BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	68659 =	131 (0.690)	11 (0.070)	11/260	12.4	8.7%	coding (775/852 nt)	USA300HOU_0065	transposase
*	?	CP000730	= 68655	115 (0.690)	11 (0.070)	11/260	12.4	8.7%	coding (771/852 nt)	USA300HOU_0065	transposase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 142 total aligned reads displayed.

AAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGATTATAGGCTCTTTTGT  >  CP000730/68508‑68802

aaGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAAAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACTTCAATTTTGGGCTTAATCACTCTAACCACCTTGTAATAGATATTGTCGAAAAGTACATTAAAAACa                                                                                                                                                       <  1:58538/149‑1 (MQ=14)

aaGCATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACa                                                                                                                                                       <  2:435216/149‑1 (MQ=255)

aaGCATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTGTTTACATCAATCATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACa                                                                                                                                                       <  2:536365/149‑1 (MQ=255)

  gTATGTCCCGAAAGGGAACACCTGGCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACaat                                                                                                                                                     <  2:1252166/149‑1 (MQ=255)

     tGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATAAGGTCGAAAAGTACATTAAAAACaataaa                                                                                                                                                  >  2:1818293/1‑148 (MQ=255)

     agTCCCGAAAGGGAACACATGCCGATAACGCCAAGATAAAAAATTACCATTCCTAAATAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTAAAAAAAAAAAAAAAAAACaataat                                                                                                                                                  <  2:458083/148‑1 (MQ=11)

      gTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAGAAGTACATTAAAAACaataata                                                                                                                                                 <  2:1881577/149‑1 (MQ=255)

       tCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACaataataa                                                                                                                                                <  2:657325/149‑1 (MQ=255)

                  aaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACaataataataataataata                                                                                                                                     >  2:641608/1‑149 (MQ=255)

                  aaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACaataataataataataaaa                                                                                                                                     >  2:793832/1‑147 (MQ=255)

                  aaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATAGTCGAAAAGTACATCAAAAACaataataataataataaaa                                                                                                                                     >  2:1402522/1‑147 (MQ=255)

                   acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACaataataataataataataa                                                                                                                                    <  1:1282132/149‑1 (MQ=255)

                    ccccTGCCGATAGCGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACaataataataataataataat                                                                                                                                   <  2:1587505/147‑1 (MQ=255)

                    cacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAAGAGATATTGTCGAAAAGTACATTAAAAACaataataataataataataat                                                                                                                                   <  1:389717/149‑1 (MQ=255)

                      ccTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCg                                                                                                                                 >  1:150375/1‑149 (MQ=255)

                            gATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTca                                                                                                                           <  1:1144110/149‑1 (MQ=255)

                              tAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTcaac                                                                                                                         >  2:235023/1‑149 (MQ=255)

                                   ccccGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACaaaa‑a                                                                                                                   <  2:1351979/149‑1 (MQ=255)

                                   ccccGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACaaaa‑a                                                                                                                   <  1:1744673/149‑1 (MQ=255)

                                   ccccGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAAC‑‑‑AATAATAATAATAATAATGGAATTCAACAAAA‑ACTa                                                                                                                >  1:926963/1‑149 (MQ=255)

                                     ccGATGGAAAGTTTCCATTCCGCGCTAAAGTCTGAAACGTTTTAAATAAATAATGAGCTTAATCACTCTAAGCACATGGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACt                                                                                                                 <  2:384963/149‑1 (MQ=18)

                                       gATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAg                                                                                                               <  1:1982987/149‑1 (MQ=255)

                                        aTAGAAAGTTTCCATTCGTCGCTAAAGTCTGCCAGTTAGGACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAgg                                                                                                              >  1:1470567/1‑149 (MQ=21)

                                        aTAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAgg                                                                                                              <  2:264094/149‑1 (MQ=255)

                                        aTAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAAC‑‑‑AATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTa                                                                                                           <  1:772652/149‑1 (MQ=255)

                                             aaggtgccATTCCTCGGTAAAGTCTGAAACTTTTGACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATACTCGAATTCAACAAAA‑ACTAGGCTACt                                                                                                         <  2:672392/143‑1 (MQ=21)

                                                  tacATTCCTCGTTAAAGTCTGAAACTTTTTACATCAATAATGCGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAAC‑‑‑AATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCt                                                                                                 <  1:882933/147‑1 (MQ=17)

                                                     atcccTCACTAAAGTCTGAAACTTTCTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCt                                                                                                 <  2:1276857/146‑1 (MQ=255)

                                                      ttCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTg                                                                                                <  1:1740691/149‑1 (MQ=255)

                                                       tCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACAGTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGt                                                                                               >  2:1476289/1‑149 (MQ=255)

                                                            gCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCACCTGTacact                                                                                          <  2:1781686/149‑5 (MQ=255)

                                                             cTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATATTAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATa                                                                                         <  1:1374495/149‑1 (MQ=255)

                                                             cTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATa                                                                                         <  1:36146/149‑1 (MQ=255)

                                                             cTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATa                                                                                         <  1:30391/149‑1 (MQ=255)

                                                             cTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCAAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATa                                                                                         <  2:1861510/149‑1 (MQ=255)

                                                             cTAAAGTCCGAAACTTTTTACATCAATCATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCCACACAA‑ACTCGGCTACTTATCCCCTGTAAAATa                                                                                         <  1:1000309/149‑1 (MQ=21)

                                                               aaaGTCCGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACa                                                                                       <  1:423984/149‑1 (MQ=255)

                                                                 aGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACaga                                                                                     >  1:832419/1‑149 (MQ=255)

                                                                 aGTCTGAAACTTTTTACATCAATAATAAGCTTAAACACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAAAAAAAAAAAAAAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACaga                                                                                     <  2:1129352/149‑1 (MQ=21)

                                                                 aGTCTGAAACTTGTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACaga                                                                                     <  2:27472/149‑1 (MQ=255)

                                                                    cTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGaa                                                                                  <  2:1462238/149‑1 (MQ=255)

                                                                       aaaCTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTa                                                                               >  1:583831/1‑149 (MQ=255)

                                                                          cTTTTTACATCAATAATGAGCTTAATCACTCGAATCACATTGTAATACTTAGTTTCGATAAGTACAGTAAAAAC‑‑‑AATAATAATAATAATAATCGAACTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGcc                                                                         <  2:209495/149‑1 (MQ=18)

                                                                             tttACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGcc                                                                         >  2:1350817/1‑149 (MQ=255)

                                                                                 cATCAATAATGAGCTTAATCACTCTAATCCCATTTTAATTGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGa                                                                     <  1:1352073/149‑1 (MQ=255)

                                                                                 cATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGa                                                                     <  1:854265/149‑1 (MQ=255)

                                                                                      ataatGAGCTTAATCACACTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAAC‑‑‑AATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGg‑tg                                                            <  2:1769209/149‑1 (MQ=255)

                                                                                         atGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAACAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGCCTACTTATCCCCTGTAAAATCCCGAGCATTAATACCCTAAAACCTgatt                                                             >  2:1757869/1‑146 (MQ=25)

                                                                                         atGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGACCATGg‑tg                                                            >  2:1216693/1‑149 (MQ=255)

                                                                                          tGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTCCTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATAg‑tgt                                                           >  2:1883978/1‑149 (MQ=255)

                                                                                           gAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGtt                                                          <  1:1725787/149‑1 (MQ=255)

                                                                                            aGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGttt                                                         >  1:1153203/1‑149 (MQ=255)

                                                                                             gCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGttt‑t                                                       <  1:1056505/149‑1 (MQ=255)

                                                                                              cTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGttt‑tt                                                      <  1:1068246/149‑1 (MQ=255)

                                                                                              cTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATT‑ATCAAAAGACAGTGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGttt‑tt                                                      >  1:1455589/1‑149 (MQ=25)

                                                                                               ttAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAATA‑ACTAGGCTACTTATCCCCTGTAAATTACAGAGCATTAATAGCCTAGAACATGG‑TGTTT‑tta                                                     <  1:1296242/149‑1 (MQ=255)

                                                                                               ttAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑tta                                                     <  1:235023/149‑1 (MQ=255)

                                                                                                  aTCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGGACATGG‑TGTTT‑ttatta                                                  <  1:1467082/149‑1 (MQ=255)

                                                                                                  aTCACTATAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑ttatta                                                  <  1:482898/149‑1 (MQ=255)

                                                                                                      ctcaAAGCAAATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGtt                                              <  2:125677/149‑1 (MQ=255)

                                                                                                          aaTCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAAC‑‑‑AATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGttt                                       <  1:418809/149‑1 (MQ=255)

                                                                                                            tCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGtt                                        <  2:85498/149‑1 (MQ=255)

                                                                                                            tCACATTGTAATAGATAGTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGtt                                        <  1:226547/149‑1 (MQ=255)

                                                                                                             cacaTTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAATAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGttt                                       <  1:465608/149‑1 (MQ=255)

                                                                                                               caTTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTa                                     <  1:1953458/149‑1 (MQ=255)

                                                                                                                      aTAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTc                              <  1:930343/149‑1 (MQ=255)

                                                                                                                         gATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGt                           <  1:544378/149‑1 (MQ=255)

                                                                                                                          atatTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTg                          >  1:510517/1‑149 (MQ=255)

                                                                                                                          atatTGTCGAAAAGTACATTAAAAAC‑‑‑AATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGccc                       >  1:1765233/1‑149 (MQ=255)

                                                                                                                           tatTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGc                         <  2:122919/149‑1 (MQ=255)

                                                                                                                            attgctgAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAAAAACA‑ACTAGGCTACTTTTCCTGTGTTAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGcc                        <  2:217435/143‑1 (MQ=18)

                                                                                                                            atTGTCGAAAAGTACATTAAAAACAATAATAATAATACTAATAATCGAATTCAACAAAA‑ACTATGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGcc                        <  1:384359/149‑1 (MQ=255)

                                                                                                                            atTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGcc                        <  2:10668/149‑1 (MQ=255)

                                                                                                                            atTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGcc                        <  1:670834/149‑1 (MQ=255)

                                                                                                                            atTGTCGAAAAGTAAATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGcc                        <  2:995227/149‑1 (MQ=255)

                                                                                                                              tGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTCCTTATCCCCTGTAAAATACAGAGAATTAAGAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTACAGTTTTAAGGGTTCACGGCCCt                      >  1:535912/1‑149 (MQ=18)

                                                                                                                              tGTCGAAAAGTACATTAAAAAC‑‑‑AATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAAAACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTGTTAAGTTCACGTTTTAAGGGTTCAGTGCCCGAgg                   >  1:568852/1‑149 (MQ=17)

                                                                                                                                tCGAAAAGTACATTAAAGACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAg                    >  2:1682240/1‑149 (MQ=255)

                                                                                                                                tCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAg                    >  2:1437782/1‑149 (MQ=255)

                                                                                                                                tCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAg                    >  1:150694/1‑149 (MQ=255)

                                                                                                                                tCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACCTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAg                    <  2:1604027/149‑1 (MQ=255)

                                                                                                                                 cGAAAAGTACATTAAAAACAATAATAATCATCATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGGGCCCTAgg                   >  2:919830/1‑149 (MQ=255)

                                                                                                                                 cGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAgg                   <  1:119619/149‑1 (MQ=255)

                                                                                                                                 cGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAgg                   <  1:598568/149‑1 (MQ=255)

                                                                                                                                 cGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCACTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTACCCAAgg                   >  2:406729/1‑149 (MQ=255)

                                                                                                                                 cGAAAAGTACATTAAAAAC‑‑‑AATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGAtt                >  1:167193/1‑149 (MQ=255)

                                                                                                                                 agAAAAGTACATTAAAAACAATAATAATACTAATAATAATCAAATTCAACAAAA‑CCTAGGCTACTTATCCCCTGTAAAATACAGAGAATTCATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAgg                   <  2:1541127/148‑1 (MQ=255)

                                                                                                                                  gAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGCGCATTTATAGCTTACA‑‑ATGGTTATTTGTTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGa                  <  1:1977582/149‑1 (MQ=21)

                                                                                                                                   aaaaTTACAACAAAAACGATAATAATAATAAGAATAATCGAATTCGACAAAA‑ACGAGCCTACTTACCCCCTGTAAAATACAGAGAATTAATATCTTAGAACATGG‑TGTTT‑TTATCAAGTTCCCGTTTTAAGGGTTCAGTGCCCTATGAt                 <  2:1629816/149‑1 (MQ=17)

                                                                                                                                   aaaaGTACATTAAAAACAATAATAATAATAATAATAATCGCATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGAt                 >  2:395450/1‑149 (MQ=255)

                                                                                                                                   aaaaGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGAt                 >  2:166504/1‑149 (MQ=255)

                                                                                                                                   aaaaGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAAAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGTAt                 >  2:1497952/1‑149 (MQ=255)

                                                                                                                                    aaaGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGAtt                >  2:364443/1‑149 (MQ=255)

                                                                                                                                    aaaGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGAtt                >  1:1740540/1‑149 (MQ=255)

                                                                                                                                     aaGGACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGATta               <  1:263680/149‑1 (MQ=255)

                                                                                                                                        tACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGATTATAg            >  1:1718537/1‑149 (MQ=255)

                                                                                                                                         aCATTAAAAACAATAATAATAATAATAATAATCTAATTCAACATTC‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGATTATAgg           <  1:1402522/149‑1 (MQ=255)

                                                                                                                                         aCATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGATTATAgg           <  1:641608/149‑1 (MQ=255)

                                                                                                                                                aaaCAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGATTATAGGCTCtttt    <  1:1350817/149‑1 (MQ=255)

                                                                                                                                                  aCAATAAAAATAAGAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGATTATAGGCTCTTTTGt  <  2:1539579/149‑1 (MQ=255)

AAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATATTGTCGAAAAGTACATTAAAAACAATAATAATAATAATAATAATCGAATTCAACAAAA‑ACTAGGCTACTTATCCCCTGTAAAATACAGAGAATTAATAGCCTAGAACATGG‑TGTTT‑TTATTAAGTTCCCGTTTTAAGGGTTCAGTGCCCTAGGATTATAGGCTCTTTTGT  >  CP000730/68508‑68802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.