mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.27.1 revision 87c22d663cc3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4542690 | 29 (0.880) | 3 (0.090) | 3/582 | 4.1 | 8.6% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 36 (1.120) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | 4377070 = | 24 (0.730) | 3 (0.090) | 3/588 | 4.1 | 12.4% | coding (196/318 nt) | sugE | multidrug efflux system protein |
| ? | NC_000913 | 4377134 = | 19 (0.590) | coding (260/318 nt) | sugE | multidrug efflux system protein | |||||
| * | ? | NC_000913 | 3201319 = | 26 (0.790) | 3 (0.090) | 3/590 | 4.1 | 9.6% | coding (113/621 nt) | ygiM | SH3 domain protein |
| ? | NC_000913 | 3201440 = | 31 (0.950) | coding (234/621 nt) | ygiM | SH3 domain protein | |||||
| * | ? | NC_000913 | = 763666 | 43 (1.300) | 3 (0.090) | 3/592 | 4.1 | 7.3% | coding (653/1167 nt) | sucC | succinyl‑CoA synthetase, beta subunit |
| ? | NC_000913 | = 763887 | 34 (1.040) | coding (874/1167 nt) | sucC | succinyl‑CoA synthetase, beta subunit | |||||
| * | ? | NC_000913 | 639508 = | 39 (1.180) | 4 (0.120) | 3/586 | 4.1 | 10.2% | coding (564/564 nt) | ahpC | alkyl hydroperoxide reductase, C22 subunit |
| ? | NC_000913 | 639635 = | 32 (0.990) | intergenic (+127/‑118) | ahpC/ahpF | alkyl hydroperoxide reductase, C22 subunit/alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding | |||||