 (MQ=255)
                                                                                   cAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACt       <  2:2949360/93‑1 (MQ=255)
                                                                                    aGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTg      >  1:6089937/1‑93 (MQ=255)
                                                                                    aGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTg      <  2:3183762/93‑1 (MQ=255)
                                                                                     gcgcGGCTGGCTACGTCCCATTTCCCGCAAAGACCAGCAGAAGATGGCGAAACGCTTTTTCCGCCGCCTGGGCTTTCGCCCACCTCCAACTGa     >  2:5571163/1‑93 (MQ=255)
                                                                                      cgcgGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGaa    <  1:3061423/93‑1 (MQ=255)
                                                                                       gcgGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGaac   <  1:4060472/93‑1 (MQ=255)
                                                                                       gcgGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGaac   <  2:2073153/93‑1 (MQ=255)
                                                                                             |                                                                                       
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCT‑GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACA  >  NC_000913/4449645‑4449824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑T‑GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATT  >  NC_000913/4449645‑4449831
                                                                                               |                                                                                             
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑T‑G                                                                                               <  SRR4302534.4177286/94‑1 (MQ=60)
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑T‑G                                                                                               <  SRR4302534.5204257/94‑1 (MQ=60)
 CTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑T‑GG                                                                                              >  SRR4302534.3069926/1‑94 (MQ=60)
    CTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTA                                                                                            <  SRR4302534.4611050/94‑1 (MQ=60)
     TGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTAC                                                                                           >  SRR4302534.5047028/1‑94 (MQ=60)
     TGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTAC                                                                                           <  SRR4302534.6180342/94‑1 (MQ=60)
     TGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTAC                                                                                           <  SRR4302534.6209614/94‑1 (MQ=60)
     TGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTAC                                                                                           <  SRR4302534.6441930/94‑1 (MQ=60)
      GCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACG                                                                                          <  SRR4302534.6457415/94‑1 (MQ=60)
        CCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTC                                                                                        <  SRR4302534.5404635/94‑1 (MQ=60)
        CCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTC                                                                                        <  SRR4302534.444873/94‑1 (MQ=60)
          TGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCC                                                                                      >  SRR4302534.1668581/1‑94 (MQ=60)
          GGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCC                                                                                      <  SRR4302534.1384548/94‑1 (MQ=60)
          GGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCC                                                                                      >  SRR4302534.2832667/1‑94 (MQ=60)
          GGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCC                                                                                      >  SRR4302534.2091277/1‑94 (MQ=60)
           GAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGAAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCA                                                                                     <  SRR4302534.5297486/94‑1 (MQ=60)
            AAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCAT                                                                                    <  SRR4302534.4999127/94‑1 (MQ=60)
            AAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCAT                                                                                    <  SRR4302534.6064776/94‑1 (MQ=60)
            AAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCAT                                                                                    >  SRR4302534.658175/1‑94 (MQ=60)
             AGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATT                                                                                   <  SRR4302534.2390375/94‑1 (MQ=60)
              GACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTT                                                                                  <  SRR4302534.1508613/94‑1 (MQ=60)
               ACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTC                                                                                 >  SRR4302534.902859/1‑94 (MQ=60)
                 AGGAAAACCTATGGCATCATAGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCC                                                                               >  SRR4302534.6495797/1‑94 (MQ=60)
                 AGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCC                                                                               >  SRR4302534.1916843/1‑94 (MQ=60)
                 AGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCC                                                                               >  SRR4302534.2685246/1‑94 (MQ=60)
                  GGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCG                                                                              <  SRR4302534.4926146/94‑1 (MQ=60)
                   GAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGC                                                                             >  SRR4302534.5011396/1‑94 (MQ=60)
                    AAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCA                                                                            >  SRR4302534.3760810/1‑94 (MQ=60)
                     AAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAA                                                                           <  SRR4302534.3616823/94‑1 (MQ=60)
                        CCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGA                                                                        <  SRR4302534.968103/94‑1 (MQ=60)
                         CGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAA                                                                       >  SRR4302534.522284/1‑94 (MQ=60)
                          GATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAAC                                                                      >  SRR4302534.3764895/1‑94 (MQ=60)
                          GATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAAA                                                                      >  SRR4302534.5101508/1‑94 (MQ=60)
                           ATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACA                                                                     <  SRR4302534.6174542/94‑1 (MQ=60)
                           ATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACA                                                                     <  SRR4302534.3450089/94‑1 (MQ=60)
                           ATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACA                                                                     >  SRR4302534.4960339/1‑94 (MQ=60)
                            TGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAG                                                                    >  SRR4302534.6093232/1‑94 (MQ=60)
                            TGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAG                                                                    >  SRR4302534.3300050/1‑94 (MQ=60)
                            TGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAG                                                                    >  SRR4302534.6380101/1‑94 (MQ=60)
                              GCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCA                                                                  >  SRR4302534.4492389/1‑94 (MQ=60)
                              GCATAATCGCTGCCGCCCCGGTGCGGGAAAATATAATACCAGCTCTCCAGGCCCAGCGCGGC‑T‑Ggctaggtccgcattgccgcaaagcacagca                                                                 >  SRR4302534.5485375/1‑64 (MQ=32)
                               CATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAA                                                                 <  SRR4302534.5039985/94‑1 (MQ=60)
                                ATCATCGCTGCCGGCTCGGTGCGGGAAAATATCATCCTCGCTCTCCACGCCCAGCCCGGC‑TGGTTACGCGCCCTTTCCCGCAAAGAACAGCCAG                                                                >  SRR4302534.5909061/1‑94 (MQ=50)
                                 TCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGA                                                               <  SRR4302534.3318730/94‑1 (MQ=60)
                                 TCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGA                                                               <  SRR4302534.3549713/94‑1 (MQ=60)
                                   ATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGA                                                             <  SRR4302534.1310148/94‑1 (MQ=60)
                                   ATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGA                                                             >  SRR4302534.3465914/1‑94 (MQ=60)
                                   ATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGA                                                             <  SRR4302534.2198941/94‑1 (MQ=60)
                                    TCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGAT                                                            <  SRR4302534.822589/94‑1 (MQ=60)
                                     CGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATT                                                           <  SRR4302534.2377266/94‑1 (MQ=60)
                                      GCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTG                                                          <  SRR4302534.2987223/94‑1 (MQ=60)
                                       CCGCCGCCTCGGTGCGCACAAATATCACCCGCGCTCTCCAGGCACAGCCCGGC‑TGGCTACGTCCCATTTCCCGCACAGAAAAGCAAGAGATTGC                                                         <  SRR4302534.3595720/94‑1 (MQ=32)
                                        TGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCC                                                        <  SRR4302534.350682/94‑1 (MQ=60)
                                        TGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCC                                                        <  SRR4302534.4855790/94‑1 (MQ=60)
                                         GCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCG                                                       >  SRR4302534.4901588/1‑94 (MQ=60)
                                          CCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAGCAGCAAGAGATTGCCGA                                                      <  SRR4302534.3184254/94‑1 (MQ=60)
                                          CCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGA                                                      <  SRR4302534.185587/94‑1 (MQ=60)
                                            GCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAAC                                                    <  SRR4302534.2726415/94‑1 (MQ=60)
                                             CCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACG                                                   <  SRR4302534.1849165/94‑1 (MQ=60)
                                             CCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACG                                                   <  SRR4302534.960129/94‑1 (MQ=60)
                                             CCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACG                                                   <  SRR4302534.4008722/94‑1 (MQ=60)
                                              CTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGC                                                  <  SRR4302534.3433793/94‑1 (MQ=60)
                                              CTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGC                                                  <  SRR4302534.422256/94‑1 (MQ=60)
                                               TCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCT                                                 <  SRR4302534.4864091/94‑1 (MQ=60)
                                               TCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCT                                                 >  SRR4302534.983510/1‑94 (MQ=60)
                                               TCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCT                                                 <  SRR4302534.4618653/94‑1 (MQ=60)
                                                CGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTT                                                >  SRR4302534.3188506/1‑94 (MQ=60)
                                                CGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTT                                                <  SRR4302534.838356/94‑1 (MQ=60)
                                                 GGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGCACGCTTT                                               >  SRR4302534.3315010/1‑94 (MQ=60)
                                                 GGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTT                                               >  SRR4302534.5041732/1‑94 (MQ=60)
                                                 GGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTT                                               <  SRR4302534.411191/94‑1 (MQ=60)
                                                 GGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTT                                               <  SRR4302534.5368014/94‑1 (MQ=60)
                                                 GGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTT                                               >  SRR4302534.3027804/1‑94 (MQ=60)
                                                  GTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTA                                              >  SRR4302534.1305271/1‑94 (MQ=60)
                                                  GTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTA                                              <  SRR4302534.2905781/94‑1 (MQ=60)
                                                    TCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATC                                            <  SRR4302534.5629473/94‑1 (MQ=60)
                                                    GCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATC                                            <  SRR4302534.2219000/94‑1 (MQ=60)
                                                    GCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATC                                            >  SRR4302534.1674093/1‑94 (MQ=60)
                                                    GCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATC                                            <  SRR4302534.5010085/94‑1 (MQ=60)
                                                     CGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTT‑GCTACGTCCCATTTCCCGCAAAGAACAACAAGAGAATGTCGAACGCTTTATCC                                           >  SRR4302534.6323699/1‑94 (MQ=60)
                                                     CGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCC                                           >  SRR4302534.593776/1‑94 (MQ=60)
                                                     CGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCC                                           >  SRR4302534.2100191/1‑94 (MQ=60)
                                                      GGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCG                                          <  SRR4302534.3213739/94‑1 (MQ=60)
                                                      GGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCC                                          >  SRR4302534.2595128/1‑94 (MQ=60)
                                                         AAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCA                                       <  SRR4302534.1698683/94‑1 (MQ=60)
                                                          AAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAG                                      >  SRR4302534.2468439/1‑94 (MQ=60)
                                                           AATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCCTTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGC                                     >  SRR4302534.428805/1‑94 (MQ=60)
                                                           AATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGC                                     <  SRR4302534.321981/94‑1 (MQ=60)
                                                           AATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGC                                     >  SRR4302534.3801214/1‑94 (MQ=60)
                                                            ATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCT                                    >  SRR4302534.6608383/1‑94 (MQ=60)
                                                            ATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCT                                    <  SRR4302534.1871590/94‑1 (MQ=60)
                                                            ATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCT                                    >  SRR4302534.676329/1‑94 (MQ=60)
                                                            ATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCT                                    <  SRR4302534.2620710/94‑1 (MQ=60)
                                                             TATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTT                                   <  SRR4302534.229845/94‑1 (MQ=60)
                                                             TATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTT                                   >  SRR4302534.2192327/1‑94 (MQ=60)
                                                              ATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTG                                  >  SRR4302534.5728501/1‑94 (MQ=60)
                                                              ATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTG                                  <  SRR4302534.5351312/94‑1 (MQ=60)
                                                              ATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTG                                  <  SRR4302534.1062019/94‑1 (MQ=60)
                                                              ATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTG                                  >  SRR4302534.3428009/1‑94 (MQ=60)
                                                              ATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTG                                  <  SRR4302534.3445102/94‑1 (MQ=60)
                                                                CATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGC                                >  SRR4302534.5075437/1‑94 (MQ=60)
                                                                CATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGC                                >  SRR4302534.4245679/1‑94 (MQ=60)
                                                                CATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGC                                >  SRR4302534.5071490/1‑94 (MQ=60)
                                                                 ATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCA                               >  SRR4302534.5285063/1‑94 (MQ=60)
                                                                 ATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCA                               >  SRR4302534.3009519/1‑94 (MQ=60)
                                                                 ATCCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCA                               <  SRR4302534.3824079/94‑1 (MQ=60)
                                                                   CCTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATT                             <  SRR4302534.691299/94‑1 (MQ=60)
                                                                    CTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTC                            <  SRR4302534.2124616/94‑1 (MQ=60)
                                                                    CTCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCGTTATCCGCCAGCTTGGCATTC                            >  SRR4302534.3619889/1‑94 (MQ=60)
                                                                     TCGCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCG                           >  SRR4302534.3882867/1‑94 (MQ=60)
                                                                       GCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCA                         <  SRR4302534.6109720/94‑1 (MQ=60)
                                                                       GCTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCA                         <  SRR4302534.2396142/94‑1 (MQ=60)
                                                                        CTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCAC                        >  SRR4302534.1152516/1‑94 (MQ=60)
                                                                        CTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCAC                        <  SRR4302534.2667148/94‑1 (MQ=60)
                                                                        CTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCAC                        >  SRR4302534.5304009/1‑94 (MQ=60)
                                                                        CTCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCAGCCAGCTTGGCATTCGCAC                        >  SRR4302534.6277987/1‑94 (MQ=60)
                                                                         TCTCCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACA                       <  SRR4302534.5433505/94‑1 (MQ=60)
                                                                            CCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCT                    <  SRR4302534.4825345/94‑1 (MQ=60)
                                                                            CCAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCT                    <  SRR4302534.2111966/94‑1 (MQ=60)
                                                                             CAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT                   <  SRR4302534.5512831/94‑1 (MQ=60)
                                                                             CAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT                   >  SRR4302534.995122/1‑94 (MQ=60)
                                                                             CAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT                   <  SRR4302534.5358373/94‑1 (MQ=60)
                                                                             CAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT                   <  SRR4302534.3483730/94‑1 (MQ=60)
                                                                             CAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT                   >  SRR4302534.5769997/1‑94 (MQ=60)
                                                                             CAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT                   >  SRR4302534.3635368/1‑94 (MQ=60)
                                                                             CAGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTT                   >  SRR4302534.5948039/1‑94 (MQ=60)
                                                                              AGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTC                  >  SRR4302534.1493023/1‑94 (MQ=60)
                                                                              AGGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTC                  >  SRR4302534.4441575/1‑94 (MQ=60)
                                                                               GGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGGAAGAGATTGCCGCACGCTTTATTCGCCAGGTTCGAATTCGCACACCTTCA                 >  SRR4302534.3547134/1‑94 (MQ=60)
                                                                               GGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCA                 <  SRR4302534.3589627/94‑1 (MQ=60)
                                                                               GGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCA                 <  SRR4302534.6612062/94‑1 (MQ=60)
                                                                               GGCCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCA                 <  SRR4302534.3756001/94‑1 (MQ=60)
                                                                                 CCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAAC               <  SRR4302534.1495119/94‑1 (MQ=60)
                                                                                 CCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAAC               >  SRR4302534.1624131/1‑94 (MQ=60)
                                                                                 CCCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCAGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAAC               <  SRR4302534.5387666/94‑1 (MQ=60)
                                                                                  CCAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATTCGCCAGCTTGGCATTCGCACACCTTCAACT              >  SRR4302534.4822474/1‑94 (MQ=60)
                                                                                   CAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTG             <  SRR4302534.5919688/94‑1 (MQ=60)
                                                                                   CAGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTG             >  SRR4302534.6255552/1‑94 (MQ=60)
                                                                                    AGCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGA            <  SRR4302534.4559393/94‑1 (MQ=60)
                                                                                     GCGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAA           <  SRR4302534.5638790/94‑1 (MQ=60)
                                                                                      CGCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAAC          <  SRR4302534.3141768/94‑1 (MQ=60)
                                                                                       GCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACA         <  SRR4302534.4169388/94‑1 (MQ=60)
                                                                                       GCGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACA         <  SRR4302534.641648/94‑1 (MQ=60)
                                                                                        CGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAA        >  SRR4302534.69124/1‑94 (MQ=60)
                                                                                        CGGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAA        >  SRR4302534.3963737/1‑94 (MQ=60)
                                                                                         GGC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAAC       >  SRR4302534.2967707/1‑94 (MQ=60)
                                                                                          GC‑TGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACC      <  SRR4302534.1714211/94‑1 (MQ=60)
                                                                                             G‑GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGAT   >  SRR4302534.1272083/1‑94 (MQ=60)
                                                                                             G‑GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGAT   <  SRR4302534.6261380/94‑1 (MQ=60)
                                                                                               GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATT  <  SRR4302534.1008000/94‑1 (MQ=60)
                                                                                               |                                                                                             
GCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGC‑T‑GCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATT  >  NC_000913/4449645‑4449831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑