Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F247 I0 R1
|
1496 |
299.8 |
9582018 |
97.8% |
9371213 |
149.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
512,872 |
A→T |
5.3% |
intergenic (+54/+9) |
fetB → / ← ybbN |
iron exporter permease subunit, ABC transporter FetAB; peroxide resistance protein/DnaK co‑chaperone, thioredoxin‑like protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 512,872 | 0 | A | T | 5.3%
| 867.7
/ 27.8
| 265 | intergenic (+54/+9) | fetB/ybbN | iron exporter permease subunit, ABC transporter FetAB; peroxide resistance protein/DnaK co‑chaperone, thioredoxin‑like protein |
| Reads supporting (aligned to +/- strand): ref base A (137/114); new base T (8/6); total (145/120) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 272 total aligned reads displayed.
CCAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGAACA > CP009273/512724‑513020
|
cAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCaa < 1:1554456/149‑1 (MQ=255)
aGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAAc > 2:2092841/1‑149 (MQ=255)
gCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCTACg > 1:2813305/1‑149 (MQ=255)
gCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACg > 2:2898052/1‑149 (MQ=255)
ttGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGa > 2:1104701/1‑149 (MQ=255)
gTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAat < 2:4724646/149‑1 (MQ=255)
cGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATACTTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAatat < 2:3710457/149‑1 (MQ=255)
aCCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCa > 2:2697228/1‑149 (MQ=255)
cATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAAt > 2:3156621/1‑149 (MQ=255)
cATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAAt < 1:3675985/149‑1 (MQ=255)
attattGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATa > 1:2228302/1‑149 (MQ=255)
ttGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATacaac > 1:2875830/1‑149 (MQ=255)
tGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCTACGGAATATCAATacaaca > 1:1922123/1‑149 (MQ=255)
cTGCTATTTAACCTATCGTAAGTTTTATAAGTCGCGCCACCAGTTGGTGGGGACGCAAGTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCCATACAACAATg < 2:2532672/149‑1 (MQ=255)
tGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGc > 2:3744281/1‑149 (MQ=255)
gCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCa < 1:2073486/149‑1 (MQ=255)
cTATTTAACCTATCGTAAGTTTTATACTTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCAt < 2:4766279/149‑1 (MQ=255)
cTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCAt < 2:3225176/149‑1 (MQ=255)
aTTTAACCTATCGTCAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATAc < 2:3265751/149‑1 (MQ=255)
aTTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATAc < 1:275605/149‑1 (MQ=255)
aaCCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGCAGAAATGATGCGATGCCGGATGCGCAGCATCGCAACCGGCGTGGTGGTTCATGTGCCGATCAACGGAATATCACTACAACAATGCATACAGCt > 2:3494811/1‑149 (MQ=255)
aaCCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACCATGCATACAGCt > 1:31268/1‑149 (MQ=255)
ccTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTgg > 2:4445108/1‑149 (MQ=255)
ccTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTgg < 1:1000488/149‑1 (MQ=255)
ccTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTgg > 2:76002/1‑149 (MQ=255)
cTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCTACGGAATATCAATACAACAATGCATACAGCTggc < 1:3192256/149‑1 (MQ=255)
cTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTggc < 1:2034/149‑1 (MQ=255)
cTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTggc < 1:2994731/149‑1 (MQ=255)
cTATCGGAAGTTTGATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTggc < 2:4351774/149‑1 (MQ=255)
tATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTggcg > 1:3574878/1‑149 (MQ=255)
gTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACt < 2:2358590/149‑1 (MQ=255)
tttATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCTACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTc > 1:3656379/1‑149 (MQ=255)
ttATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGACTATCAATACAACAATGCATACAGCTGGCGGCGATACTTCg > 2:2961157/1‑149 (MQ=255)
tataATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGa > 2:4477292/1‑149 (MQ=255)
tataATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGa > 2:2281149/1‑149 (MQ=255)
tataATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGa > 1:2852670/1‑149 (MQ=255)
taATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACg > 2:3411108/1‑149 (MQ=255)
taATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACg > 2:2395377/1‑149 (MQ=255)
ttCGCGCCACCAGTTGGTGGTGACGCAATTGAAGGAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCa > 1:1389639/1‑149 (MQ=255)
tCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAg > 1:105407/1‑149 (MQ=255)
cgcCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGc > 1:2300976/1‑149 (MQ=255)
ccaccaGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCAt > 1:1589711/1‑149 (MQ=255)
ccaccaGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCAt > 1:3733114/1‑149 (MQ=255)
caccaGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATc < 1:3757408/149‑1 (MQ=255)
accaGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCa > 1:1189898/1‑149 (MQ=255)
caGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCAcc > 2:3456864/1‑149 (MQ=255)
gTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCg > 2:3611093/1‑149 (MQ=255)
gTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCg > 2:4123155/1‑149 (MQ=255)
tggtgACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTAccc < 2:2454583/149‑1 (MQ=255)
tggtgACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTAccc < 1:1849949/149‑1 (MQ=255)
tggtgACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTAccc < 2:61376/149‑1 (MQ=255)
ggtgACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCca < 1:635221/149‑1 (MQ=255)
ttGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAg < 1:2559023/149‑1 (MQ=255)
ttGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAg > 2:2308080/1‑149 (MQ=255)
tGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAgg < 2:2510685/149‑1 (MQ=255)
agaagaaATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGAtc < 2:930066/149‑1 (MQ=255)
gaagaaATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGAtct > 1:1957337/1‑149 (MQ=255)
gaagaaATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGAtct > 1:2730971/1‑149 (MQ=255)
gaagaaATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGAtct < 2:3963212/149‑1 (MQ=255)
gaagaaATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGAtct < 2:3963274/149‑1 (MQ=255)
agaaATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTcc < 1:4176486/149‑1 (MQ=255)
agaaATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTcc < 2:4636661/149‑1 (MQ=255)
gaaATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCt < 2:1506868/149‑1 (MQ=255)
tgcCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTAc < 1:3874257/149‑1 (MQ=255)
tgcCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTAc < 1:4721046/149‑1 (MQ=255)
tgcCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATACATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTAc < 1:4192940/149‑1 (MQ=255)
gcCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTAcg > 1:2602394/1‑149 (MQ=255)
cGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTAcgcg < 2:494525/149‑1 (MQ=255)
ggATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGt > 2:3748371/1‑149 (MQ=255)
gATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTc < 2:2207700/149‑1 (MQ=255)
gATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTc > 1:2117030/1‑149 (MQ=255)
aTGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCt > 1:3022318/1‑149 (MQ=255)
aTGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCt < 1:3238963/149‑1 (MQ=255)
aTGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCt < 2:1768806/149‑1 (MQ=255)
agcaTCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGt > 1:4595186/1‑149 (MQ=255)
gcatcgcatcCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTc > 1:511293/1‑149 (MQ=255)
catcgcatcCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCt > 1:4302664/1‑149 (MQ=255)
catcCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTgcggc > 2:4165662/1‑149 (MQ=255)
catcCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTgcggc < 1:4529887/149‑1 (MQ=255)
catcCGGCGTTGTGGGTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTgcggc < 1:1410787/149‑1 (MQ=255)
tcCGGCGTTGTGGTTCATGTGCCGATCTACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGcggcgg < 1:719245/149‑1 (MQ=255)
tcCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCCGCCCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGcggcgg > 1:1670010/1‑149 (MQ=255)
tcCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGcggcgg > 1:2443120/1‑149 (MQ=255)
gCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTgag > 2:2576297/1‑149 (MQ=255)
cGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTgaga < 1:662030/149‑1 (MQ=255)
gTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGAt > 2:1013343/1‑149 (MQ=255)
tgtgGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCt < 2:2054915/149‑1 (MQ=255)
gtgGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCtt > 2:151760/1‑149 (MQ=255)
gtgGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCtt > 2:548329/1‑149 (MQ=255)
cATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCa > 1:561723/1‑149 (MQ=255)
tgtgCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGa < 2:1660357/149‑1 (MQ=255)
gtgCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGAt > 1:4019855/1‑149 (MQ=255)
gcagATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCTTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCTGCGGTGAGATCTTTACGCAGAAGc > 2:106867/4‑149 (MQ=255)
aTCTACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGa > 2:143876/1‑149 (MQ=255)
aTCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGa > 1:1830861/1‑149 (MQ=255)
aTCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGa > 2:2870872/1‑149 (MQ=255)
aTCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGa > 1:152972/1‑149 (MQ=255)
tCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGaa < 1:1238859/149‑1 (MQ=255)
cAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGAAc < 2:1234828/149‑1 (MQ=255)
aaCGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGAACa < 2:3582767/149‑1 (MQ=255)
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CCAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGGCGATACTTCGACGCCAGTGCATCACCCGTACCCAGCGCAGCGAGGATCTCCTGGAACGTTTTACGCGTCTGACCGTCTGCGGCGGTGAGATCTTTACGCAGATGCCCGAACA > CP009273/512724‑513020
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
