Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,618,604 |
T→C |
G51G (GGT→GGC) |
deoD → |
purine‑nucleoside phosphorylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,618,604 | 0 | T | C | 100.0%
| 786.2
/ NA
| 223 | G51G (GGT→GGC) | deoD | purine‑nucleoside phosphorylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (93/130); total (93/130) |
Only 100 of 225 total aligned reads displayed.
CGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTT > NC_000913/4618514‑4618693
|
cGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCAc < 2:2014111/93‑1 (MQ=255)
gACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACt < 2:3751911/93‑1 (MQ=255)
aCCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACtt > 2:5673673/1‑93 (MQ=255)
cccGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTa > 2:1199848/1‑93 (MQ=255)
cccGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTa < 1:4111673/93‑1 (MQ=255)
ccGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTAc > 2:4735395/1‑93 (MQ=255)
ccGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTAc < 1:2738361/93‑1 (MQ=255)
gCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaa > 2:3612887/1‑93 (MQ=255)
gCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaa > 1:5615244/1‑93 (MQ=255)
gCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaa > 2:6151612/1‑93 (MQ=255)
gCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGACCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCAGTTACaa > 1:3460210/1‑93 (MQ=255)
gCTGCGGGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaa < 1:1821901/93‑1 (MQ=255)
cTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaaa < 2:6368052/93‑1 (MQ=255)
cTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaaa < 1:5287785/93‑1 (MQ=255)
cTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACaaa < 2:4247751/93‑1 (MQ=255)
gcgtgcgAAGTATATTGCTGAACCTTTCCTTGAAGATGCCTGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAgg < 1:5460152/93‑1 (MQ=255)
gcgtgcgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAgg > 1:1629886/1‑93 (MQ=255)
gcgtgcgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAgg < 1:829198/93‑1 (MQ=255)
gtgcgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGcc > 2:163633/1‑93 (MQ=255)
gtgcgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGcc < 2:4285145/93‑1 (MQ=255)
cgAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCa < 1:4389318/93‑1 (MQ=255)
gAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaa > 2:4929335/1‑93 (MQ=255)
gAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaa > 2:2447343/1‑93 (MQ=255)
gAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaa > 2:3805078/1‑93 (MQ=255)
gAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaa > 1:4220402/1‑93 (MQ=255)
aaGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaaa > 1:1368889/1‑93 (MQ=255)
aGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCaaaa > 2:2651723/1‑93 (MQ=255)
gTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAAt < 2:4122293/93‑1 (MQ=255)
tatTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTc < 1:6195661/93‑1 (MQ=255)
atTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTcc < 1:5375152/93‑1 (MQ=255)
tGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGt > 1:4368481/1‑93 (MQ=255)
gCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAGAGGCCGCAAAATTTCCGTa < 1:5911002/93‑1 (MQ=255)
gCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTa > 2:5076943/1‑93 (MQ=255)
tGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAt > 2:5417943/1‑93 (MQ=255)
tGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAAt < 2:1940667/93‑1 (MQ=255)
gAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATg > 2:5558008/1‑93 (MQ=255)
gAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATg < 2:5641001/93‑1 (MQ=255)
gAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATg < 1:4278250/93‑1 (MQ=255)
aaaCTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATgg < 2:3170933/93‑1 (MQ=255)
aaCTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATggg > 2:2263389/1‑93 (MQ=255)
tCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACg > 2:1952074/1‑93 (MQ=255)
ccTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACgg < 1:3520764/93‑1 (MQ=255)
cTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGt > 2:4401253/1‑93 (MQ=255)
ttGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTa < 1:5093581/93‑1 (MQ=255)
ttGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTa < 2:5014453/93‑1 (MQ=255)
ttGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTa < 1:1558800/93‑1 (MQ=255)
tGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTAt < 1:4479645/93‑1 (MQ=255)
gAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATg < 1:5864389/93‑1 (MQ=255)
gAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATg < 2:2188801/93‑1 (MQ=255)
gAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATg < 2:3195289/93‑1 (MQ=255)
aaGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATgg < 2:2946573/93‑1 (MQ=255)
aaGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATgg < 2:3893454/93‑1 (MQ=255)
aaGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATgg > 1:512102/1‑93 (MQ=255)
aaGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATgg < 2:620155/93‑1 (MQ=255)
aTGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTa > 2:5487197/1‑93 (MQ=255)
aTGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTa > 1:2071633/1‑93 (MQ=255)
gCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATc > 1:6416869/1‑93 (MQ=255)
gCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATc < 1:2780264/93‑1 (MQ=255)
gCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATc > 1:2025815/1‑93 (MQ=255)
gCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATc > 2:2853732/1‑93 (MQ=255)
cccGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATcc < 2:558913/93‑1 (MQ=255)
ccGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATccc < 1:6409399/93‑1 (MQ=255)
cGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCg > 2:457018/1‑93 (MQ=255)
gtgaagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGt > 2:3350125/1‑93 (MQ=255)
tgaagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTc > 1:2212913/1‑93 (MQ=255)
gaagtgaaCAACGTTCGCTGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTcc < 2:4016166/93‑1 (MQ=255)
gaagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTcc < 2:497067/93‑1 (MQ=255)
gaagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTcc > 2:3614837/1‑93 (MQ=255)
gaagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTcc < 1:1258587/93‑1 (MQ=255)
aagtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCt > 2:1341411/1‑93 (MQ=255)
agtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTg > 1:5417957/1‑93 (MQ=255)
gtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGc < 2:1031135/93‑1 (MQ=255)
gtgaaCAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGc < 2:3657504/93‑1 (MQ=255)
acaacGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCa < 1:4809560/93‑1 (MQ=255)
caacGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCAt > 2:1778759/1‑93 (MQ=255)
aacGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATc < 1:57056/93‑1 (MQ=255)
aacGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATc < 1:3347605/93‑1 (MQ=255)
acGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCt < 2:1877295/93‑1 (MQ=255)
acGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCt < 1:1678239/93‑1 (MQ=255)
gTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTac < 1:4639395/93‑1 (MQ=255)
ggTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCaaa < 2:732850/93‑1 (MQ=255)
gTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAg < 1:2673640/93‑1 (MQ=255)
tGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAAc < 1:1024585/93‑1 (MQ=255)
gCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACt < 1:2637895/93‑1 (MQ=255)
cTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTg > 2:3487332/1‑93 (MQ=255)
cTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTg < 1:382645/93‑1 (MQ=255)
cTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTg > 2:5916255/1‑93 (MQ=255)
tGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGa < 1:1952562/93‑1 (MQ=255)
gggCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGCACTGAt > 1:2564800/1‑93 (MQ=255)
gggCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGAt < 2:3074497/93‑1 (MQ=255)
gggCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGAt > 2:2562335/1‑93 (MQ=255)
gggCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGAt > 1:1236183/1‑93 (MQ=255)
ggCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATc < 2:52826/93‑1 (MQ=255)
ggCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATc > 1:3562994/1‑93 (MQ=255)
cTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCAc > 2:4864703/1‑93 (MQ=255)
cTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCAc > 1:2454002/1‑93 (MQ=255)
ttCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCAct < 2:6088704/93‑2 (MQ=255)
cACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGa < 1:2960099/93‑1 (MQ=255)
ccGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAtt < 1:3677056/93‑1 (MQ=255)
cGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAttt < 1:759854/93‑1 (MQ=255)
|
CGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTT > NC_000913/4618514‑4618693
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGGC > NC_000913/4618511‑4618697
|
AGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGC > SRR4302534.276742/1‑94 (MQ=60)
GGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCA < SRR4302534.6301107/94‑1 (MQ=60)
CGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACT > SRR4302534.2084546/1‑94 (MQ=60)
CGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACT > SRR4302534.4919333/1‑94 (MQ=60)
CGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACT < SRR4302534.4489988/94‑1 (MQ=60)
GACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTT > SRR4302534.444191/1‑94 (MQ=60)
CCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTAC < SRR4302534.4222284/94‑1 (MQ=60)
CCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACA < SRR4302534.2810530/94‑1 (MQ=60)
CGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAA > SRR4302534.5640285/1‑94 (MQ=60)
CGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAA > SRR4302534.5767175/1‑94 (MQ=60)
CGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGACCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCAGTTACAA > SRR4302534.3553221/1‑94 (MQ=60)
GCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAA > SRR4302534.30107/1‑94 (MQ=60)
GCTGCGGGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAA < SRR4302534.1869258/94‑1 (MQ=60)
CTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAG < SRR4302534.5430521/94‑1 (MQ=60)
TGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGG > SRR4302534.1672389/1‑94 (MQ=60)
TGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGG > SRR4302534.2436908/1‑94 (MQ=60)
TGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACGTACAAAGG < SRR4302534.4887821/94‑1 (MQ=60)
GCGTGCGAAGTATATTGCTGAACCTTTCCTTGAAGATGCCTGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGC < SRR4302534.5607313/94‑1 (MQ=60)
GCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGC < SRR4302534.850063/94‑1 (MQ=60)
CGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCC > SRR4302534.6111793/1‑94 (MQ=60)
CGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCC < SRR4302534.4120021/94‑1 (MQ=60)
CGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCC > SRR4302534.2637020/1‑94 (MQ=60)
GTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCG > SRR4302534.5810808/1‑94 (MQ=60)
TGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGC > SRR4302534.996900/1‑94 (MQ=60)
CGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAA > SRR4302534.4334180/1‑94 (MQ=60)
CGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAA > SRR4302534.1939483/1‑94 (MQ=60)
CGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAA < SRR4302534.4507676/94‑1 (MQ=60)
GAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAA > SRR4302534.1404950/1‑94 (MQ=60)
GAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAA < SRR4302534.1062165/94‑1 (MQ=60)
AAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAA < SRR4302534.5553163/94‑1 (MQ=60)
TATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTT < SRR4302534.5056938/94‑1 (MQ=60)
ATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTC > SRR4302534.4307475/1‑94 (MQ=60)
TATTGCTGAAACTTTCCTTGATGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCC > SRR4302534.6385702/1‑94 (MQ=60)
TATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCC < SRR4302534.6364234/94‑1 (MQ=60)
ATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCG < SRR4302534.5519991/94‑1 (MQ=60)
ATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCG < SRR4302534.3843883/94‑1 (MQ=60)
TTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGT < SRR4302534.845402/94‑1 (MQ=60)
TTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGT > SRR4302534.4486216/1‑94 (MQ=60)
GCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAGAGGCCGCAAAATTTCCGTAA < SRR4302534.6071510/94‑1 (MQ=60)
GAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGG < SRR4302534.4394014/94‑1 (MQ=60)
ACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTC < SRR4302534.1695324/94‑1 (MQ=60)
CTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCA < SRR4302534.6060074/94‑1 (MQ=60)
CCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGT < SRR4302534.668801/94‑1 (MQ=60)
CCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGT < SRR4302534.3615466/94‑1 (MQ=60)
TTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTAT < SRR4302534.1599610/94‑1 (MQ=60)
TTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTAT > SRR4302534.1618084/1‑94 (MQ=60)
TTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTAT < SRR4302534.5231072/94‑1 (MQ=60)
TGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATG > SRR4302534.3529253/1‑94 (MQ=60)
TGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATG < SRR4302534.4600838/94‑1 (MQ=60)
GAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGG > SRR4302534.524855/1‑94 (MQ=60)
GAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGG < SRR4302534.6023621/94‑1 (MQ=60)
AAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGG < SRR4302534.1498279/94‑1 (MQ=60)
GATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTA > SRR4302534.2125827/1‑94 (MQ=60)
ATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTAT < SRR4302534.191182/94‑1 (MQ=60)
ATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTAT < SRR4302534.6573396/94‑1 (MQ=60)
TGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATC > SRR4302534.2078809/1‑94 (MQ=60)
TGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATC > SRR4302534.6589977/1‑94 (MQ=60)
TGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATC > SRR4302534.6589978/1‑94 (MQ=60)
GCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCC < SRR4302534.4730059/94‑1 (MQ=60)
GCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCC < SRR4302534.5243499/94‑1 (MQ=60)
GCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCC < SRR4302534.2853382/94‑1 (MQ=60)
GCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCC < SRR4302534.2853381/94‑1 (MQ=60)
CCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCC < SRR4302534.558084/94‑1 (MQ=60)
CCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCG < SRR4302534.3886941/94‑1 (MQ=60)
CCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCG < SRR4302534.4592444/94‑1 (MQ=60)
CCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCG < SRR4302534.6582367/94‑1 (MQ=60)
GTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTC > SRR4302534.2271521/1‑94 (MQ=60)
TGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCC < SRR4302534.5424103/94‑1 (MQ=60)
GAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCT < SRR4302534.5880911/94‑1 (MQ=60)
GAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCT < SRR4302534.1291742/94‑1 (MQ=60)
AAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTG < SRR4302534.582695/94‑1 (MQ=60)
AAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTG > SRR4302534.5563722/1‑94 (MQ=60)
AACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCA < SRR4302534.2741158/94‑1 (MQ=60)
ACAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCAT < SRR4302534.4940122/94‑1 (MQ=60)
CAACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATC > SRR4302534.276598/1‑94 (MQ=60)
AACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCT < SRR4302534.58595/94‑1 (MQ=60)
AACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCT < SRR4302534.344958/94‑1 (MQ=60)
AACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCT < SRR4302534.3437236/94‑1 (MQ=60)
ACGTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTA < SRR4302534.1721905/94‑1 (MQ=60)
GTTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACA < SRR4302534.4765288/94‑1 (MQ=60)
TTCGCGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACAC < SRR4302534.1804618/94‑1 (MQ=60)
CGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAA < SRR4302534.1394491/94‑1 (MQ=60)
CGGTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAA < SRR4302534.2609081/94‑1 (MQ=60)
GTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGA < SRR4302534.5449053/94‑1 (MQ=60)
GTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGA < SRR4302534.2744305/94‑1 (MQ=60)
GTATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGGATGGGTATCTCGTCCTGCTCCATCTACACCAAAGA > SRR4302534.3592054/1‑94 (MQ=60)
TATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAA < SRR4302534.2047856/94‑1 (MQ=60)
TATGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAA < SRR4302534.4391008/94‑1 (MQ=60)
TGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACT < SRR4302534.1050967/94‑1 (MQ=60)
TGCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACT < SRR4302534.5514104/94‑1 (MQ=60)
GCTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTG < SRR4302534.2707679/94‑1 (MQ=60)
CTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGA < SRR4302534.392432/94‑1 (MQ=60)
CTGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGA > SRR4302534.2745368/1‑94 (MQ=60)
TGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGCACTGAT > SRR4302534.2632776/1‑94 (MQ=60)
TGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGAT > SRR4302534.1268764/1‑94 (MQ=60)
TGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGAT < SRR4302534.2003657/94‑1 (MQ=60)
TGGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGAT > SRR4302534.3623219/1‑94 (MQ=60)
TGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATC < SRR4302534.2251331/94‑1 (MQ=60)
GGGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATC > SRR4302534.3658846/1‑94 (MQ=60)
GGCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCA < SRR4302534.3743946/94‑1 (MQ=60)
GCTTCACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCAC > SRR4302534.2519210/1‑94 (MQ=60)
CACCGGCACTTACAAAGTCCGCAAAATCGCCGTAATGGGTCACGGTATGGCTATCCCGTCCTGCTCCATCTACACCAAAAAACTGATCACGGAT < SRR4302534.1024482/94‑1 (MQ=60)
CACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAT < SRR4302534.3037653/94‑1 (MQ=60)
CACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGAT > SRR4302534.442251/1‑94 (MQ=60)
ACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATT < SRR4302534.1544860/94‑1 (MQ=60)
ACCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATT < SRR4302534.1282675/94‑1 (MQ=60)
CCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTT < SRR4302534.2296978/94‑1 (MQ=60)
CCGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTT < SRR4302534.3775916/94‑1 (MQ=60)
CGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTC < SRR4302534.3351661/94‑1 (MQ=60)
CGGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTC < SRR4302534.778714/94‑1 (MQ=60)
GGCACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCG > SRR4302534.5440354/1‑94 (MQ=60)
CACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGGC > SRR4302534.6012372/1‑94 (MQ=60)
CACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGGC < SRR4302534.95612/94‑1 (MQ=60)
|
AGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGGC > NC_000913/4618511‑4618697
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
