Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F434 I0 R1 1130 215.9 7031662 97.1% 6827743 147.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,182,732 T→A 67.8% pseudogene (1953/2445 nt) yqiG → pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,182,7320TA67.8% 256.4 / 183.1 189pseudogene (1953/2445 nt)yqiGpseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein
Reads supporting (aligned to +/- strand):  ref base T (24/37);  new base A (45/83);  total (69/120)
Fisher's exact test for biased strand distribution p-value = 6.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

Only 100 of 189 total aligned reads displayed.

GCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATACC  >  CP009273/3182589‑3182876
                                                                                                                                               |                                                                                                                                                
gcCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACTTTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTg                                                                                                                                              <  2:607105/148‑1 (MQ=255)
gcCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTg                                                                                                                                              <  1:3114240/148‑1 (MQ=255)
   aGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTg                                                                                                                                           <  1:1345265/148‑1 (MQ=255)
    gTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGa                                                                                                                                          <  2:674776/148‑1 (MQ=255)
         cAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTcgc                                                                                                                                     >  2:1923287/1‑148 (MQ=255)
            cATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGtt                                                                                                                                  <  2:1059059/148‑1 (MQ=255)
                ataCCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTAt                                                                                                                              <  2:2776497/148‑1 (MQ=255)
                 taCCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATg                                                                                                                             >  1:3196209/1‑148 (MQ=255)
                 taCCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATg                                                                                                                             >  1:3196224/1‑148 (MQ=255)
                   ccGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGAt                                                                                                                           <  1:1944026/148‑1 (MQ=255)
                     gagaACGGTCGACTCTACCTCTCCGGTACATCACCGCTAGACTGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCg                                                                                                                         <  2:1830131/148‑1 (MQ=255)
                      agaACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGa                                                                                                                        >  2:2327284/1‑148 (MQ=255)
                       gaACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGAc                                                                                                                       >  2:792410/1‑148 (MQ=255)
                        aaCGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACg                                                                                                                      <  1:2003217/148‑1 (MQ=255)
                         aCGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGc                                                                                                                     <  1:431399/148‑1 (MQ=255)
                            gTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGa                                                                                                                  <  2:3263434/148‑1 (MQ=255)
                             tCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGAc                                                                                                                 >  2:355668/1‑148 (MQ=255)
                             tCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGAc                                                                                                                 >  2:1771064/1‑148 (MQ=255)
                               gACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACgg                                                                                                               <  2:1123855/148‑1 (MQ=255)
                                 ctctACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCa                                                                                                             >  2:420990/1‑148 (MQ=255)
                                 ctctACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCa                                                                                                             <  2:2490524/148‑1 (MQ=255)
                                 ctctACCTCTCCGGTACATCACAGCCAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCa                                                                                                             >  2:1425375/1‑148 (MQ=255)
                                    tACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTg                                                                                                          <  1:2477413/148‑1 (MQ=255)
                                      ccTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGaa                                                                                                        >  2:494434/1‑148 (MQ=255)
                                       ctctCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAg                                                                                                       <  2:1143850/148‑1 (MQ=255)
                                        tctcCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGa                                                                                                      <  2:3304101/148‑1 (MQ=255)
                                        tctcCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGa                                                                                                      <  2:1352531/148‑1 (MQ=255)
                                          tcCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGata                                                                                                    >  2:3022080/1‑148 (MQ=255)
                                           ccGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGatat                                                                                                   <  1:2664645/148‑1 (MQ=255)
                                           ccGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGatat                                                                                                   <  2:530492/148‑1 (MQ=255)
                                                 cctCACAGCTAGACAGGTAGTAGTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGtt                                                                                             <  2:3229097/146‑1 (MQ=255)
                                                    cacaGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGaa                                                                                          <  2:1147965/148‑1 (MQ=255)
                                                    cacaGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGaa                                                                                          <  1:1553724/148‑1 (MQ=255)
                                                    cacaGCTAGACAGTTATCATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGaa                                                                                          >  2:807604/1‑148 (MQ=255)
                                                    cacaGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGaa                                                                                          <  2:1960469/148‑1 (MQ=255)
                                                       aGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACaa                                                                                       <  2:3340391/148‑1 (MQ=255)
                                                         ctagaCAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATa                                                                                     <  1:2024231/146‑1 (MQ=255)
                                                         ctagaCAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATa                                                                                     >  2:2271851/3‑148 (MQ=255)
                                                         ctagaCAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATa                                                                                     <  2:217691/146‑1 (MQ=255)
                                                          tagaCAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATaa                                                                                    <  1:1888363/147‑1 (MQ=255)
                                                          tagaCAGTTATTATTCTCTGAAGGACAGTTGGATTGGTTCATTCACTGCGACTCGCCCCGGTGCCTATTTACACGTATATAGCGGAAGGGCTGACTCGCGTTTTATGATCTACGCAGTGGGCTCTTTCGATATTCCGTTGATCAATaa                                                                                    <  2:2007671/147‑1 (MQ=255)
                                                             aCAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAAcg                                                                                 <  2:207384/148‑1 (MQ=255)
                                                             aCAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAAcg                                                                                 <  2:2372901/148‑1 (MQ=255)
                                                              cAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAAcgc                                                                                >  2:977892/1‑148 (MQ=255)
                                                               aGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAAcgcg                                                                               <  1:1109977/148‑1 (MQ=255)
                                                                gTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAAcgcgc                                                                              >  1:1240140/1‑148 (MQ=255)
                                                                 ttattaTTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAAcgcgcg                                                                             >  2:1217596/1‑148 (MQ=255)
                                                                  tattatTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATAGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCgg                                                                            >  1:941544/1‑148 (MQ=255)
                                                                   attattCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGt                                                                           >  2:3305318/1‑148 (MQ=255)
                                                                   attattCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGt                                                                           >  2:983622/1‑148 (MQ=255)
                                                                     tattCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTaa                                                                         >  1:604921/1‑148 (MQ=255)
                                                                       ttCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACt                                                                       >  1:1460278/1‑148 (MQ=255)
                                                                        tctcTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACtt                                                                      <  1:1923287/148‑2 (MQ=255)
                                                                        tctcTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTa                                                                      <  2:18634/148‑1 (MQ=255)
                                                                           ctGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATc                                                                   >  1:892967/1‑148 (MQ=255)
                                                                              aaTGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGt                                                                >  2:2073957/1‑148 (MQ=255)
                                                                               aTGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTa                                                               <  1:1143969/148‑1 (MQ=255)
                                                                                  ccAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATgg                                                            <  2:1287160/148‑1 (MQ=255)
                                                                                  actgTTGGATTGGTTAATTCACTGCGACTCGCCACGGTGCCTCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATAGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATgg                                                            <  2:1376765/145‑1 (MQ=255)
                                                                                     gTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCAt                                                         >  1:3183402/1‑148 (MQ=255)
                                                                                      ttGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAACCGCGCGGTAACTAATCGGTCTGGCCTc                                                        >  1:3246917/1‑148 (MQ=255)
                                                                                       tGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCg                                                       >  2:3416110/1‑148 (MQ=255)
                                                                                          aaTGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAg                                                    <  1:1771064/148‑1 (MQ=255)
                                                                                          aaTGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAg                                                    <  2:2582399/148‑1 (MQ=255)
                                                                                            tgtttaattcaCTGCGACTCGCCACGTTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGtt                                                  <  1:3238785/142‑1 (MQ=255)
                                                                                              gTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTAt                                                >  2:3372420/1‑148 (MQ=255)
                                                                                                  attcaCTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGGAACTAATCGGTATGGCATCGGAGTTATTCCa                                            <  1:3019873/148‑1 (MQ=255)
                                                                                                   ttcaCTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCAt                                           >  2:1111132/1‑148 (MQ=255)
                                                                                                   ttcaCTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCAt                                           <  2:645021/148‑1 (MQ=255)
                                                                                                   ttcaCTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCAt                                           >  2:3000375/1‑148 (MQ=255)
                                                                                                     caCTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCAtca                                         <  1:3458896/148‑1 (MQ=255)
                                                                                                     caCTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCAtca                                         >  1:2394602/1‑148 (MQ=255)
                                                                                                         gCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCAtcagtca                                     >  2:285420/1‑148 (MQ=255)
                                                                                                         gCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAGGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCAtcagtca                                     >  2:1086779/1‑148 (MQ=255)
                                                                                                           gACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATAAGTcagc                                   <  1:1217596/148‑1 (MQ=255)
                                                                                                             cTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTcagcag                                 >  2:1639967/1‑148 (MQ=255)
                                                                                                             cTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTcagcag                                 >  2:1639996/1‑148 (MQ=255)
                                                                                                              tCGCCACGGGGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGt                                <  1:350077/148‑1 (MQ=255)
                                                                                                                gCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTa                              <  1:1111132/148‑1 (MQ=255)
                                                                                                                 ccACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTCTGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTAc                             <  1:2815121/148‑1 (MQ=255)
                                                                                                                    cGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATa                          <  2:2632529/148‑1 (MQ=255)
                                                                                                                         ccGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATaacaac                     >  2:3119419/1‑148 (MQ=255)
                                                                                                                          cGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACTCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAacaaca                    <  2:1583896/148‑1 (MQ=255)
                                                                                                                            cTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAAcatc                  >  2:2558938/1‑148 (MQ=255)
                                                                                                                             tttCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAAcatca                 <  1:1670122/148‑1 (MQ=255)
                                                                                                                             tttCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAAcatca                 <  1:1670672/148‑1 (MQ=255)
                                                                                                                              ttCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAAcatcat                >  2:2129316/1‑148 (MQ=255)
                                                                                                                              ttCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAAcatcat                <  2:1520650/148‑1 (MQ=255)
                                                                                                                               tCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCAtt               <  2:893610/148‑1 (MQ=255)
                                                                                                                                ccACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGATCAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTa              <  1:792410/148‑1 (MQ=255)
                                                                                                                                ccACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTa              <  1:792422/148‑1 (MQ=255)
                                                                                                                                    gACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAgtg          <  2:3389389/148‑1 (MQ=255)
                                                                                                                                    gACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAgtg          <  1:59020/148‑1 (MQ=255)
                                                                                                                                     aCTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAgtgt         <  1:2073957/148‑1 (MQ=255)
                                                                                                                                     aCTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAgtgt         <  1:2329330/148‑1 (MQ=255)
                                                                                                                                     aCTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAgtgt         <  2:1682963/148‑1 (MQ=255)
                                                                                                                                     aCTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAgtgt         >  1:11466/1‑148 (MQ=255)
                                                                                                                                     aCTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAgtgt         >  1:2733342/1‑148 (MQ=255)
                                                                                                                                     aCTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTAACATAACAACATCATTAAgtgt         <  2:2153959/148‑1 (MQ=255)
                                                                                                                                            cGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATAcc  <  2:1460278/148‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                
GCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATACC  >  CP009273/3182589‑3182876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATACCCGAAA  >  CP009273/3182585‑3182881
                                                                                                                                                   |                                                                                                                                                     
ACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAG                                                                                                                                                     <  SRR19973065.1427856/150‑1 (MQ=60)
 CGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCTTTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGT                                                                                                                                                    <  SRR19973065.2975142/150‑1 (MQ=60)
 CGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGT                                                                                                                                                    <  SRR19973065.3129970/150‑1 (MQ=60)
    GCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCT                                                                                                                                                 <  SRR19973065.3133220/150‑1 (MQ=60)
     CCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTG                                                                                                                                                <  SRR19973065.2019672/150‑1 (MQ=60)
       AGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGAC                                                                                                                                              <  SRR19973065.1354161/150‑1 (MQ=60)
               GCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTT                                                                                                                                      <  SRR19973065.1955879/150‑1 (MQ=60)
                CATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTT                                                                                                                                     <  SRR19973065.3260066/150‑1 (MQ=60)
                 ATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTA                                                                                                                                    <  SRR19973065.3217225/150‑1 (MQ=60)
                   AATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATG                                                                                                                                  >  SRR19973065.3215484/1‑150 (MQ=60)
                   AATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATG                                                                                                                                  >  SRR19973065.3215469/1‑150 (MQ=60)
                   AATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATG                                                                                                                                  >  SRR19973065.3214725/1‑150 (MQ=60)
                    ATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGA                                                                                                                                 <  SRR19973065.26190/150‑1 (MQ=60)
                    ATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGA                                                                                                                                 <  SRR19973065.992580/150‑1 (MQ=60)
                    ATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGA                                                                                                                                 <  SRR19973065.1816172/150‑1 (MQ=60)
                     TACCGAGACCGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGAT                                                                                                                                <  SRR19973065.305176/150‑1 (MQ=60)
                      ACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATC                                                                                                                               <  SRR19973065.1576646/150‑1 (MQ=60)
                       CCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCG                                                                                                                              <  SRR19973065.1956733/150‑1 (MQ=60)
                          AGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACG                                                                                                                           <  SRR19973065.2921593/150‑1 (MQ=60)
                            AACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCA                                                                                                                         <  SRR19973065.2016171/150‑1 (MQ=60)
                             ACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAG                                                                                                                        <  SRR19973065.434396/150‑1 (MQ=60)
                               GGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGAC                                                                                                                      <  SRR19973065.2448799/150‑1 (MQ=60)
                                   GACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCA                                                                                                                  <  SRR19973065.3163369/150‑1 (MQ=60)
                                        TACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAA                                                                                                             <  SRR19973065.2493011/150‑1 (MQ=60)
                                        TACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAA                                                                                                             >  SRR19973065.2783587/1‑150 (MQ=60)
                                              TCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATT                                                                                                       >  SRR19973065.1424930/1‑150 (MQ=60)
                                               CCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTC                                                                                                      <  SRR19973065.2681133/150‑1 (MQ=60)
                                                    ACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTG                                                                                                 <  SRR19973065.1985064/150‑1 (MQ=60)
                                                      ATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAA                                                                                               >  SRR19973065.2742437/1‑150 (MQ=60)
                                                        CACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACA                                                                                             <  SRR19973065.1564025/150‑1 (MQ=60)
                                                             CTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAA                                                                                        <  SRR19973065.2037246/150‑1 (MQ=60)
                                                              TAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAAC                                                                                       <  SRR19973065.1900783/150‑1 (MQ=60)
                                                               AGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATCTTCCGTTGAACAATAAACG                                                                                      >  SRR19973065.112396/1‑150 (MQ=60)
                                                               AGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACG                                                                                      >  SRR19973065.1212160/1‑150 (MQ=60)
                                                                GACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGC                                                                                     >  SRR19973065.1739352/1‑150 (MQ=60)
                                                                  CAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGC                                                                                   >  SRR19973065.1248288/1‑150 (MQ=60)
                                                                   AGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCG                                                                                  <  SRR19973065.1117238/150‑1 (MQ=60)
                                                                    GTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGG                                                                                 >  SRR19973065.1241387/1‑150 (MQ=60)
                                                                    GTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATAGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGG                                                                                 >  SRR19973065.947766/1‑150 (MQ=60)
                                                                       ATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAA                                                                              >  SRR19973065.608742/1‑150 (MQ=60)
                                                                         TATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACT                                                                            >  SRR19973065.1469666/1‑150 (MQ=60)
                                                                          ATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTA                                                                           <  SRR19973065.2229556/150‑1 (MQ=60)
                                                                            TCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTTAT                                                                         <  SRR19973065.1935895/150‑1 (MQ=60)
                                                                             CTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATC                                                                        >  SRR19973065.898641/1‑150 (MQ=60)
                                                                                   ATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATG                                                                  <  SRR19973065.1151430/150‑1 (MQ=60)
                                                                                   ATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATG                                                                  <  SRR19973065.1151356/150‑1 (MQ=60)
                                                                                    TGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGG                                                                 <  SRR19973065.648560/150‑1 (MQ=60)
                                                                                     GCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGC                                                                <  SRR19973065.2058875/150‑1 (MQ=60)
                                                                                      cctgttgttATGGTTCATTCACTGCGACTCGCCACGGTGCCGATTTCCACGACTATCGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCA                                                               <  SRR19973065.429079/141‑1 (MQ=60)
                                                                                       CAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCAT                                                              >  SRR19973065.3202628/1‑150 (MQ=60)
                                                                                        AGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATC                                                             >  SRR19973065.829489/1‑150 (MQ=60)
                                                                                        AGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAACCGCGCGGTAACTAATCGGTCTGGCCTC                                                             >  SRR19973065.3266521/1‑150 (MQ=60)
                                                                                              AATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTT                                                       <  SRR19973065.1782661/150‑1 (MQ=60)
                                                                                                TGTTTAATTCACTGCGACTCGCCACGTTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTAT                                                     <  SRR19973065.3258289/150‑1 (MQ=60)
                                                                                                      ATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGGAACTAATCGGTATGGCATCGGAGTTATTCCATC                                               <  SRR19973065.3038374/150‑1 (MQ=60)
                                                                                                       TTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCA                                              >  SRR19973065.2409662/1‑150 (MQ=60)
                                                                                                         CACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGT                                            <  SRR19973065.3479969/150‑1 (MQ=60)
                                                                                                            TGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAG                                         >  SRR19973065.1920202/1‑150 (MQ=60)
                                                                                                               GACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAG                                      >  SRR19973065.923312/1‑150 (MQ=60)
                                                                                                               GACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATAAGTCAGCAG                                      <  SRR19973065.1225501/150‑1 (MQ=60)
                                                                                                                  TCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTA                                   <  SRR19973065.352494/150‑1 (MQ=60)
                                                                                                                  TCGCCACGGGGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTA                                   <  SRR19973065.352527/150‑1 (MQ=60)
                                                                                                                    GCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACA                                 <  SRR19973065.1118397/150‑1 (MQ=60)
                                                                                                                     CCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTCTGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACAT                                <  SRR19973065.2832520/150‑1 (MQ=60)
                                                                                                                                 TTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATT                    <  SRR19973065.1681293/150‑1 (MQ=60)
                                                                                                                                 TTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATT                    <  SRR19973065.1681847/150‑1 (MQ=60)
                                                                                                                                  TTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTA                   <  SRR19973065.3410980/150‑1 (MQ=60)
                                                                                                                                    CCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGATCAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAG                 <  SRR19973065.797656/150‑1 (MQ=60)
                                                                                                                                    CCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAG                 <  SRR19973065.797668/150‑1 (MQ=60)
                                                                                                                                       CGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGT              <  SRR19973065.1536383/150‑1 (MQ=60)
                                                                                                                                       CGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGT              <  SRR19973065.423928/150‑1 (MQ=60)
                                                                                                                                       CGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGT              >  SRR19973065.11638/1‑150 (MQ=60)
                                                                                                                                       CGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGT              >  SRR19973065.2750345/1‑150 (MQ=60)
                                                                                                                                        GACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTT             <  SRR19973065.59676/150‑1 (MQ=60)
                                                                                                                                        GACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTT             <  SRR19973065.59651/150‑1 (MQ=60)
                                                                                                                                         ACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTG            <  SRR19973065.2343900/150‑1 (MQ=60)
                                                                                                                                         ACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTG            <  SRR19973065.2087204/150‑1 (MQ=60)
                                                                                                                                         ACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTG            <  SRR19973065.1352245/150‑1 (MQ=60)
                                                                                                                                           TATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGAT          >  SRR19973065.460627/1‑150 (MQ=60)
                                                                                                                                                 GGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATACCCGA    <  SRR19973065.168345/150‑1 (MQ=60)
                                                                                                                                                   AAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATACCCGAAA  >  SRR19973065.3016783/1‑150 (MQ=60)
                                                                                                                                                   |                                                                                                                                                     
ACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATACCCGAAA  >  CP009273/3182585‑3182881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑