New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4289016 =142 (1.200)3 (0.030) 3/282 12.9 2.2% coding (1253/1437 nt) nrfA nitrite reductase, formate‑dependent, cytochrome
?NC_000913 4289092 = 138 (1.240)coding (1329/1437 nt) nrfA nitrite reductase, formate‑dependent, cytochrome
Rejected: Position hash score below cutoff.

Only 100 of 144 total aligned reads displayed.

CGCTGGATGCAGGCGCGACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTT  >  NC_000913/4288833‑4289207
                                                                                                                                                                                        |                                                                                                                                                                                               
cgcTGGATGCAGGCGCGACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCaaa                                                                                                                                                                                 >  1:424215/1‑200 (MQ=255)
   tGGATGCAGGCGCGACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGc                                                                                                                                                                              <  1:755734/200‑1 (MQ=255)
      aTGCAGGCGCGACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATc                                                                                                                                                                           >  1:427969/1‑200 (MQ=255)
               cgACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGaa                                                                                                                                                                  >  1:244377/1‑200 (MQ=255)
               cgACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGaa                                                                                                                                                                  >  1:604249/1‑200 (MQ=255)
                gACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGaaa                                                                                                                                                                 <  1:626195/200‑1 (MQ=255)
                gACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGaaa                                                                                                                                                                 <  1:625191/200‑1 (MQ=255)
                   ggAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATcc                                                                                                                                                              <  1:767861/200‑1 (MQ=255)
                   ggAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATcc                                                                                                                                                              <  1:74113/200‑1 (MQ=255)
                        cTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATc                                                                                                                                                         <  1:218189/200‑1 (MQ=255)
                                      aTTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAAc                                                                                                                                           >  1:168251/1‑200 (MQ=255)
                                      aTTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAAc                                                                                                                                           >  1:536383/1‑200 (MQ=255)
                                              cGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGAc                                                                                                                                                                                     >  4:779832/1‑150 (MQ=255)
                                               gATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCctg                                                                                                                                                                                             >  2:124179/1‑141 (MQ=255)
                                                 tatCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCctgct                                                                                                                                                                                           >  2:406750/1‑141 (MQ=255)
                                                    ccGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGc                                                                                                                                                                                        >  2:86306/1‑141 (MQ=255)
                                                    ccGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGccc                                                                                                                             >  1:339675/1‑200 (MQ=255)
                                                    ccGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCCCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGc                                                                                                                                                                                        >  2:762081/1‑141 (MQ=255)
                                                           gCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGTCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCCCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCTTGCTGGCGACCaac                                                                                                                                                                                 >  2:515761/1‑140 (MQ=255)
                                                           gCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCctgctg                                                                                                                                                                                          >  3:554725/1‑132 (MQ=255)
                                                           gCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCaaa                                                                                                                                                                                 >  2:98786/1‑141 (MQ=255)
                                                           gCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCaaa                                                                                                                                                                                 >  2:613259/1‑141 (MQ=255)
                                                           gCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCAcc                                                                                                                                                                        >  4:159397/1‑150 (MQ=255)
                                                           gCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCAcc                                                                                                                                                                        >  4:758995/1‑150 (MQ=255)
                                                              cAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCAt                                                                                                                                                                     >  4:509024/1‑150 (MQ=255)
                                                              cAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCAt                                                                                                                   >  1:825375/1‑200 (MQ=255)
                                                                gTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCTACCAAAGGCag                                                                                                                                                                            >  2:613603/1‑140 (MQ=255)
                                                                   gcgcTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCAc                                                                                                                                                                         >  2:436771/1‑141 (MQ=255)
                                                                   gcgcTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                              >  1:53095/1‑200 (MQ=255)
                                                                   gcgcTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                              <  1:479707/200‑1 (MQ=255)
                                                                       tGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGc                                                                                                                                                                              <  3:258773/132‑1 (MQ=255)
                                                                        gggATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATg                                                                                                                                                                    >  2:820109/1‑141 (MQ=255)
                                                                        gggATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGa                                                                                                                                                           >  4:799351/1‑150 (MQ=255)
                                                                         ggATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACa                                                                                                        <  1:418974/200‑1 (MQ=255)
                                                                          gATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGaa                                                                                                                                                                  >  2:226746/1‑141 (MQ=255)
                                                                             cTGGCGATCGCTTCCCACGGCATTCATGTGCACGAACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAGCTGGCGCGCCTGCTGGCGACCAAAGGCATCAcc                                                                                                                                                                        <  3:561841/132‑1 (MQ=255)
                                                                             cTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCAcc                                                                                                                                                                        <  3:225809/132‑1 (MQ=255)
                                                                             cTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGa                                                                                                    <  1:342926/200‑1 (MQ=255)
                                                                               ggCGATCGCTTCCGACGGCATTCATATGCAGGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCa                                                                                                                                                                      <  3:889246/132‑1 (MQ=255)
                                                                                   aTCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATAtc                                                                                                                                                <  4:885264/150‑1 (MQ=255)
                                                                                    tCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGaaa                                                                                                                                                                 <  3:83349/132‑1 (MQ=255)
                                                                                       cTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAg                                                                                          >  1:858097/1‑200 (MQ=255)
                                                                                        ttCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAAc                                                                                                                                           <  4:143956/150‑1 (MQ=255)
                                                                                         tCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGc                                                                                        >  1:338147/1‑200 (MQ=255)
                                                                                                gCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCACACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAg                                                                                 >  1:24113/1‑200 (MQ=255)
                                                                                                 cATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGa                                                                                                                                                    <  3:194699/132‑1 (MQ=255)
                                                                                                  aTTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAAcc                                                                                                                                          <  2:165848/141‑1 (MQ=255)
                                                                                                     cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATAtc                                                                                                                                                >  3:682032/1‑132 (MQ=255)
                                                                                                     cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATAtc                                                                                                                                                >  3:554915/1‑132 (MQ=255)
                                                                                                     cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCaaa                                                                                                                                       >  2:244261/1‑141 (MQ=255)
                                                                                                     cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGcc                                                                                                                              >  4:167402/1‑150 (MQ=255)
                                                                                                     cATATGCACGCACCGGAAGAAGGTTTACGGATGCCCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGAGCCTGCTAGCGACCAAACGCATCACCCATGAAATCCATACACCGGCTAtc                                                                                                                                                >  3:395946/1‑132 (MQ=255)
                                                                                                      atatGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATAtct                                                                                                                                               <  3:772544/132‑1 (MQ=255)
                                                                                                      atatGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGAc                                                                           <  1:710983/200‑1 (MQ=255)
                                                                                                        atGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAagag                                                                                                                                    <  2:521026/141‑1 (MQ=255)
                                                                                                         tGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTtc                                                                        >  1:773936/1‑200 (MQ=255)
                                                                                                              gcacCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGcc                                                                                                                     <  4:410537/150‑1 (MQ=255)
                                                                                                                 ccGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAagag                                                                                                                                    >  3:565649/1‑132 (MQ=255)
                                                                                                                 ccGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAagag                                                                                                                                    <  3:211962/132‑1 (MQ=255)
                                                                                                                 ccGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCAtt                                                                                                                  >  4:463347/1‑150 (MQ=255)
                                                                                                                   ggAAGAGGGTTTACGGATGCTCGGTACGGCGAGGGATAAAGCGG‑CGGATGCACGCACCAACCTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATACCGGATAGCTCAACCAAAGAGAAAGCCCAGCAGGCCATTgg                                                                                                                <  4:88996/150‑1 (MQ=255)
                                                                                                                   ggAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACgg                                                              <  1:204581/200‑1 (MQ=255)
                                                                                                                         agGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACtt                                                                         >  1:711060/1‑183 (MQ=255)
                                                                                                                          ggggtACGGATGTTCGGTACGTATGTGGGTAAAGCGG‑CGGATGCATGCACCAAACTGGCGCTCGTGCTGGCGACCAAAGGCAACACCCATGAAATCCAGATCCCTGATATCTCAACCAAAGAGAAAGCCCAGTAGGCCATTGGCCTGAAc                                                                                                         <  4:511144/146‑1 (MQ=255)
                                                                                                                          ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCAtt                                                                                                                  >  2:370312/1‑141 (MQ=255)
                                                                                                                          ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                         <  4:283521/150‑1 (MQ=255)
                                                                                                                          ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATccc                                                       >  1:297605/1‑200 (MQ=255)
                                                                                                                           gTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTg                                                                                                                 >  2:845204/1‑141 (MQ=255)
                                                                                                                              tACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAg                                                   <  1:552346/200‑1 (MQ=255)
                                                                                                                                cGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGcc                                                                                                                     <  3:613243/132‑1 (MQ=255)
                                                                                                                                cGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGaa                                                                                                   >  4:491054/1‑150 (MQ=255)
                                                                                                                                     gCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGgaag                                            >  1:184941/1‑200 (MQ=255)
                                                                                                                                      cTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATc                                                                                             <  4:388232/150‑1 (MQ=255)
                                                                                                                                       tCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                              <  3:306701/132‑1 (MQ=255)
                                                                                                                                       tCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                              <  3:504993/132‑1 (MQ=255)
                                                                                                                                       tCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                              <  3:496885/132‑1 (MQ=255)
                                                                                                                                        cgggtagggcaagggtAAAACGGCCGGATGAACGCACCAACCTGGGCGGCCTGCTGGCGACAAAGGGAACCCCCCATGAATTCCAGTTCCCGATAATCTCAACC‑AAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                         <  1:915149/185‑1 (MQ=255)
                                                                                                                                        cGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                         >  1:868133/1‑200 (MQ=255)
                                                                                                                                        cGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                         >  1:823270/1‑200 (MQ=255)
                                                                                                                                        cGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                         <  1:579138/200‑1 (MQ=255)
                                                                                                                                        cGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                         <  1:167404/200‑1 (MQ=255)
                                                                                                                                          gTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGa                                                                                                           >  3:296864/1‑132 (MQ=255)
                                                                                                                                          gTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAg                                       >  1:784763/1‑200 (MQ=255)
                                                                                                                                            aCGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                         <  3:633163/132‑1 (MQ=255)
                                                                                                                                             cGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCa                                    <  1:679804/200‑1 (MQ=255)
                                                                                                                                               gCGATGGATAAAGCGG‑CGGACGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAACGGCACCACCCCTGAAATCCAGCTCCCGGATATCTCTACTAAAGAGAAAGCCCAGCAGCCCCTCGGCATGGACATg                                                                                                      >  3:392818/1‑132 (MQ=255)
                                                                                                                                                 gATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGa                                                                                                    <  3:894410/132‑1 (MQ=255)
                                                                                                                                                   tGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAAc                                                                                                  <  3:163133/132‑1 (MQ=255)
                                                                                                                                                    ggATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCTATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTaaaa                             >  1:554875/1‑200 (MQ=255)
                                                                                                                                                    ggATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAAAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCa                                                                               >  4:316307/1‑150 (MQ=255)
                                                                                                                                                    ggATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCAGGAAATCCAGATCCCGGATATCACAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCCAGGCCGAGAAGCa                                                                               >  4:362245/1‑150 (MQ=255)
                                                                                                                                                      aTAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCATCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                           <  1:917585/200‑1 (MQ=255)
                                                                                                                                                      aTAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                           <  1:311932/200‑1 (MQ=255)
                                                                                                                                                        aaggcga‑cgGATGAACGCACCACACTAGCGAACCGTCTGGCGACCAAAGGCATCACCCATGGAATCCCGATCCGGGATATCTCAACCATAGGGAAAACCCAACAGACCATTGGCCTGAACATGGGACAAATc                                                                                             <  3:710503/129‑1 (MQ=255)
                                                                                                                                                        aaaGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATc                                                                                             <  3:819363/132‑1 (MQ=255)
                                                                                                                                                          aGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACtt                                                                         <  4:711000/150‑1 (MQ=255)
                                                                                                                                                           gcgg‑cgGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAg                                                                                 <  2:93035/141‑1 (MQ=255)
                                                                                                                                                                            ccAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCaaaa                                                                 >  2:775228/1‑141 (MQ=255)
                                                                                                                                                                                ggccaatggcCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGtt  >  1:289666/9‑200 (MQ=255)
                                                                                                                                                                                        gcCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACgg                                                              <  3:483719/132‑1 (MQ=255)
                                                                                                                                                                                        |                                                                                                                                                                                               
CGCTGGATGCAGGCGCGACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGG‑CGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTT  >  NC_000913/4288833‑4289207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.