Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 884 257.2 12958910 96.9% 12557183 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CG‑G‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG  >  NC_000913/4448448‑4448623
                                                                                               |                                                                                      
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CG                                                                                        >  SRR4302534.981466/1‑94 (MQ=60)
 ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CG‑C                                                                                      >  SRR4302534.5028503/1‑94 (MQ=60)
   ACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑C‑‑G‑‑C‑GC                                                                                >  SRR4302534.4435197/1‑94 (MQ=60)
     CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccg                                                                                   >  SRR4302534.470393/1‑89 (MQ=60)
     CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccg                                                                                   >  SRR4302534.1404943/1‑89 (MQ=60)
      GCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgc                                                                                  >  SRR4302534.6178774/1‑88 (MQ=60)
       CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgca                                                                                 >  SRR4302534.4352458/1‑87 (MQ=60)
       CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgca                                                                                 >  SRR4302534.2186039/1‑87 (MQ=60)
       CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgca                                                                                 >  SRR4302534.222791/1‑87 (MQ=60)
        AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcat                                                                                >  SRR4302534.1471182/1‑86 (MQ=60)
        AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcat                                                                                >  SRR4302534.3976532/1‑86 (MQ=60)
          AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcatcc                                                                              <  SRR4302534.1855198/94‑11 (MQ=60)
          AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcatcc                                                                              >  SRR4302534.1907575/1‑84 (MQ=60)
          AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CGcgccgcatcc                                                                              <  SRR4302534.3046545/94‑11 (MQ=60)
            GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGG                                                                          <  SRR4302534.2324401/94‑1 (MQ=60)
            GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGG                                                                          <  SRR4302534.3312264/94‑1 (MQ=60)
             AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGC                                                                         >  SRR4302534.3596878/1‑94 (MQ=60)
             AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGC                                                                         >  SRR4302534.5259766/1‑94 (MQ=60)
             AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGC                                                                         >  SRR4302534.3720465/1‑94 (MQ=60)
              AGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCG                                                                        >  SRR4302534.4859387/1‑94 (MQ=60)
              AGAATTAGAGAAGAAGAAAAATATGGGGAATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCG                                                                        >  SRR4302534.1444637/1‑94 (MQ=60)
                AATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCTATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGAT                                                                      >  SRR4302534.3348640/1‑94 (MQ=60)
                   TAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGT                                                                   <  SRR4302534.1903967/94‑1 (MQ=60)
                   TAGAGAAAAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGT                                                                   >  SRR4302534.5505798/1‑94 (MQ=60)
                    AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTG                                                                  <  SRR4302534.466982/94‑1 (MQ=60)
                    AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTG                                                                  >  SRR4302534.5610520/1‑94 (MQ=60)
                    AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTG                                                                  <  SRR4302534.3091643/94‑1 (MQ=60)
                    AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTG                                                                  >  SRR4302534.812219/1‑94 (MQ=60)
                     GAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGC                                                                 >  SRR4302534.5988189/1‑94 (MQ=60)
                     GAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGC                                                                 >  SRR4302534.3434577/1‑94 (MQ=60)
                      AGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCA                                                                <  SRR4302534.1717871/94‑1 (MQ=60)
                      AGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCA                                                                >  SRR4302534.6281855/1‑94 (MQ=60)
                       GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCAC                                                               >  SRR4302534.3967741/1‑94 (MQ=60)
                       GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCAC                                                               >  SRR4302534.606812/1‑94 (MQ=60)
                       GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCAC                                                               >  SRR4302534.2822926/1‑94 (MQ=60)
                       GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCAC                                                               >  SRR4302534.2101904/1‑94 (MQ=60)
                        AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACT                                                              >  SRR4302534.3246567/1‑94 (MQ=60)
                         AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTG                                                             >  SRR4302534.353882/1‑94 (MQ=60)
                         AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTG                                                             >  SRR4302534.4387516/1‑94 (MQ=60)
                            AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAG                                                          >  SRR4302534.6236910/1‑94 (MQ=60)
                            AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAG                                                          >  SRR4302534.379926/1‑94 (MQ=60)
                            AGAAAAATATGGGGTATAGAGGGTTGTTATGCTTGATCCGGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAG                                                          <  SRR4302534.2714593/94‑1 (MQ=33)
                              AAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCC                                                        >  SRR4302534.1321760/1‑94 (MQ=60)
                              AAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCC                                                        >  SRR4302534.1273631/1‑94 (MQ=60)
                              AAAAATATGGGGTATTGAGGGTTCCTATCCCTGATGCCGATTCGTAGGCCGAATAGGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCC                                                        <  SRR4302534.3600537/94‑1 (MQ=60)
                               AAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCT                                                       <  SRR4302534.5257541/94‑1 (MQ=60)
                               AAAATAGGGGTTATGGAGGGTCGCTATGCCTGATGCCGATTCGTAGTCCGGATAGGGCGCTCGCG‑C‑‑C‑GCACCCGCCGATGGTGCACTGAAGCCT                                                       <  SRR4302534.5738322/94‑1 (MQ=30)
                                AAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTG                                                      >  SRR4302534.3595080/1‑94 (MQ=60)
                                  ATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGAT                                                    >  SRR4302534.4724424/1‑94 (MQ=60)
                                  ATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGAT                                                    >  SRR4302534.312827/1‑94 (MQ=60)
                                  ATATGGGGTATGGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAGGGCGCTCGCG‑C‑‑C‑GCATCAGGCGATGGTGCACTGAAGCCTGAT                                                    <  SRR4302534.5150944/94‑1 (MQ=60)
                                   TATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATG                                                   >  SRR4302534.4798409/1‑94 (MQ=60)
                                    ATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGC                                                  <  SRR4302534.210721/94‑1 (MQ=60)
                                    ATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGC                                                  >  SRR4302534.5201782/1‑94 (MQ=60)
                                     TGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCG                                                 <  SRR4302534.6072659/94‑1 (MQ=60)
                                     TGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCG                                                 >  SRR4302534.3795847/1‑94 (MQ=60)
                                       GGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGAC                                               <  SRR4302534.1929746/94‑1 (MQ=60)
                                        GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACG                                              <  SRR4302534.6189313/94‑1 (MQ=60)
                                        GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACG                                              >  SRR4302534.3105847/1‑94 (MQ=60)
                                         GTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGC                                             >  SRR4302534.6298508/1‑94 (MQ=60)
                                          TATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCT                                            >  SRR4302534.177274/1‑94 (MQ=60)
                                           ttgggggttgttTATGCCTGATGCCGATCCCGAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT                                           <  SRR4302534.4597428/82‑1 (MQ=39)
                                           ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT                                           >  SRR4302534.597165/1‑94 (MQ=60)
                                           ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT                                           <  SRR4302534.3662954/94‑1 (MQ=60)
                                            TTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTA                                          <  SRR4302534.5794790/94‑1 (MQ=60)
                                            TCGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCCCTGAAGCCTGATGCGACGCTTA                                          <  SRR4302534.3344404/94‑1 (MQ=60)
                                             TGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAC                                         <  SRR4302534.4287415/94‑1 (MQ=60)
                                              GAGGTTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC                                        <  SRR4302534.1435682/94‑1 (MQ=60)
                                              GAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGGGACGCgtagc                                        >  SRR4302534.5237428/1‑89 (MQ=60)
                                              GAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC                                        >  SRR4302534.4534177/1‑94 (MQ=60)
                                              GAGGGTTGCTATGCCTGATGCCGATCCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC                                        >  SRR4302534.5266993/1‑94 (MQ=60)
                                               AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG                                       <  SRR4302534.4770075/94‑1 (MQ=60)
                                               AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG                                       >  SRR4302534.2772537/1‑94 (MQ=60)
                                                GGTTTGCTATGCCTGATGCCGATTGGTAGGCGGAAGAAGGCGCTCGCG‑C‑‑C‑GCACCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGC                                      <  SRR4302534.5654100/94‑1 (MQ=54)
                                                GGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGC                                      >  SRR4302534.2632764/1‑94 (MQ=60)
                                                 GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG                                     >  SRR4302534.2580228/1‑94 (MQ=60)
                                                 GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG                                     <  SRR4302534.912091/94‑1 (MQ=60)
                                                  GTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGT                                    >  SRR4302534.2357129/1‑94 (MQ=60)
                                                    TGATATGCCTGTTGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCT                                  <  SRR4302534.712143/94‑1 (MQ=60)
                                                     GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                 >  SRR4302534.6083296/1‑94 (MQ=60)
                                                     GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                 >  SRR4302534.5078855/1‑94 (MQ=60)
                                                       TATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAT                               <  SRR4302534.404559/94‑1 (MQ=60)
                                                        ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC                              >  SRR4302534.228621/1‑94 (MQ=60)
                                                         TGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA                             >  SRR4302534.4442703/1‑94 (MQ=60)
                                                         TGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA                             >  SRR4302534.4240122/1‑94 (MQ=60)
                                                          gcttgtcgcgGATTCGTAGGCCGTATAAGGCGCT‑‑CG‑GGCC‑GCTTCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT                            <  SRR4302534.1446852/84‑1 (MQ=60)
                                                          GCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT                            <  SRR4302534.2822973/94‑1 (MQ=60)
                                                           CCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                           >  SRR4302534.1353633/1‑94 (MQ=60)
                                                           CCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                           >  SRR4302534.5622520/1‑94 (MQ=60)
                                                           CCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                           >  SRR4302534.6258129/1‑94 (MQ=60)
                                                           CCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                           <  SRR4302534.1844217/94‑1 (MQ=60)
                                                            CTTATCCCGATTCGTAGGCCGGATAAGCCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC                          <  SRR4302534.3877323/94‑1 (MQ=60)
                                                            CTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC                          >  SRR4302534.52099/1‑94 (MQ=60)
                                                            ATGATGCCGATTCGTAGGCGGGATAGGGCGCT‑‑CGCG‑‑CGGCATCGGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC                          <  SRR4302534.2549783/94‑1 (MQ=60)
                                                             TGATGCCGATTCGTAGGCGGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC                         <  SRR4302534.86198/94‑1 (MQ=60)
                                                              GATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT                        <  SRR4302534.6174060/94‑1 (MQ=60)
                                                              GATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT                        <  SRR4302534.4474756/94‑1 (MQ=60)
                                                              GATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT                        >  SRR4302534.6371196/1‑94 (MQ=60)
                                                              GATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT                        <  SRR4302534.1048318/94‑1 (MQ=60)
                                                               ATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA                       >  SRR4302534.5820187/1‑94 (MQ=60)
                                                               ATGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA                       >  SRR4302534.5778636/1‑94 (MQ=60)
                                                                TGCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAC                      <  SRR4302534.3750814/94‑1 (MQ=60)
                                                                 GCCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT                     <  SRR4302534.932595/94‑1 (MQ=60)
                                                                  CCGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG                    <  SRR4302534.3364318/94‑1 (MQ=60)
                                                                   CGATTCGTAGGCCGGATAGGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG                   <  SRR4302534.3563673/94‑1 (MQ=60)
                                                                   CGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG                   >  SRR4302534.4670798/1‑94 (MQ=60)
                                                                   CGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG                   >  SRR4302534.1361711/1‑94 (MQ=60)
                                                                   CGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG                   <  SRR4302534.6382548/94‑1 (MQ=60)
                                                                   CGATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG                   >  SRR4302534.5021492/1‑94 (MQ=60)
                                                                    GATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG                  <  SRR4302534.2803781/94‑1 (MQ=60)
                                                                    GATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG                  >  SRR4302534.4258931/1‑94 (MQ=60)
                                                                    GATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG                  >  SRR4302534.3336976/1‑94 (MQ=60)
                                                                     ATTCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGA                 >  SRR4302534.525861/1‑94 (MQ=60)
                                                                      TTCGTAGGCGGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG                <  SRR4302534.5723880/94‑1 (MQ=60)
                                                                       TCGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGC               <  SRR4302534.6219132/94‑1 (MQ=60)
                                                                        CGTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCA              >  SRR4302534.2967034/1‑94 (MQ=60)
                                                                         GTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC             >  SRR4302534.4262910/1‑94 (MQ=60)
                                                                         GTAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC             >  SRR4302534.1269172/1‑94 (MQ=60)
                                                                          TAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACG            >  SRR4302534.19845/1‑94 (MQ=60)
                                                                          TAGGCCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACG            >  SRR4302534.3270584/1‑94 (MQ=60)
                                                                              CCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTT        >  SRR4302534.1944151/1‑94 (MQ=60)
                                                                              CCGGATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTT        <  SRR4302534.2469762/94‑1 (MQ=60)
                                                                                 GATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACA     >  SRR4302534.962075/1‑94 (MQ=60)
                                                                                 GATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACA     >  SRR4302534.6275090/1‑94 (MQ=60)
                                                                                 GATAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACA     >  SRR4302534.3049971/1‑94 (MQ=60)
                                                                                   TAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC   >  SRR4302534.1083567/1‑94 (MQ=60)
                                                                                   TAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC   >  SRR4302534.3767366/1‑94 (MQ=60)
                                                                                   TAAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC   <  SRR4302534.1300088/94‑1 (MQ=60)
                                                                                    AAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG  >  SRR4302534.2157054/1‑94 (MQ=60)
                                                                                    AAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG  >  SRR4302534.412545/1‑94 (MQ=60)
                                                                                    AAGGCGCTCGCG‑C‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG  <  SRR4302534.4461810/94‑1 (MQ=60)
                                                                                               |                                                                                      
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCT‑‑CG‑G‑‑C‑GCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG  >  NC_000913/4448448‑4448623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑