Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F218 I0 R1	1506	278.7	9275112	94.5%	8764980	150.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	1,997,314	G→T	100%	intergenic (‑227/‑39)	fliC ← / → fliD	flagellar filament structural protein (flagellin)/flagellar filament capping protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,997,314	0	G	T	97.3%	835.9 / 10.0	256	intergenic (‑227/‑39)	fliC/fliD	flagellar filament structural protein (flagellin)/flagellar filament capping protein
Reads supporting (aligned to +/- strand): ref base G (3/4); new base T (130/119); total (133/123)
Fisher's exact test for biased strand distribution p-value = 7.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01
Rejected as polymorphism: Frequency below/above cutoff threshold.

Only 100 of 257 total aligned reads displayed.

TATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTTCAAAT  >  CP009273/1997165‑1997457

      cTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTATATTc                                                                                                                                           <  2:1902361/150‑1 (MQ=255)

       tGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCg                                                                                                                                          <  1:1439908/150‑1 (MQ=255)

          cGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGttt                                                                                                                                       <  1:1450161/150‑1 (MQ=255)

             aatacaacCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTAc                                                                                                                                    <  2:1548738/147‑1 (MQ=255)

             aaaaCAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCATACCGATAACCCCTGTATTCGTTTTAc                                                                                                                                    >  2:1873136/1‑150 (MQ=255)

             aaaaCAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTAc                                                                                                                                    >  2:3070592/1‑150 (MQ=255)

             aaaaCAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTAc                                                                                                                                    >  1:194533/1‑150 (MQ=255)

                acaacCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACgtg                                                                                                                                 >  1:2187670/1‑150 (MQ=255)

                  aacCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTc                                                                                                                               <  2:2407294/150‑1 (MQ=255)

                   acCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCg                                                                                                                              <  2:3835095/150‑1 (MQ=255)

                   acCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCg                                                                                                                              <  2:1706878/150‑1 (MQ=255)

                     cTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGaa                                                                                                                            >  2:2894417/1‑150 (MQ=255)

                       ttAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAg                                                                                                                          >  2:1448810/1‑150 (MQ=255)

                       ttAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAg                                                                                                                          >  2:1448887/1‑150 (MQ=255)

                       ttAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAg                                                                                                                          >  1:476670/1‑150 (MQ=255)

                        tAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGa                                                                                                                         >  1:3068792/1‑150 (MQ=255)

                         aGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGAt                                                                                                                        >  1:4538439/1‑150 (MQ=255)

                          gAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATa                                                                                                                       >  1:2832778/1‑150 (MQ=255)

                           aaTTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATaa                                                                                                                      <  2:2532938/150‑1 (MQ=255)

                           aaTTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATaa                                                                                                                      >  1:1045888/1‑150 (MQ=255)

                              ttttttCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAg                                                                                                                   <  1:2943453/150‑1 (MQ=255)

                                 tttCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGaa                                                                                                                >  2:2660814/1‑150 (MQ=255)

                                   tCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAAt                                                                                                              >  1:1505860/1‑150 (MQ=255)

                                   tCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAAt                                                                                                              <  2:219760/150‑1 (MQ=255)

                                   tCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAAt                                                                                                              >  1:4633951/1‑150 (MQ=255)

                                    cAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATc                                                                                                             <  1:3575463/150‑1 (MQ=255)

                                    cAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATc                                                                                                             <  2:4106773/150‑1 (MQ=255)

                                      aaaaCAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGc                                                                                                           >  1:1382421/1‑150 (MQ=255)

                                          cAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATgg                                                                                                       >  2:1297799/1‑150 (MQ=255)

                                          cAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATgg                                                                                                       <  2:665370/150‑1 (MQ=255)

                                           aGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATTAAAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATgg                                                                                                       >  1:4399710/1‑150 (MQ=255)

                                            gCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCa                                                                                                     >  1:609615/1‑150 (MQ=255)

                                            gCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCa                                                                                                     <  1:1640036/150‑1 (MQ=255)

                                               aTTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGt                                                                                                  >  1:3288745/1‑150 (MQ=255)

                                                ttttttGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTa                                                                                                 <  2:2342109/150‑1 (MQ=255)

                                                ttttttGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTa                                                                                                 <  2:4469561/150‑1 (MQ=255)

                                                 tttttGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCACTTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTAt                                                                                                <  2:3360873/150‑1 (MQ=255)

                                                    ttGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTGTTTc                                                                                             <  2:3555525/150‑1 (MQ=255)

                                                    ttGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTc                                                                                             >  2:1014594/1‑150 (MQ=255)

                                                    ttGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTc                                                                                             >  2:1582165/1‑150 (MQ=255)

                                                      gTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCAt                                                                                           <  2:4530474/150‑1 (MQ=255)

                                                        tAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCg                                                                                         >  2:375423/1‑150 (MQ=255)

                                                          gTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCt                                                                                       <  1:3532489/150‑1 (MQ=255)

                                                             gCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTggg                                                                                    <  2:4201050/150‑1 (MQ=255)

                                                             gCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTggg                                                                                    >  2:258554/1‑150 (MQ=255)

                                                             gCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTggg                                                                                    >  2:840960/1‑150 (MQ=255)

                                                             gCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGAGAAAAGGAAATCGCATGGCAAGTATTTCATCGCTggg                                                                                    >  2:127925/1‑150 (MQ=255)

                                                               cGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAg                                                                                  >  1:1169587/1‑150 (MQ=255)

                                                               cGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAg                                                                                  >  1:1250398/1‑150 (MQ=255)

                                                               cGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAg                                                                                  >  1:4133318/1‑150 (MQ=255)

                                                                gAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGt                                                                                 >  1:1816768/1‑150 (MQ=255)

                                                                gAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGt                                                                                 >  2:3007310/1‑150 (MQ=255)

                                                                     aCTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAACCGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGt                                                                            <  2:2406415/150‑1 (MQ=255)

                                                                     aCTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGt                                                                            >  1:3176419/1‑150 (MQ=255)

                                                                      ctctTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTc                                                                           >  1:1880266/1‑150 (MQ=255)

                                                                        ctTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAg                                                                         >  2:4612451/1‑150 (MQ=255)

                                                                           ttCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTc                                                                      >  1:3480925/1‑150 (MQ=255)

                                                                           ttCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTc                                                                      >  1:3824273/1‑150 (MQ=255)

                                                                            tctcTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCt                                                                     >  2:3510957/1‑150 (MQ=255)

                                                                             ctctGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTg                                                                    <  1:893273/150‑1 (MQ=255)

                                                                             ctctGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTg                                                                    >  2:1793160/1‑150 (MQ=255)

                                                                                tGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGAt                                                                 <  1:2144655/150‑1 (MQ=255)

                                                                                 gCCCCTTATTCCCGCTATT‑AAAAAAAACAATTACACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGAtt                                                                <  2:1479463/150‑1 (MQ=255)

                                                                                 gCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGAtt                                                                <  1:810212/150‑1 (MQ=255)

                                                                                  ccccTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGAttt                                                               <  2:2001037/150‑1 (MQ=255)

                                                                                   cccTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTa                                                              >  2:3418346/1‑150 (MQ=255)

                                                                                    ccTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTaa                                                             >  2:3912469/1‑150 (MQ=255)

                                                                                       tATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGtt                                                          >  2:224259/1‑150 (MQ=255)

                                                                                        aTTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTc                                                         >  2:2732943/1‑150 (MQ=255)

                                                                                        aTTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTc                                                         >  2:2733023/1‑150 (MQ=255)

                                                                                          tCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCa                                                       <  1:4516245/150‑1 (MQ=255)

                                                                                                tATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTg                                                 >  1:2903386/1‑150 (MQ=255)

                                                                                                tATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAAGTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTg                                                 <  1:4073704/150‑1 (MQ=255)

                                                                                                 aTT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGa                                                <  2:641483/150‑1 (MQ=255)

                                                                                                 aTT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGa                                                >  2:1672070/1‑150 (MQ=255)

                                                                                                  tt‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGAt                                               <  2:2689848/150‑1 (MQ=255)

                                                                                                  tt‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGAt                                               <  2:3140063/150‑1 (MQ=255)

                                                                                                      aaaaaaaCAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGc                                            >  1:3244176/1‑150 (MQ=255)

                                                                                                         aaaaCAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTc                                         >  2:1373565/1‑150 (MQ=255)

                                                                                                          aaaCAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCa                                        >  2:4426543/1‑150 (MQ=255)

                                                                                                             cAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCAccg                                     >  1:2524521/1‑150 (MQ=255)

                                                                                                              aaTTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCAccgc                                    >  1:3036744/1‑150 (MQ=255)

                                                                                                               aTTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCAccgcc                                   <  1:114635/150‑1 (MQ=255)

                                                                                                               aTTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCAccgcc                                   >  2:3266122/1‑150 (MQ=255)

                                                                                                                ttAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCAccgccg                                  >  1:2814808/1‑150 (MQ=255)

                                                                                                                        aaaCTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCaaaaa                          >  2:4587398/1‑150 (MQ=255)

                                                                                                                        aaaCTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCaaaaa                          >  2:2942141/1‑150 (MQ=255)

                                                                                                                        aaaCTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCaaaaa                          >  1:1996289/1‑150 (MQ=255)

                                                                                                                        aaaCTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCaaaaa                          >  2:3124247/1‑150 (MQ=255)

                                                                                                                         aaCTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAg                         <  1:3658940/150‑1 (MQ=255)

                                                                                                                         aaCTTTGCGCAATTCAGACCGATAACACCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAg                         <  1:3975203/150‑1 (MQ=255)

                                                                                                                             ttGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGAc                     <  1:3888122/150‑1 (MQ=255)

                                                                                                                              tGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACg                    <  2:2232854/150‑1 (MQ=255)

                                                                                                                                  cAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTaa                <  2:3966749/150‑1 (MQ=255)

                                                                                                                                  cAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTaa                >  2:3189678/1‑150 (MQ=255)

                                                                                                                                  aaaTTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGTTTTTAAGTTCCATCCTTGATAGCCTCCCCGCCGCGCAAAAAGCGACGCTaa                <  1:61020/149‑1 (MQ=255)

                                                                                                                                   aaTTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAAc               >  1:312093/1‑150 (MQ=255)

                                                                                                                                    aTTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAAcc              >  1:3818308/1‑150 (MQ=255)

                                                                                                                                    aTTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAAcc              >  2:2444417/1‑150 (MQ=255)

                                                                                                                                          aCCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAATTTTTTCATCGATGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGAAAAAAGCGACGCTAACCCCCAtt        <  2:1488645/150‑1 (MQ=255)

TATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTTCAAAT  >  CP009273/1997165‑1997457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTTCAAATCAGCA  >  CP009273/1997165‑1997462

TATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCT                                                                                                                                                      <  SRR19973073.3508580/150‑1 (MQ=60)

TATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCT                                                                                                                                                      <  SRR19973073.1187812/150‑1 (MQ=60)

TATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCT                                                                                                                                                      <  SRR19973073.1195650/150‑1 (MQ=60)

 ATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTG                                                                                                                                                     >  SRR19973073.3613557/1‑150 (MQ=60)

 ATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTG                                                                                                                                                     >  SRR19973073.1029370/1‑150 (MQ=60)

 ATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTG                                                                                                                                                     <  SRR19973073.1470713/150‑1 (MQ=60)

 ATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTG                                                                                                                                                     <  SRR19973073.1470706/150‑1 (MQ=60)

    GTCTGTCGTAAAACCACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCTCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTAT                                                                                                                                                  <  SRR19973073.3628002/150‑1 (MQ=60)

    GTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTAT                                                                                                                                                  <  SRR19973073.3627993/150‑1 (MQ=60)

     TCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATT                                                                                                                                                 >  SRR19973073.218926/1‑150 (MQ=60)

       TGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCG                                                                                                                                               <  SRR19973073.1442942/150‑1 (MQ=60)

       TGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCG                                                                                                                                               <  SRR19973073.1443172/150‑1 (MQ=60)

          CGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTT                                                                                                                                            <  SRR19973073.1453178/150‑1 (MQ=60)

          CGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTT                                                                                                                                            <  SRR19973073.1453208/150‑1 (MQ=60)

           TTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTT                                                                                                                                           <  SRR19973073.2918235/150‑1 (MQ=60)

           GTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTT                                                                                                                                           <  SRR19973073.1677116/150‑1 (MQ=60)

            TAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTA                                                                                                                                          <  SRR19973073.138608/150‑1 (MQ=60)

             AAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTAC                                                                                                                                         >  SRR19973073.194990/1‑150 (MQ=60)

                ACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTG                                                                                                                                      >  SRR19973073.2192233/1‑150 (MQ=60)

                   ACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCG                                                                                                                                   >  SRR19973073.4240952/1‑150 (MQ=60)

                   ACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCG                                                                                                                                   <  SRR19973073.158222/150‑1 (MQ=60)

                     CTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAA                                                                                                                                 <  SRR19973073.2561603/150‑1 (MQ=60)

                       TTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAG                                                                                                                               >  SRR19973073.477683/1‑150 (MQ=60)

                       TTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAG                                                                                                                               <  SRR19973073.1544052/150‑1 (MQ=60)

                       TTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAG                                                                                                                               >  SRR19973073.477457/1‑150 (MQ=60)

                        TAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGA                                                                                                                              >  SRR19973073.3074966/1‑150 (MQ=60)

                         AGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGAT                                                                                                                             >  SRR19973073.4547539/1‑150 (MQ=60)

                          GAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATA                                                                                                                            >  SRR19973073.2838588/1‑150 (MQ=60)

                          GAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATA                                                                                                                            >  SRR19973073.2838583/1‑150 (MQ=60)

                           AATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAA                                                                                                                           >  SRR19973073.1048069/1‑150 (MQ=60)

                           AATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAAGTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAA                                                                                                                           <  SRR19973073.2077497/150‑1 (MQ=60)

                              TTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAG                                                                                                                        <  SRR19973073.2949496/150‑1 (MQ=60)

                              TTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAG                                                                                                                        <  SRR19973073.2949465/150‑1 (MQ=60)

                               TTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGG                                                                                                                       >  SRR19973073.3531104/1‑150 (MQ=60)

                                TTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGA                                                                                                                      >  SRR19973073.1884968/1‑150 (MQ=60)

                                TTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTAAGTGTCGAAAGATAAAAGGA                                                                                                                      >  SRR19973073.1885079/1‑150 (MQ=60)

                                  TTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAA                                                                                                                    >  SRR19973073.2900854/1‑150 (MQ=60)

                                  TTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAA                                                                                                                    <  SRR19973073.3978268/150‑1 (MQ=60)

                                   TCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAAT                                                                                                                   >  SRR19973073.1508972/1‑150 (MQ=60)

                                   TCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAAT                                                                                                                   >  SRR19973073.4643190/1‑150 (MQ=60)

                                    CAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGCCCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATC                                                                                                                  <  SRR19973073.3252691/150‑1 (MQ=60)

                                    CAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATC                                                                                                                  <  SRR19973073.3582526/150‑1 (MQ=60)

                                    CAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATC                                                                                                                  <  SRR19973073.3582627/150‑1 (MQ=60)

                                    CAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATC                                                                                                                  >  SRR19973073.1992251/1‑150 (MQ=60)

                                      AAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGC                                                                                                                >  SRR19973073.1385348/1‑150 (MQ=60)

                                           AGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATTAAAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGG                                                                                                            >  SRR19973073.4408543/1‑150 (MQ=60)

                                           AGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAGAGATAAAAGGAAATCGCATGGC                                                                                                           >  SRR19973073.164878/1‑150 (MQ=60)

                                            GCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCA                                                                                                          >  SRR19973073.610917/1‑150 (MQ=60)

                                            GCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCA                                                                                                          >  SRR19973073.610967/1‑150 (MQ=60)

                                            GCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCA                                                                                                          <  SRR19973073.1643432/150‑1 (MQ=60)

                                               ATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGT                                                                                                       >  SRR19973073.3295401/1‑150 (MQ=60)

                                                 TTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTAT                                                                                                     <  SRR19973073.2234867/150‑1 (MQ=60)

                                                        TAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCG                                                                                              >  SRR19973073.3814196/1‑150 (MQ=60)

                                                          GTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCT                                                                                            <  SRR19973073.3539561/150‑1 (MQ=60)

                                                           TCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTG                                                                                           >  SRR19973073.1137806/1‑150 (MQ=60)

                                                               CGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAG                                                                                       >  SRR19973073.1253012/1‑150 (MQ=60)

                                                               CGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAG                                                                                       >  SRR19973073.1171974/1‑150 (MQ=60)

                                                               CGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAG                                                                                       >  SRR19973073.4141586/1‑150 (MQ=60)

                                                               CGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAG                                                                                       >  SRR19973073.1171837/1‑150 (MQ=60)

                                                               CGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAG                                                                                       >  SRR19973073.1171833/1‑150 (MQ=60)

                                                                GAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGT                                                                                      >  SRR19973073.1820525/1‑150 (MQ=60)

                                                                   ATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGG                                                                                   >  SRR19973073.4058987/1‑150 (MQ=60)

                                                                   ATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGG                                                                                   >  SRR19973073.2961870/1‑150 (MQ=60)

                                                                     ACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGT                                                                                 >  SRR19973073.3182824/1‑150 (MQ=60)

                                                                      CTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTC                                                                                >  SRR19973073.1884106/1‑150 (MQ=60)

                                                                       TCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCA                                                                               <  SRR19973073.3880141/150‑1 (MQ=60)

                                                                       TCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAAGTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCA                                                                               <  SRR19973073.4126123/150‑1 (MQ=60)

                                                                           TTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTC                                                                           <  SRR19973073.3082300/150‑1 (MQ=60)

                                                                           TTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTC                                                                           >  SRR19973073.3831848/1‑150 (MQ=60)

                                                                           TTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTC                                                                           >  SRR19973073.3831882/1‑150 (MQ=60)

                                                                           TTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTC                                                                           >  SRR19973073.3487852/1‑150 (MQ=60)

                                                                             CTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTG                                                                         <  SRR19973073.895120/150‑1 (MQ=60)

                                                                             CTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTG                                                                         <  SRR19973073.895131/150‑1 (MQ=60)

                                                                               CTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGA                                                                       >  SRR19973073.3206547/1‑150 (MQ=60)

                                                                                TGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGAT                                                                      <  SRR19973073.2149139/150‑1 (MQ=60)

                                                                                TGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGAT                                                                      <  SRR19973073.146118/150‑1 (MQ=60)

                                                                                 GCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATT                                                                     <  SRR19973073.811860/150‑1 (MQ=60)

                                                                                        ATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTC                                                              <  SRR19973073.3069688/150‑1 (MQ=60)

                                                                                          TCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCA                                                            <  SRR19973073.4525314/150‑1 (MQ=60)

                                                                                           CCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCAT                                                           >  SRR19973073.4530507/1‑150 (MQ=60)

                                                                                           CCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCAT                                                           >  SRR19973073.2071033/1‑150 (MQ=60)

                                                                                              GCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCT                                                        <  SRR19973073.1335330/150‑1 (MQ=60)

                                                                                              GCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCT                                                        <  SRR19973073.1335339/150‑1 (MQ=60)

                                                                                               CTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTT                                                       <  SRR19973073.2598312/150‑1 (MQ=60)

                                                                                               CTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTT                                                       >  SRR19973073.3120311/1‑150 (MQ=60)

                                                                                                TATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTG                                                      >  SRR19973073.2909315/1‑150 (MQ=60)

                                                                                                TATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAAGTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTG                                                      <  SRR19973073.4081856/150‑1 (MQ=60)

                                                                                                 ATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGA                                                     <  SRR19973073.3419350/150‑1 (MQ=60)

                                                                                                 ATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGA                                                     >  SRR19973073.4457214/1‑150 (MQ=60)

                                                                                                 ATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGA                                                     <  SRR19973073.3527099/150‑1 (MQ=60)

                                                                                                  TT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGAT                                                    <  SRR19973073.610530/150‑1 (MQ=60)

                                                                                                  TT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGAT                                                    <  SRR19973073.610532/150‑1 (MQ=60)

                                                                                                      AAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGC                                                 >  SRR19973073.3250731/1‑150 (MQ=60)

                                                                                                      AAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGC                                                 >  SRR19973073.3250773/1‑150 (MQ=60)

                                                                                                        AAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCT                                               >  SRR19973073.4640763/1‑150 (MQ=60)

                                                                                                        AAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCT                                               >  SRR19973073.4640750/1‑150 (MQ=60)

                                                                                                        AAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCT                                               <  SRR19973073.744368/150‑1 (MQ=60)

                                                                                                          AAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCA                                             <  SRR19973073.4360067/150‑1 (MQ=60)

                                                                                                             CAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCG                                          >  SRR19973073.2529738/1‑150 (MQ=60)

                                                                                                              AATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGC                                         >  SRR19973073.3042880/1‑150 (MQ=60)

                                                                                                              AATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGC                                         >  SRR19973073.1882011/1‑150 (MQ=60)

                                                                                                               ATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCC                                        <  SRR19973073.114915/150‑1 (MQ=60)

                                                                                                                TTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCG                                       >  SRR19973073.2820579/1‑150 (MQ=60)

                                                                                                                 TAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGC                                      <  SRR19973073.121943/150‑1 (MQ=60)

                                                                                                                    ACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGTCTCACCGCCGCGCA                                   <  SRR19973073.844410/150‑1 (MQ=60)

                                                                                                                    ACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCA                                   <  SRR19973073.3162179/150‑1 (MQ=60)

                                                                                                                    ACGTAAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCA                                   <  SRR19973073.3162175/150‑1 (MQ=60)

                                                                                                                        AAACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAA                               >  SRR19973073.2000430/1‑150 (MQ=60)

                                                                                                                         AACTTTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAG                              <  SRR19973073.3666285/150‑1 (MQ=60)

                                                                                                                         AACTTTGCGCAATTCAGACCGATAACACCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAG                              <  SRR19973073.3983127/150‑1 (MQ=60)

                                                                                                                             TTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGAC                          <  SRR19973073.872685/150‑1 (MQ=60)

                                                                                                                             TTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGAC                          <  SRR19973073.3895839/150‑1 (MQ=60)

                                                                                                                             TTGCGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGAC                          <  SRR19973073.3895779/150‑1 (MQ=60)

                                                                                                                                CGCAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCT                       >  SRR19973073.4523534/1‑150 (MQ=60)

                                                                                                                                  AAATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGTTTTTAAGTTCCATCCTTGATAGCCTCCCCGCCGCGCAAAAAGCGACGCTAA                     <  SRR19973073.61192/150‑1 (MQ=60)

                                                                                                                                   AATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAAC                    >  SRR19973073.312742/1‑150 (MQ=60)

                                                                                                                                    ATTCAGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACC                   >  SRR19973073.3825914/1‑150 (MQ=60)

                                                                                                                                       CAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCC                >  SRR19973073.3700458/1‑150 (MQ=60)

                                                                                                                                        AGACCGATAACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCA               >  SRR19973073.2358378/1‑150 (MQ=60)

                                                                                                                                           CCGATAACCCCTGTATTCTTTTTACGTGTCGAAATATAAAAGGAAATCGCTTGGCATGTATTTCATCGCTGGGTGTGGGGTATGGTCTGTTTTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTT            <  SRR19973073.4042465/150‑1 (MQ=60)

                                                                                                                                            CGATAACCCCTGTATTCGTTTTACGTGTCTAAATATAAAAGGAAATCGCTTGGAATGTATTTCATCGCTGGGAGTCGGGTCTGGTCTGGATTTAAGTTCCATCCTTTATAGCCTCACCGCCGCGAAAAAAGCGACGCTAACCCCCATTTC           <  SRR19973073.2900327/150‑1 (MQ=60)

                                                                                                                                                AACCCCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCTACGCTAACCCCCATTTCAAAT       >  SRR19973073.726475/1‑150 (MQ=60)

                                                                                                                                                    CCTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTTCAAATCAGC   >  SRR19973073.2393690/1‑150 (MQ=60)

                                                                                                                                                     CTGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTTCAAATCAGCA  >  SRR19973073.3440260/1‑150 (MQ=60)

TATCGTCTGTCGTAAAACAACCTTTAGAATTTTTTTCAAAAACAGCCATTTTTTGTTAGTCGCCGAAATACTCTTTTCTCTGCCCCTTATTCCCGCTATT‑AAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGACCGATAACCCCGGTATTCGTTTTACGTGTCGAAAGATAAAAGGAAATCGCATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTTCAAATCAGCA  >  CP009273/1997165‑1997462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`