| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4289016 = | 142 (1.200) | 3 (0.030) | 3/282 | 12.9 | 2.2% | coding (1253/1437 nt) | nrfA | nitrite reductase, formate‑dependent, cytochrome |
| ? | NC_000913 | 4289092 = | 138 (1.240) | coding (1329/1437 nt) | nrfA | nitrite reductase, formate‑dependent, cytochrome | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
TTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4289218‑4289016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaggcCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGG > NC_000913/4289092‑4289290 TTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCA > 1:868293/1‑200 AACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCAGGCCATTGGCC < 1:289666/200‑1 ACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCAGGCCATTGGCCTGAACATGGAACAAATCA < 1:435747/200‑1 GTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCA > 4:542354/1‑150 TCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGCTTTCATGGGTGATGCCTTTGGTCGCCAGCAGG > 4:339654/1‑150 TCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCAGG < 4:381716/150‑1 TCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCC > 2:769811/1‑141 GGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCA > 3:86299/1‑132 gagCACCGTTTGGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATGTCATGGGTGATGCCTTTGGTCGCCAG < 3:73889/129‑1 CCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCAGGC > 3:483719/1‑132 TCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGC < 2:372965/141‑1 CAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCG < 1:651991/200‑1 AGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGG < 4:901746/150‑1 AGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGG < 4:895618/150‑1 GGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGA > 4:736126/1‑150 GCCAGTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAG < 4:773871/150‑1 CCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAGACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACA > 2:90699/1‑141 CCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGG > 1:257212/1‑200 TTGCGAGGCGGAACGGGGTTATTGGCTTAACAGACCGTTTTTACGTGCCTGTTCTTCCCACTGCGGGATCACCGTTTTGATGAAGTCCTGCTTCTCGGCCTTGATTTGTTCCATGTTCAGGCCAATGGCCTGCTGGGCTTTCTCTTTGGTTGAGATATCCGGGATCTGGATTTCATGGGTGATGCCTTTGGTCGCCAGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4289218‑4289016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaggcCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGG > NC_000913/4289092‑4289290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |