Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F527 I0 R1 1651 322.4 10661268 95.2% 10149527 150.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,427,265 C→A 25.3% P47P (CCG→CCT)  accD ← acetyl‑CoA carboxylase, beta (carboxyltransferase) subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,427,2650CA25.3% 681.4 / 175.3 299P47P (CCG→CCT) accDacetyl‑CoA carboxylase, beta (carboxyltransferase) subunit
Reads supporting (aligned to +/- strand):  ref base C (117/106);  new base A (40/36);  total (157/142)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 301 total aligned reads displayed.

GATGCCAGACGGTCTTTATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAGCTCATTAGGGAC  >  CP009273/2427116‑2427412
                                                                                                                                                     |                                                                                                                                                   
gATGCCAGACGGTCTTTATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTc                                                                                                                                                     >  2:398105/1‑150 (MQ=255)
  tGCCAGACGGTCTTTATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCgg                                                                                                                                                   <  1:3774608/150‑1 (MQ=255)
          ggTCTTTATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCt                                                                                                                                           <  2:558898/150‑1 (MQ=255)
           gTCTTTATACTTCTTGGAGTCTCGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTc                                                                                                                                          <  1:593081/150‑1 (MQ=255)
            tCTTTATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCa                                                                                                                                         >  2:827747/1‑150 (MQ=255)
             cTTTATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCaa                                                                                                                                        >  1:4651541/1‑150 (MQ=255)
              tttATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAg                                                                                                                                       <  1:3728034/150‑1 (MQ=255)
               ttATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGa                                                                                                                                      >  2:617657/1‑150 (MQ=255)
               ttATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGa                                                                                                                                      >  1:1890575/1‑150 (MQ=255)
                tataCTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGAt                                                                                                                                     >  1:2384887/1‑150 (MQ=255)
                 ataCTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGAtt                                                                                                                                    >  1:273409/1‑150 (MQ=255)
                   aCTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTAc                                                                                                                                  >  2:2687954/1‑150 (MQ=255)
                        ttGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTTTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTcc                                                                                                                             <  2:586539/150‑1 (MQ=255)
                         tGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCa                                                                                                                            >  2:2561999/1‑150 (MQ=255)
                           gAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGc                                                                                                                          >  1:725717/1‑150 (MQ=255)
                             gTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTc                                                                                                                        >  1:4419783/1‑150 (MQ=255)
                             gTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTc                                                                                                                        <  2:2945229/150‑1 (MQ=255)
                             gTCACGAAACTACAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTc                                                                                                                        >  1:4837023/1‑150 (MQ=255)
                               cACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAg                                                                                                                      >  1:2045097/1‑150 (MQ=255)
                                aCGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTTACAGGCTATGCTGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAgc                                                                                                                     <  2:2989689/150‑1 (MQ=255)
                                     aCTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGt                                                                                                                <  1:4496691/150‑1 (MQ=255)
                                     aCTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGt                                                                                                                <  1:2989956/150‑1 (MQ=255)
                                          aGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATaaa                                                                                                           >  1:1095094/1‑150 (MQ=255)
                                            cacaTCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAAc                                                                                                         <  2:3528460/150‑1 (MQ=255)
                                             acaTCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAAcc                                                                                                        >  2:727546/1‑150 (MQ=255)
                                              caTCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCt                                                                                                       <  2:2249355/150‑1 (MQ=255)
                                              caTCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCt                                                                                                       <  1:1512380/150‑1 (MQ=255)
                                               aTCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTg                                                                                                      >  1:3551181/1‑150 (MQ=255)
                                               aTCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTg                                                                                                      >  1:1680042/1‑150 (MQ=255)
                                                tCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGa                                                                                                     <  2:5073282/150‑1 (MQ=255)
                                                 cTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGAc                                                                                                    >  1:1837955/1‑150 (MQ=255)
                                                   ttCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCg                                                                                                  >  2:5236948/1‑150 (MQ=255)
                                                      ggCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAg                                                                                               >  2:185362/1‑150 (MQ=255)
                                                         tCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTa                                                                                            <  1:2478030/150‑1 (MQ=255)
                                                          cAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTAt                                                                                           <  2:4159733/150‑1 (MQ=255)
                                                          cAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTAt                                                                                           >  1:3809038/1‑150 (MQ=255)
                                                           aaGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATc                                                                                          <  2:537023/150‑1 (MQ=255)
                                                           aaGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATc                                                                                          <  2:1733467/150‑1 (MQ=255)
                                                           aaGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATc                                                                                          <  2:4391462/150‑1 (MQ=255)
                                                           aaGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATc                                                                                          <  1:1107006/150‑1 (MQ=255)
                                                            aGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATca                                                                                         >  1:4235280/1‑150 (MQ=255)
                                                              cTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATcaca                                                                                       >  1:671889/1‑150 (MQ=255)
                                                                cGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACt                                                                                     <  1:816407/150‑1 (MQ=255)
                                                                   tACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAg                                                                                  >  2:4227837/1‑150 (MQ=255)
                                                                   tACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAg                                                                                  >  1:3349229/1‑150 (MQ=255)
                                                                    aCCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAAACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGt                                                                                 <  2:3293744/150‑1 (MQ=255)
                                                                      ccAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTcc                                                                               >  2:2103476/1‑150 (MQ=255)
                                                                      ccAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTcc                                                                               <  1:2170812/150‑1 (MQ=255)
                                                                       cAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCca                                                                              <  2:3150779/150‑1 (MQ=255)
                                                                       cAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCca                                                                              >  2:2407985/1‑150 (MQ=255)
                                                                        aGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCcac                                                                             <  1:2113331/150‑1 (MQ=255)
                                                                        aGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCcac                                                                             >  2:1296407/1‑150 (MQ=255)
                                                                         gCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCcaca                                                                            <  1:1446778/150‑1 (MQ=255)
                                                                         gCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCcaca                                                                            <  1:263888/150‑1 (MQ=255)
                                                                          cTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCacac                                                                           >  1:2579484/1‑150 (MQ=255)
                                                                           tCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACAcc                                                                          >  2:87841/1‑150 (MQ=255)
                                                                                 aGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCa                                                                    >  2:3609820/1‑150 (MQ=255)
                                                                                 aGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCa                                                                    <  2:2778158/150‑1 (MQ=255)
                                                                                  ggCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAg                                                                   >  2:394242/1‑150 (MQ=255)
                                                                                   gCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAgg                                                                  >  1:2453037/1‑150 (MQ=255)
                                                                                   gCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAgg                                                                  <  2:2594872/150‑1 (MQ=255)
                                                                                      tccttcATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAAt                                                               <  1:1352514/150‑1 (MQ=255)
                                                                                       ccttcATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCTAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATg                                                              <  1:4891354/150‑1 (MQ=255)
                                                                                        cttcATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGc                                                             >  1:2790992/1‑150 (MQ=255)
                                                                                          tcATCTAACATGATATTCAGGCTATTACGAGCTTTCATACGCATGTGATGTTAACACTTCTGACAGACATCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTc                                                           <  2:154532/150‑1 (MQ=255)
                                                                                          tcATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTc                                                           <  1:955075/150‑1 (MQ=255)
                                                                                           cATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCg                                                          >  2:4289736/1‑150 (MQ=255)
                                                                                           cATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCg                                                          >  1:316574/1‑150 (MQ=255)
                                                                                               tAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCtt                                                      >  1:4303729/1‑150 (MQ=255)
                                                                                               tAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCtt                                                      <  1:3084930/150‑1 (MQ=255)
                                                                                                aaCAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTg                                                     >  2:2746509/1‑150 (MQ=255)
                                                                                                aaCAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCAGACAGACCTCAAGATTACGGTCCAGCTCAGCGCGGTATAATACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTg                                                     <  2:2193151/150‑1 (MQ=255)
                                                                                                  cAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCg                                                   >  1:5164729/1‑150 (MQ=255)
                                                                                                       tATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTgg                                              >  1:4960137/1‑150 (MQ=255)
                                                                                                       tATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTgg                                              >  2:2451196/1‑150 (MQ=255)
                                                                                                             ggCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTaa                                        >  1:1206332/1‑150 (MQ=255)
                                                                                                              gCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAAt                                       <  1:3963034/150‑1 (MQ=255)
                                                                                                              gCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAAt                                       <  2:119527/150‑1 (MQ=255)
                                                                                                               cGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATg                                      <  1:532828/150‑1 (MQ=255)
                                                                                                                gATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGt                                     >  2:3067235/1‑150 (MQ=255)
                                                                                                                gATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGt                                     >  2:4688590/1‑150 (MQ=255)
                                                                                                                gATTACGCGCTGTCATACGCATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGGTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGt                                     <  1:235452/150‑1 (MQ=255)
                                                                                                                  ttACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTg                                   <  1:384925/150‑1 (MQ=255)
                                                                                                                       cgcTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCtttt                              <  1:244061/150‑1 (MQ=255)
                                                                                                                       cgcTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGAtttt                              >  1:2726034/1‑150 (MQ=255)
                                                                                                                             cATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCg                        >  2:453370/1‑150 (MQ=255)
                                                                                                                              aTACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGt                       >  2:112225/1‑150 (MQ=255)
                                                                                                                              aTACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGt                       >  2:4894208/1‑150 (MQ=255)
                                                                                                                              aTACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCATTCGGGTGGGAGTAATGTTGCTTTTAATTctt                       >  1:1148209/1‑148 (MQ=255)
                                                                                                                                 cGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCa                    <  1:2653659/150‑1 (MQ=255)
                                                                                                                                   cATGTGATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAAt                  <  1:3354404/150‑1 (MQ=255)
                                                                                                                                     tgtgATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATcc                <  1:3029232/150‑1 (MQ=255)
                                                                                                                                     tgtgATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATcc                <  1:3408912/150‑1 (MQ=255)
                                                                                                                                       tgATGGTCACACTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAg              <  2:4110817/150‑1 (MQ=255)
                                                                                                                                         aTGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAGCt            <  2:1988135/150‑1 (MQ=255)
                                                                                                                                          tGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAGCTc           <  1:4712953/150‑1 (MQ=255)
                                                                                                                                             tCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAGCTCAtt        >  2:4796064/1‑150 (MQ=255)
                                                                                                                                               acacTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAGCTCATTAg      <  2:462759/150‑1 (MQ=255)
                                                                                                                                                cacTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAGCTCATTAgg     <  2:170111/150‑1 (MQ=255)
                                                                                                                                                cacTTAGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAGCTCATTAgg     >  2:3430365/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GATGCCAGACGGTCTTTATACTTCTTGGAGTCACGAAACTTCAGCACATCTTTCGGCTCAAGCTCGCTACCCAGCTCCACAAGGCTTCCTTCATCTAACAGGCTATGCAGGCGATTACGCGCTGTCATACGCATGTGATGGTCACACTTCGGACAGACCTCAAGATTACGTTCCAGCTCAGCGCGGTATAAAACCTGACCGCAGCTATCACACTTAGTCCACACCCCTTCAGGAATGCTCGCCTTGCGGGTGGGAGTAATGTTGCTTTTAATTCGTTCAATCCAGCTCATTAGGGAC  >  CP009273/2427116‑2427412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A