Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F224 I0 R1
|
1457 |
284.0 |
9290224 |
95.7% |
8890744 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
3,494,830 |
C→T |
34.1% |
R68R (CGC→CGT) |
frlB → |
fructoselysine‑6‑P‑deglycase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 3,494,830 | 0 | C | T | 34.1%
| 403.8
/ 296.0
| 293 | R68R (CGC→CGT) | frlB | fructoselysine‑6‑P‑deglycase |
| Reads supporting (aligned to +/- strand): ref base C (88/105); new base T (38/62); total (126/167) |
| Fisher's exact test for biased strand distribution p-value = 2.63e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 299 total aligned reads displayed.
CAGGAAGTGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTG > CP009273/3494681‑3494979
|
ggAAGTGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCtt < 2:297717/150‑1 (MQ=255)
aaGTGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCtttt < 1:3896113/150‑1 (MQ=255)
aGTGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTc < 1:217311/150‑1 (MQ=255)
gTGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTcc > 1:1541496/1‑150 (MQ=255)
tGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCg > 2:3050678/1‑150 (MQ=255)
gAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGAt < 1:425737/150‑1 (MQ=255)
gAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGAt < 2:2858370/150‑1 (MQ=255)
aaaaGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCt < 2:2730296/150‑1 (MQ=255)
aaaGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCtt < 1:1033719/150‑1 (MQ=255)
aaaGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCtt > 1:2071408/1‑150 (MQ=255)
aGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCa > 2:334563/1‑150 (MQ=255)
aGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCa < 2:2792893/150‑1 (MQ=255)
gTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAg < 1:1360217/150‑1 (MQ=255)
gTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAg < 1:2457668/150‑1 (MQ=255)
tctcAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGt > 2:1141443/1‑150 (MQ=255)
ctcAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTc > 1:4328311/1‑150 (MQ=255)
ctcAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTc > 1:3385289/1‑150 (MQ=255)
tcAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCt < 1:282820/150‑1 (MQ=255)
cAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAATGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTa < 2:1750491/150‑1 (MQ=255)
cAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTa > 1:2220397/1‑150 (MQ=255)
aGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTAc > 1:3016388/1‑150 (MQ=255)
cATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGcc < 1:967135/150‑1 (MQ=255)
cATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGcc < 1:554521/150‑1 (MQ=255)
aCGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCAttt < 2:1041284/150‑1 (MQ=255)
cGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTc < 1:4430020/150‑1 (MQ=255)
tCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCgg > 2:1430114/1‑150 (MQ=255)
tCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCgg < 1:3476896/150‑1 (MQ=255)
ccGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGc < 2:2115569/150‑1 (MQ=255)
gCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTg > 2:2249994/1‑150 (MQ=255)
cTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTgg < 1:520321/150‑1 (MQ=255)
ggTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGa > 1:903529/1‑150 (MQ=255)
gTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAg < 1:665236/150‑1 (MQ=255)
aCGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCt > 2:3624095/1‑150 (MQ=255)
gCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGc < 1:3360123/150‑1 (MQ=255)
gCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGc > 2:3956341/1‑150 (MQ=255)
ccATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCg > 2:1504049/1‑150 (MQ=255)
aTCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGAt > 2:3164100/1‑150 (MQ=255)
ggAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAacac > 2:323115/1‑150 (MQ=255)
ggAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAacac > 2:1337089/1‑150 (MQ=255)
gAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACAcc > 2:2194744/1‑150 (MQ=255)
gAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTACCCATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACAcc > 2:4528657/1‑150 (MQ=255)
agagATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACAcccc > 2:2777249/1‑150 (MQ=255)
gagaTGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCg < 1:1530554/150‑1 (MQ=255)
agaTGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGt > 1:60206/1‑150 (MQ=255)
tGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGTCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATc > 2:90415/1‑150 (MQ=255)
tGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATc < 2:958613/150‑1 (MQ=255)
tGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATc < 1:4224336/150‑1 (MQ=255)
tGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATc < 1:1200462/150‑1 (MQ=255)
aaGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTc < 1:1777977/150‑1 (MQ=255)
aGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTcg > 2:2899493/1‑150 (MQ=255)
cgcgACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTcgac < 2:797459/150‑1 (MQ=255)
cgcgACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTcgac < 1:2331602/150‑1 (MQ=255)
cgcgACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTcgac > 2:1378401/1‑150 (MQ=255)
cgcgACATTGATCGTATTTATTTCGTAGCATGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTcgac > 1:3299963/1‑150 (MQ=255)
aCATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGATGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATc < 1:3072491/150‑1 (MQ=255)
aCATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATc < 1:4613995/150‑1 (MQ=255)
ttGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGtt < 1:3979349/150‑1 (MQ=255)
aTCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTgcg < 1:2633030/150‑1 (MQ=255)
cGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCa > 2:2640739/1‑150 (MQ=255)
tatttattTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGt < 2:1912710/150‑1 (MQ=255)
tatttattTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGt < 1:4299346/150‑1 (MQ=255)
atttatttCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTa > 2:1867390/1‑150 (MQ=255)
tatttCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAAtt < 1:1660419/150‑1 (MQ=255)
tatttCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAAtt > 2:3862761/1‑150 (MQ=255)
tttCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTgg < 1:2149733/150‑1 (MQ=255)
tttCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTgg < 1:839313/150‑1 (MQ=255)
ttCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAAAATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGc < 2:2408479/150‑1 (MQ=255)
ttCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAAAATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGc < 2:566228/150‑1 (MQ=255)
cGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGt > 1:2929039/1‑150 (MQ=255)
gTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGtt > 1:3331935/1‑150 (MQ=255)
gTTGCCTGCGGATCGCCACTCAACGCGGCGCAAAAGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGtt > 2:3196176/1‑150 (MQ=255)
ttGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGttt > 1:3809136/1‑150 (MQ=255)
gCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCt < 2:576551/150‑1 (MQ=255)
ccTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTg < 2:2890531/150‑1 (MQ=255)
tGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGAc < 1:3601697/150‑1 (MQ=255)
cGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTa > 1:1002072/1‑150 (MQ=255)
ggATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTTGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTAc < 2:732167/150‑1 (MQ=255)
aCTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAAc > 1:4519874/1‑150 (MQ=255)
cTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAAcc < 1:487254/150‑1 (MQ=255)
cTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAAcc < 1:16200/150‑1 (MQ=255)
cAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGa < 1:253612/150‑1 (MQ=255)
aaCGCGGCGCAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGaa > 1:2266983/1‑150 (MQ=255)
gcgcAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTa < 2:3560685/150‑1 (MQ=255)
cgcAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTaa < 2:3559292/150‑1 (MQ=255)
gcAAACGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAAt > 2:3013456/1‑150 (MQ=255)
aaaCGGCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCa > 2:2670545/1‑150 (MQ=255)
cGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAg < 2:1673750/150‑1 (MQ=255)
ggCGAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAgc < 2:3430553/150‑1 (MQ=255)
gAAACATCTGGCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCt > 1:3843627/1‑150 (MQ=255)
gAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCt > 2:1538372/1‑150 (MQ=255)
aCATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGa > 2:3953867/1‑150 (MQ=255)
aCATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGa > 2:124074/1‑150 (MQ=255)
tCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCt < 1:4098762/150‑1 (MQ=255)
tGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTgg < 1:2777249/150‑1 (MQ=255)
ggCGGATCGTTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTggg < 2:3879001/150‑1 (MQ=255)
ggCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTggg < 2:1046809/150‑1 (MQ=255)
ggCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTggg < 1:3135630/150‑1 (MQ=255)
aTCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTgggccggg < 2:4328311/150‑1 (MQ=255)
cTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTg > 2:1980984/1‑150 (MQ=255)
cTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTg < 1:3164123/150‑1 (MQ=255)
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CAGGAAGTGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTG > CP009273/3494681‑3494979
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
