Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F434 I0 R1 1130 215.9 7031662 97.1% 6827743 147.9

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCAT‑AA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCG  >  CP009273/2108077‑2108375
                                                                                                                                                       |                                                                                                                                                     
TCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCAT‑AA‑AAAAA                                                                                                                                                       <  SRR19973065.3156034/150‑1 (MQ=60)
     CACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTT                                                                                                                                                   >  SRR19973065.702736/1‑150 (MQ=60)
     CACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTT                                                                                                                                                   >  SRR19973065.702734/1‑150 (MQ=60)
        CGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCG                                                                                                                                                <  SRR19973065.1977106/150‑1 (MQ=60)
        CGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCG                                                                                                                                                >  SRR19973065.2664730/1‑150 (MQ=60)
         GCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGG                                                                                                                                               >  SRR19973065.1264293/1‑150 (MQ=60)
          CATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGT                                                                                                                                              >  SRR19973065.2029079/1‑150 (MQ=60)
            TGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTT                                                                                                                                            <  SRR19973065.1882621/150‑1 (MQ=60)
            TGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTT                                                                                                                                            <  SRR19973065.503916/150‑1 (MQ=60)
                 ATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGT                                                                                                                                       >  SRR19973065.1830741/1‑150 (MQ=60)
                 ATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGT                                                                                                                                       >  SRR19973065.1295466/1‑150 (MQ=60)
                    TGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTA                                                                                                                                    <  SRR19973065.942635/150‑1 (MQ=60)
                      CAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAAC                                                                                                                                  >  SRR19973065.1799928/1‑150 (MQ=60)
                         GAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTACCTCC                                                                                                                               <  SRR19973065.286311/150‑1 (MQ=60)
                          AGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCA                                                                                                                              >  SRR19973065.1823462/1‑150 (MQ=60)
                             CAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCG                                                                                                                           <  SRR19973065.1461854/150‑1 (MQ=60)
                                   TGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCAC                                                                                                                     <  SRR19973065.2093227/150‑1 (MQ=60)
                                      TTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCT                                                                                                                  >  SRR19973065.1604458/1‑150 (MQ=60)
                                      TTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCT                                                                                                                  >  SRR19973065.675831/1‑150 (MQ=60)
                                      TTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACGGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCT                                                                                                                  >  SRR19973065.401962/1‑150 (MQ=60)
                                          TTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCAT                                                                                                              >  SRR19973065.2264579/1‑150 (MQ=60)
                                            TTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCT                                                                                                            <  SRR19973065.1479975/150‑1 (MQ=60)
                                            TTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCT                                                                                                            <  SRR19973065.1515579/150‑1 (MQ=60)
                                            TTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCT                                                                                                            <  SRR19973065.3234173/150‑1 (MQ=60)
                                            TTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAAGGCGGGTCCAACTGTGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCT                                                                                                            <  SRR19973065.1515581/150‑1 (MQ=60)
                                            TTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTAAAAGTTCATGCTAAATGCGGGTCCAAATGAGGAGTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCT                                                                                                            <  SRR19973065.753148/150‑1 (MQ=60)
                                             TTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTC                                                                                                           <  SRR19973065.3138279/150‑1 (MQ=60)
                                             TTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTC                                                                                                           <  SRR19973065.3138202/150‑1 (MQ=60)
                                                GCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAAT                                                                                                        <  SRR19973065.3225669/150‑1 (MQ=60)
                                                GCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAAT                                                                                                        >  SRR19973065.3499177/1‑150 (MQ=60)
                                                GCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAAT                                                                                                        >  SRR19973065.3499208/1‑150 (MQ=60)
                                                 CCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATG                                                                                                       >  SRR19973065.513690/1‑150 (MQ=60)
                                                 CCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATG                                                                                                       >  SRR19973065.1265959/1‑150 (MQ=60)
                                                 CCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATG                                                                                                       >  SRR19973065.2485857/1‑150 (MQ=60)
                                                 CCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCAT‑AAGAAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATG                                                                                                       >  SRR19973065.512377/1‑150 (MQ=60)
                                                  CATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGT                                                                                                      <  SRR19973065.751157/150‑1 (MQ=60)
                                                  CATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATGTCGCATAAA‑AAAAATGTTGAGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCAACTCAATGT                                                                                                      >  SRR19973065.1022649/1‑150 (MQ=60)
                                                   ATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTT                                                                                                     <  SRR19973065.2933855/150‑1 (MQ=60)
                                                   ATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTT                                                                                                     <  SRR19973065.2933664/150‑1 (MQ=60)
                                                     AAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAG                                                                                                   <  SRR19973065.3054539/150‑1 (MQ=60)
                                                      AAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGT                                                                                                  >  SRR19973065.2874634/1‑150 (MQ=60)
                                                        AACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTA                                                                                                >  SRR19973065.3193295/1‑150 (MQ=60)
                                                        AACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTA                                                                                                >  SRR19973065.3193170/1‑150 (MQ=60)
                                                        AACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTA                                                                                                >  SRR19973065.1640107/1‑150 (MQ=60)
                                                         ACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAG                                                                                               <  SRR19973065.3435199/150‑1 (MQ=60)
                                                         ACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAG                                                                                               <  SRR19973065.872780/150‑1 (MQ=60)
                                                          CACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGC                                                                                              <  SRR19973065.22539/150‑1 (MQ=60)
                                                               CGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCAC                                                                                         >  SRR19973065.3201232/1‑150 (MQ=60)
                                                                    GTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGG                                                                                    >  SRR19973065.1060016/1‑150 (MQ=60)
                                                                    GTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGG                                                                                    <  SRR19973065.2302049/150‑1 (MQ=60)
                                                                     TCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGA                                                                                   >  SRR19973065.118700/1‑150 (MQ=60)
                                                                       TTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAA                                                                                 <  SRR19973065.1375576/150‑1 (MQ=60)
                                                                            GCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCA                                                                            >  SRR19973065.2535378/1‑150 (MQ=60)
                                                                             CATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCAT                                                                           <  SRR19973065.3333287/150‑1 (MQ=60)
                                                                             CATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCAT                                                                           <  SRR19973065.3333290/150‑1 (MQ=60)
                                                                              ATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATT                                                                          >  SRR19973065.465145/1‑150 (MQ=60)
                                                                              ATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATT                                                                          >  SRR19973065.464973/1‑150 (MQ=60)
                                                                              ATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATT                                                                          >  SRR19973065.1098044/1‑150 (MQ=60)
                                                                               TGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTC                                                                         <  SRR19973065.1429998/150‑1 (MQ=60)
                                                                                 TCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCC                                                                       <  SRR19973065.608549/150‑1 (MQ=60)
                                                                                 TCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCC                                                                       <  SRR19973065.847341/150‑1 (MQ=60)
                                                                                         CATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGA                                                               >  SRR19973065.1405837/1‑150 (MQ=60)
                                                                                          ATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCTCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGAT                                                              <  SRR19973065.181138/150‑1 (MQ=60)
                                                                                          ATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGAT                                                              <  SRR19973065.181129/150‑1 (MQ=60)
                                                                                            GCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTT                                                            <  SRR19973065.920263/150‑1 (MQ=60)
                                                                                               CAATGCGGGTCCAACTGAGGATTCCTTCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAA                                                         >  SRR19973065.2808262/1‑150 (MQ=60)
                                                                                               CAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAA                                                         >  SRR19973065.1299697/1‑150 (MQ=60)
                                                                                                   GCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCC                                                     <  SRR19973065.1542524/150‑1 (MQ=60)
                                                                                                    CGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCG                                                    <  SRR19973065.2165064/150‑1 (MQ=60)
                                                                                                       GTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGC                                                 >  SRR19973065.473275/1‑150 (MQ=60)
                                                                                                       GTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGC                                                 >  SRR19973065.473673/1‑150 (MQ=60)
                                                                                                           AACTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATT                                             >  SRR19973065.2442556/1‑150 (MQ=60)
                                                                                                             CTGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTA                                           >  SRR19973065.1182651/1‑150 (MQ=60)
                                                                                                              TGAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTAT                                          >  SRR19973065.333671/1‑150 (MQ=60)
                                                                                                               GAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATA                                         <  SRR19973065.1642585/150‑1 (MQ=60)
                                                                                                               GAGGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATA                                         <  SRR19973065.319771/150‑1 (MQ=60)
                                                                                                                AGGAGTCCTGCATCACCTTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAAGGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAA                                        <  SRR19973065.1927262/150‑1 (MQ=60)
                                                                                                                 GGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAG                                       <  SRR19973065.1923/150‑1 (MQ=60)
                                                                                                                 GGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAG                                       <  SRR19973065.2565114/150‑1 (MQ=60)
                                                                                                                 GGATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAG                                       <  SRR19973065.1183992/150‑1 (MQ=60)
                                                                                                                  GATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGC                                      >  SRR19973065.3317906/1‑150 (MQ=60)
                                                                                                                   ATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCA                                     <  SRR19973065.3230913/150‑1 (MQ=60)
                                                                                                                   ATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCA                                     <  SRR19973065.3230814/150‑1 (MQ=60)
                                                                                                                   ATTCCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCA                                     <  SRR19973065.3230804/150‑1 (MQ=60)
                                                                                                                      CCTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGA                                  <  SRR19973065.1264081/150‑1 (MQ=60)
                                                                                                                       CTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGAT                                 >  SRR19973065.69184/1‑150 (MQ=60)
                                                                                                                       CTGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGAT                                 <  SRR19973065.3390448/150‑1 (MQ=60)
                                                                                                                        TGCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATG                                <  SRR19973065.3225437/150‑1 (MQ=60)
                                                                                                                         GCATCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGA                               <  SRR19973065.1858244/150‑1 (MQ=60)
                                                                                                                            TCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTA                            <  SRR19973065.1009447/150‑1 (MQ=60)
                                                                                                                            TCACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTA                            <  SRR19973065.2774463/150‑1 (MQ=60)
                                                                                                                             CACATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTAT                           >  SRR19973065.510475/1‑150 (MQ=60)
                                                                                                                               CATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTA                         <  SRR19973065.1961090/150‑1 (MQ=60)
                                                                                                                               CATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTA                         <  SRR19973065.1961095/150‑1 (MQ=60)
                                                                                                                                ATTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTAT                        <  SRR19973065.2683140/150‑1 (MQ=60)
                                                                                                                                 TTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATC                       <  SRR19973065.2329835/150‑1 (MQ=60)
                                                                                                                                 TTGATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATC                       <  SRR19973065.553735/150‑1 (MQ=60)
                                                                                                                                    ATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAG                    >  SRR19973065.1772339/1‑150 (MQ=60)
                                                                                                                                    ATATTTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAG                    >  SRR19973065.2347698/1‑150 (MQ=60)
                                                                                                                                        TTCGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGA                >  SRR19973065.1159919/1‑150 (MQ=60)
                                                                                                                                          CGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAAT              <  SRR19973065.2432302/150‑1 (MQ=60)
                                                                                                                                          CGCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAAT              <  SRR19973065.2431299/150‑1 (MQ=60)
                                                                                                                                           GCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATA             >  SRR19973065.1617043/1‑150 (MQ=60)
                                                                                                                                           GCATAAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATA             >  SRR19973065.3366370/1‑150 (MQ=60)
                                                                                                                                              taAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCA          >  SRR19973065.1827701/3‑150 (MQ=60)
                                                                                                                                              taAA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCA          >  SRR19973065.1827776/3‑150 (MQ=60)
                                                                                                                                                AA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATT        >  SRR19973065.2136640/1‑150 (MQ=60)
                                                                                                                                                AA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATT        >  SRR19973065.2136616/1‑150 (MQ=60)
                                                                                                                                                    AAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCAC     >  SRR19973065.2632304/1‑150 (MQ=60)
                                                                                                                                                    AAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCAC     >  SRR19973065.431739/1‑150 (MQ=60)
                                                                                                                                                       ATGTTGCGGTTTGTTGTGTGACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCG  <  SRR19973065.1966677/150‑1 (MQ=60)
                                                                                                                                                       ATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCG  <  SRR19973065.352578/150‑1 (MQ=60)
                                                                                                                                                       |                                                                                                                                                     
TCATTCACCGCATGAACATTTGCAAGAGACAGCAGTGTTTCTTTTTTCGCCATAAAAACACCACGAACGTCTTTGCGCATGTCAAAGTTCATGCTCAATGCGGGTCCAACTGAGGATTCCTGCATCACATTGATATTTCGCAT‑AA‑AAAAATGTTGCGGTTTGTTGTGTAACTCCAGCGACGCACGCTTCATCTCAATGTTAGTTAGCGCCACAAAGGAAACAGCATTCCCGGCGGAGATTTGAATGCCGCGCAATTTATAAGCAAGATGAGTATTATCCAGTTGAATATCATTCACCCG  >  CP009273/2108077‑2108375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑