Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F159 I0 R1
|
879 |
305.9 |
9588012 |
96.6% |
9262019 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
3,191,839 |
T→A |
25.0% |
N388Y (AAC→TAC) |
glnE ← |
fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 3,191,839 | 0 | T | A | 25.0%
| 609.4
/ 248.1
| 308 | N388Y (AAC→TAC) | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base T (100/130); new base A (36/41); total (137/171) |
| Fisher's exact test for biased strand distribution p-value = 6.91e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.17e-01 |
Only 100 of 314 total aligned reads displayed.
GCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCG > CP009273/3191690‑3191987
|
aatcaatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAAt > 1:2263299/1‑150 (MQ=255)
atcaatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATg > 1:2352642/1‑150 (MQ=255)
tcaatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGc > 1:2201719/1‑150 (MQ=255)
caatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCt < 2:4086472/150‑1 (MQ=255)
aatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCtt > 1:565678/1‑150 (MQ=255)
aatTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCtt > 1:3337018/1‑150 (MQ=255)
ttAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTgcagc > 2:802351/1‑150 (MQ=255)
tAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTgcagca > 2:4538907/1‑150 (MQ=255)
tAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTgcagca > 2:4538368/1‑150 (MQ=255)
cacCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGtt < 2:2443242/150‑1 (MQ=255)
cccGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGtttt < 1:1430082/150‑1 (MQ=255)
gcgcACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAg < 1:1570082/150‑1 (MQ=255)
gcACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGAc < 2:3385895/150‑1 (MQ=255)
acaTTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGAcgc > 2:415691/1‑150 (MQ=255)
caTTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGAcgcc < 1:3903417/150‑1 (MQ=255)
caTTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGAcgcc < 1:3441992/150‑1 (MQ=255)
caTTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGAcgcc > 1:4747089/1‑150 (MQ=255)
aTTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGAcgccg > 1:648507/1‑150 (MQ=255)
aTTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGAcgccg > 2:4565011/1‑150 (MQ=255)
cATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGaa < 2:1856962/150‑1 (MQ=255)
atatGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAAc < 2:2529202/150‑1 (MQ=255)
tatGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACa < 2:30560/150‑1 (MQ=255)
tatGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACa > 2:1770918/1‑150 (MQ=255)
tgCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATa < 2:3830152/150‑1 (MQ=255)
gCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATAc < 1:3531304/150‑1 (MQ=255)
cGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACg < 1:4700203/150‑1 (MQ=255)
cGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACg < 1:3868688/150‑1 (MQ=255)
cGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACg < 1:4111573/150‑1 (MQ=255)
gTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGcc > 1:890795/1‑150 (MQ=255)
tCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCa > 2:3950256/1‑150 (MQ=255)
tCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCa < 2:2439643/150‑1 (MQ=255)
aGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACt > 1:829220/1‑150 (MQ=255)
aGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACt > 1:2544341/1‑150 (MQ=255)
cgcCCCGTTCTGTTGCGGCCAGTCAGAAAAGTCCATCGCCAACCCCAGCCGCGCACTATTAAGCTCATCATAAGGAAGCGTCTGGGTTTGTTCGTCTTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGTAACAGATACGCCACTCg < 1:4018348/150‑1 (MQ=255)
ccccGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCa > 1:3040225/1‑150 (MQ=255)
cGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAAtt < 1:4390394/150‑1 (MQ=255)
cGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAAtt > 2:2958477/1‑150 (MQ=255)
tCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGtt > 1:1092597/1‑150 (MQ=255)
cGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATc > 2:3647008/1‑150 (MQ=255)
ccAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGtt < 2:3570199/150‑1 (MQ=255)
ccAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGtt < 2:4470008/150‑1 (MQ=255)
cAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGttt < 1:4546287/150‑1 (MQ=255)
cAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTCCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGttt < 1:2913705/150‑1 (MQ=255)
gTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCTTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGttttg < 2:479430/150‑2 (MQ=255)
gTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTc > 2:1243742/1‑150 (MQ=255)
gTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCATAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTc < 2:4353858/150‑1 (MQ=255)
tCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCa > 2:1103329/1‑150 (MQ=255)
cAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAg < 1:4327095/150‑1 (MQ=255)
cAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGaaa > 2:466635/1‑150 (MQ=255)
aaaGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAg < 1:1282321/150‑1 (MQ=255)
aaaGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAg < 2:4439889/150‑1 (MQ=255)
aaGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGc < 2:274981/150‑1 (MQ=255)
cgTCCATCGCCCACGCCAGCCGCGCACGAGTAAGCTCAGCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGACCAGATACGCCACTCGCAATTGGTCAGCATCGTTTTCAGAAAGCa > 2:3499568/2‑150 (MQ=255)
gTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAg < 1:41863/150‑1 (MQ=255)
ccATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGAt > 2:3225853/1‑150 (MQ=255)
ccATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGAt < 2:4280401/150‑1 (MQ=255)
cATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATg < 2:2251517/150‑1 (MQ=255)
cGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAg > 2:139772/1‑150 (MQ=255)
ccACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTc < 2:2128230/150‑1 (MQ=255)
ccACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTc < 2:565678/150‑1 (MQ=255)
cACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCg < 2:3199497/150‑1 (MQ=255)
cAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAAt < 1:715384/150‑1 (MQ=255)
aGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATg < 2:692930/150‑1 (MQ=255)
gCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATgg < 2:3546502/150‑1 (MQ=255)
ccGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGgc < 1:2759850/150‑1 (MQ=255)
ccGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGgc < 1:258103/150‑1 (MQ=255)
ccGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGgc < 1:800541/150‑1 (MQ=255)
cgcACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCt < 2:2352642/150‑1 (MQ=255)
gcACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTg < 2:2885001/150‑1 (MQ=255)
aTTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGt > 1:3751179/1‑150 (MQ=255)
tAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTg > 1:1536117/1‑150 (MQ=255)
tAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTg > 2:887860/1‑150 (MQ=255)
tAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTg < 1:1479449/150‑1 (MQ=255)
cTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAg > 2:1713138/1‑150 (MQ=255)
atcaGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTaa < 1:2053800/150‑1 (MQ=255)
atcaGAAGGAAGCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTaa < 1:2692028/150‑1 (MQ=255)
tcaGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTaaa < 1:201559/150‑1 (MQ=255)
aGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAaga > 2:2855777/1‑150 (MQ=255)
aGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAaga > 1:3653329/1‑150 (MQ=255)
aGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAaga > 1:318523/1‑150 (MQ=255)
gaaggaagCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAagag < 1:2451491/150‑1 (MQ=255)
aaggaagCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAgc < 1:1940139/150‑1 (MQ=255)
ggaagCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAgcgc < 2:2997645/150‑1 (MQ=255)
aagCGTCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGa > 1:756125/1‑150 (MQ=255)
agCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGAt < 1:1346856/150‑1 (MQ=255)
agCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGAt > 2:1195024/1‑150 (MQ=255)
agCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGAt < 2:266119/150‑1 (MQ=255)
tCTGGGTTTGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCa < 2:3740176/150‑1 (MQ=255)
ggTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGa > 1:2780879/1‑150 (MQ=255)
tGTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGt < 2:3337018/150‑1 (MQ=255)
gTTCGTCGTTAATTCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGtt > 1:4420129/1‑150 (MQ=255)
gTTCGTCGTAAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGtt > 2:1074077/1‑150 (MQ=255)
ttCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTc > 1:1655421/1‑150 (MQ=255)
cgtcgtTAATGCTTTTCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGAAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTcgc < 2:2556360/150‑1 (MQ=255)
cgtcgtTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTcgc > 1:3148340/1‑150 (MQ=255)
cgtcgtTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTcgc > 1:1834503/1‑150 (MQ=255)
gtcgtTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTcgcg < 2:829220/150‑1 (MQ=255)
cgtTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAATAGCGCGATTGCAGCGACGGTTCTCGTc > 1:2845375/1‑150 (MQ=255)
cgtTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTc > 2:761019/1‑150 (MQ=255)
gtTAATGCTTTGCAGCAGTTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTcc < 1:2948573/150‑1 (MQ=255)
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GCCAATCAATTCATTAAACACCCGGCGCACATTGGTCATATGTGCGGTCAGCGCCCCGGTCAGTTGCGGCCAGTCAGCAAAGTCCATCGCCCACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCG > CP009273/3191690‑3191987
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
