New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4289016 =142 (1.200)3 (0.030) 3/282 12.9 2.2% coding (1253/1437 nt) nrfA nitrite reductase, formate‑dependent, cytochrome
?NC_000913 4289092 = 138 (1.240)coding (1329/1437 nt) nrfA nitrite reductase, formate‑dependent, cytochrome
Rejected: Position hash score below cutoff.

Only 100 of 146 total aligned reads displayed.

CAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGG  >  NC_000913/4288895‑4289290
                                                                                                                                                                                                      |                                                                                                                                                                                                      
cAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCAt                                                                                                                                                                                                      >  1:825375/1‑200 (MQ=255)
     gcgcTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                                                                                                                 >  1:53095/1‑200 (MQ=255)
     gcgcTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                                                                                                                 <  1:479707/200‑1 (MQ=255)
               cTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGa                                                                                                                                                                                       <  1:779897/200‑1 (MQ=255)
                           tCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGc                                                                                                                                                                           <  1:631636/200‑1 (MQ=255)
                           tCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGc                                                                                                                                                                           >  1:338147/1‑200 (MQ=255)
                                        atatGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGAc                                                                                                                                                              <  1:3419/200‑1 (MQ=255)
                                                   ccGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCAtt                                                                                                                                                                                                     >  4:463347/1‑150 (MQ=255)
                                                     ggAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACgg                                                                                                                                                 <  1:204581/200‑1 (MQ=255)
                                                           agGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACtt                                                                                                                                                            >  1:711060/1‑183 (MQ=255)
                                                            ggggtACGGATGTTCGGTACGTATGTGGGTAAAGCGG‑CGGATGCATGCACCAAACTGGCGCTCGTGCTGGCGACCAAAGGCAACACCCATGAAATCCAGATCCCTGATATCTCAACCAAAGAGAAAGCCCAGTAGGCCATTGGCCTGAAc                                                                                                                                                                                            <  4:511144/146‑1 (MQ=255)
                                                            ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCAtt                                                                                                                                                                                                     >  2:370312/1‑141 (MQ=255)
                                                            ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                            <  4:283521/150‑1 (MQ=255)
                                                            ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                            >  4:767709/1‑150 (MQ=255)
                                                            ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATccc                                                                                                                                          >  1:297605/1‑200 (MQ=255)
                                                             gTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTg                                                                                                                                                                                                    >  2:845204/1‑141 (MQ=255)
                                                                  cGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGcc                                                                                                                                                                                                        <  3:613243/132‑1 (MQ=255)
                                                                  cGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGaa                                                                                                                                                                                      >  4:491054/1‑150 (MQ=255)
                                                                       gCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGgaag                                                                                                                               >  1:184941/1‑200 (MQ=255)
                                                                        cTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATc                                                                                                                                                                                <  4:388232/150‑1 (MQ=255)
                                                                         tCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                                                                                                                 <  3:496885/132‑1 (MQ=255)
                                                                         tCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                                                                                                                 <  3:306701/132‑1 (MQ=255)
                                                                          cgggtagggcaagggtAAAACGGCCGGATGAACGCACCAACCTGGGCGGCCTGCTGGCGACAAAGGGAACCCCCCATGAATTCCAGTTCCCGATAATCTCAACC‑AAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                            <  1:915149/185‑1 (MQ=255)
                                                                          cGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGa                                                                                                                                                                                       <  2:115470/141‑1 (MQ=255)
                                                                          cGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                            <  1:579138/200‑1 (MQ=255)
                                                                          cGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                            <  1:167404/200‑1 (MQ=255)
                                                                          cGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                            >  1:868133/1‑200 (MQ=255)
                                                                            gTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAgg                                                                                                                                                                            >  4:353596/1‑150 (MQ=255)
                                                                            gTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAg                                                                                                                          >  1:784763/1‑200 (MQ=255)
                                                                             tACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAgg                                                                                                                         <  1:420075/200‑1 (MQ=255)
                                                                              aCGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                            <  3:633163/132‑1 (MQ=255)
                                                                              aCGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                            <  3:538009/132‑1 (MQ=255)
                                                                               cGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCa                                                                                                                       <  1:679804/200‑1 (MQ=255)
                                                                                 gCGATGGATAAAGCGG‑CGGACGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAACGGCACCACCCCTGAAATCCAGCTCCCGGATATCTCTACTAAAGAGAAAGCCCAGCAGCCCCTCGGCATGGACATg                                                                                                                                                                                         >  3:392818/1‑132 (MQ=255)
                                                                                   gATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGa                                                                                                                                                                                       <  3:894410/132‑1 (MQ=255)
                                                                                     tGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAAc                                                                                                                                                                                     <  3:163133/132‑1 (MQ=255)
                                                                                      ggATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCTATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTaaaa                                                                                                                >  1:554875/1‑200 (MQ=255)
                                                                                      ggATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAAAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCa                                                                                                                                                                  >  4:316307/1‑150 (MQ=255)
                                                                                      ggATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCAGGAAATCCAGATCCCGGATATCACAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCCAGGCCGAGAAGCa                                                                                                                                                                  >  4:362245/1‑150 (MQ=255)
                                                                                        aTAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCATCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                                                                                                              <  1:917585/200‑1 (MQ=255)
                                                                                        aTAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                                                                                                              <  1:311932/200‑1 (MQ=255)
                                                                                          aaaGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATc                                                                                                                                                                                <  3:819363/132‑1 (MQ=255)
                                                                                            aGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACtt                                                                                                                                                            <  4:711000/150‑1 (MQ=255)
                                                                                               gg‑cggATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGc                                                                                                                                                                           <  3:575592/132‑1 (MQ=255)
                                                                                                      tGCACGCACCAAACTGGCGCGCCTCCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGcc                                                                                                 >  1:851375/1‑200 (MQ=255)
                                                                                                             acCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGAc                                                                                                                                                              <  3:217957/132‑1 (MQ=255)
                                                                                                              ccAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCaaaa                                                                                                                                                    >  2:775228/1‑141 (MQ=255)
                                                                                                                  ggccaatggcCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGtt                                                                                     >  1:289666/9‑200 (MQ=255)
                                                                                                                     ggCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCaa                                                                                                                                                      <  3:870926/132‑1 (MQ=255)
                                                                                                                          gcCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACgg                                                                                                                                                 <  3:483719/132‑1 (MQ=255)
                                                                                                                           ccTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGgaaga                                                                                                                              >  4:381716/1‑150 (MQ=255)
                                                                                                                             tgctgGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                            <  4:542354/150‑1 (MQ=255)
                                                                                                                             tgctgGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCaa                                                                          <  1:868293/200‑1 (MQ=255)
                                                                                                                               ctgGCGACCAAAGGCATCACCCATGACATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCCAAACGGTGCTc                                                                                                                                            >  3:73889/1‑132 (MQ=255)
                                                                                                                                      ccAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                            <  2:629268/141‑1 (MQ=255)
                                                                                                                                      ccAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                            <  2:397319/141‑1 (MQ=255)
                                                                                                                                      ccAAAGGCATCACCCAAAGAATCCAGATCCCGGATATCGCAACCAAAGAGAAAGCCCAACAGGCCATTGGCCTCAACATGGAACAAAACAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaa                                                                 <  1:213399/200‑1 (MQ=255)
                                                                                                                                       cAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaaa                                                                <  1:650767/200‑1 (MQ=255)
                                                                                                                                       cAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaaa                                                                <  1:849176/200‑1 (MQ=255)
                                                                                                                                           ggCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                                                                                                              <  4:726315/150‑1 (MQ=255)
                                                                                                                                              aTCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAAt                                                         <  1:381740/200‑1 (MQ=255)
                                                                                                                                              aTCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAAt                                                         <  1:509074/200‑1 (MQ=255)
                                                                                                                                                cACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATgg                                                       <  1:337235/200‑1 (MQ=255)
                                                                                                                                                  cccATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACCgg                                                                                                                         >  3:510375/1‑132 (MQ=255)
                                                                                                                                                  cccATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTaaaa                                                                                                                >  2:576659/1‑141 (MQ=255)
                                                                                                                                                    cATGAAAGCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCa                                                                                                                       <  3:391403/132‑1 (MQ=255)
                                                                                                                                                     aTGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGgaaga                                                                                                                              >  3:570827/1‑124 (MQ=255)
                                                                                                                                                     aTGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGgaaga                                                                                                                              <  2:570843/124‑1 (MQ=255)
                                                                                                                                                        aaaTCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGcc                                                                                                 <  4:858028/150‑1 (MQ=255)
                                                                                                                                                        aaaTCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAata                                               <  1:152474/200‑1 (MQ=255)
                                                                                                                                                          aTCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTaaa                                                                                                                 >  3:372602/1‑132 (MQ=255)
                                                                                                                                                          aTCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATg                                             <  1:247568/200‑1 (MQ=255)
                                                                                                                                                            ccAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAGACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAg                                           <  1:491102/200‑1 (MQ=255)
                                                                                                                                                            ccAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAg                                           <  1:39484/200‑1 (MQ=255)
                                                                                                                                                                aTCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                                                                                                              <  4:501148/129‑1 (MQ=255)
                                                                                                                                                                aTCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAAccc                                                                                         <  4:210330/150‑1 (MQ=255)
                                                                                                                                                                aTCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGACTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGc                                                                                                  <  2:776481/141‑1 (MQ=255)
                                                                                                                                                                 tCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTAt                                      <  1:716409/200‑1 (MQ=255)
                                                                                                                                                                    cGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCGATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAc                                   <  1:556169/200‑1 (MQ=255)
                                                                                                                                                                      gATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAAAAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTcc                                                                                   <  4:840120/150‑1 (MQ=255)
                                                                                                                                                                         atCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAAccc                                                                                         >  2:466842/1‑141 (MQ=255)
                                                                                                                                                                         atCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttcg                              >  1:838566/1‑200 (MQ=255)
                                                                                                                                                                          tctcAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGcc                                                                                                 <  3:879680/132‑1 (MQ=255)
                                                                                                                                                                          tctcAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGcc                                                                                                 <  3:344967/132‑1 (MQ=255)
                                                                                                                                                                          tctcAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCt                                                                               <  4:424171/150‑1 (MQ=255)
                                                                                                                                                                               aCCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCaa                                                                          >  4:58582/1‑150 (MQ=255)
                                                                                                                                                                               aCCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGttatta                        >  1:900718/1‑200 (MQ=255)
                                                                                                                                                                                ccAAGGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCg                                                                                  >  2:665061/1‑141 (MQ=255)
                                                                                                                                                                                ccAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCg                                                                                  >  2:665054/1‑141 (MQ=255)
                                                                                                                                                                                ccAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAg                                                                         >  4:149843/1‑150 (MQ=255)
                                                                                                                                                                                 cAAAAAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAAc                      <  1:316325/200‑1 (MQ=255)
                                                                                                                                                                                     gagaAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCg                                                                             >  2:170588/1‑141 (MQ=255)
                                                                                                                                                                                     gagaAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCg                                                                             >  2:499363/1‑141 (MQ=255)
                                                                                                                                                                                         aaGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCgggg              >  1:432214/1‑200 (MQ=255)
                                                                                                                                                                                           gCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTg            >  1:694775/1‑200 (MQ=255)
                                                                                                                                                                                                  agGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATgg                                                       <  4:895618/150‑1 (MQ=255)
                                                                                                                                                                                                  agGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATgg                                                       <  4:901746/150‑1 (MQ=255)
                                                                                                                                                                                                    gCCAGTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAg                                                     <  4:773871/150‑1 (MQ=255)
                                                                                                                                                                                                     ccATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAGACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAaca                                                             >  2:90699/1‑141 (MQ=255)
                                                                                                                                                                                                     ccATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCgg  >  1:257212/1‑200 (MQ=255)
                                                                                                                                                                                                      |                                                                                                                                                                                                      
CAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGG  >  NC_000913/4288895‑4289290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.