Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 42 117.4 2145065 96.9% 2078567 261.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,708,718 G→A 13.7% A600A (GCG→GCA)  rsxC → SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,7180GA13.7% 156.9 / 4.6 86A600A (GCG→GCA) rsxCSoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base G (41/27);  new base A (6/3);  total (56/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

CCTATTGTGATTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT  >  NC_000913/1708446‑1708988
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                              
ccaatggggATGAAAGCGGGCCAAGGCCCGGATAACAGGGCAATTATGGCAGGCCGGGAAGCCGGTAAAGCGCAAACCAGAGCGAAACAGGCAGAACTGAGGCAAACTAACGACGCAGCAACCGTGGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcg                                                                                                                                                                                                                                                                              <  2:60049/267‑1 (MQ=25)
ccTATTGTGATTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATACGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcg                                                                                                                                                                                                                                                                              >  1:390056/1‑275 (MQ=255)
 cTATTGTGATTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTCCCAAAgcgcgc                                                                                                                                                                                                                                                                             >  1:853741/1‑275 (MQ=255)
 cTATTGTGATTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGACCGCGCCAACGCGAGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGACGCCATTGCACGGGCCCAGgcgagc                                                                                                                                                                                                                                                                             >  1:995018/1‑275 (MQ=38)
 cTATTGTGATTAAAGCGGGCGAACGCCCGGATAACAGGGCAATTATTGAAGAACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcg                                                                                                                                                                                                                                                                              <  1:667311/274‑1 (MQ=255)
        gATTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTg                                                                                                                                                                                                                                                                       >  2:701272/1‑274 (MQ=255)
         aTTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACCGCAACAGGCTAATGCGGAGCCAGAACCACAGGTCGATCCGCGCCAAGCCCCCGTCGAAGCCGCTATCGCCCGACCCAAACCCCGCAAACGGGa                                                                                                                                                                                                                                                                     >  2:189572/1‑275 (MQ=255)
          ttAAAGCTGGCGAACGCCCGGATAACAGGTCAATTATTGCAGAACGGGAAGCCCGTAAACCGCAAGGCAGAGGGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTAACGCCGGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAAGGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGaa                                                                                                                                                                                                                                                                    <  1:497835/275‑1 (MQ=25)
          ttAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACCGGTCGATCCGCGCAAAGCCGCCGCCCAAGCCGCCATTCCCCGCTCCCAAGCACGCaaagcggaa                                                                                                                                                                                                                                                                    >  2:865095/1‑268 (MQ=37)
          ttAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGCAACCAGAAAACAAGGTCGATCCCAGCAAAGCCGCCGTCGAAGCGGCTCTTGCCCTGGCCAAAGCGCGCAACCTGGa                                                                                                                                                                                                                                                                     >  2:745492/1‑274 (MQ=37)
            aaaGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAAc                                                                                                                                                                                                                                                                   <  1:701272/274‑1 (MQ=255)
              aGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGACGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTCCCACAACGCGCAAGCCGGAACAGc                                                                                                                                                                                                                                                                >  1:791347/1‑275 (MQ=255)
              aGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGACCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCCGGAACAGCAACAGGCTAATGCGGCACCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGGCGCCGCCGCCATTGCCCGTGCCAAAGCCCACAAggtagacccgg                                                                                                                                                                                                                                                                >  2:904797/1‑265 (MQ=255)
                ccaaagcgttattacagaccAGGGCAATTATGGCAGAACGGGAAGCCCGTAAAGCGCAAGCCGGAGCAAAACAGGCTGAACTGCATGAAACTAGCGACGCAGCAACCGTTGCTGGTCCACGTAAAACTGCCGTTGAAGCAGCTATCCCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                                                              <  2:426369/256‑1 (MQ=21)
                cGGGCGAACGCCCGGATAACAGTGCCATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                                                              <  1:285374/275‑1 (MQ=255)
                cGGGCGAACGCCCGGATAACAGGGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCaa                                                                                                                                                                                                                                                              <  1:612214/275‑1 (MQ=255)
                cGGGCGAACGCCCGGAAAACAGTGCAATTATGGCGGCACGGGAAGCCCGGAAAGCCCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACGGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCaa                                                                                                                                                                                                                                                              <  2:538091/275‑1 (MQ=255)
                 gggCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCCAACTAACGCCGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGACGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGACCAGCAACAGGCTAATGCGGAACCAGAAGAACCGGTCGATCACCGCAAAGCCGCCGTCGAAGCCGCTATTCCCCGCGCCCAAgcggcccaccgggaaccgcca                                                                                                                                                                                                                                                              >  2:651654/1‑256 (MQ=255)
                   gCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGAGCCAAGCCGCCGTCGAAGCCCCTATTTCCCGTCCCCACGCGAGCAAGCTGGAACAGCAACAg                                                                                                                                                                                                                                                           >  2:721704/1‑275 (MQ=255)
                           ccGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGc                                                                                                                                                                                                                                                   >  1:510535/1‑275 (MQ=255)
                               aaaaaaGTGAAATTATTGCAGCACGGAAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTTCTGATCCACGTAAAACTGCCGTGGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGa                                                                                                                                                                                                                                                <  1:1047728/269‑1 (MQ=255)
                                 aaCAATGAAATTATTGGAGAGCGGGAAGCCCGGAAAGCGGAAGCCAGAGCGAAACAGGCAGAACGGCAGCAAACTAACGACGAAGCAACCGTGGCTGATCCACGTAAAACTGCCGTGGAGGCAGCTATCGCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAAc                                                                                                                                                                                                                                              <  2:8584/274‑1 (MQ=21)
                                   cacggaaagtagagcaggaCGGGAAGCCCGTAAAGCGCAAGCAAGAGCGAAACAGGCAGAACTGAAGCAAACGAACGCCGCAGCAACCGGTGCTGAGCCACGTAAAACGGCCGTTGAAGCAGCTACCGCCCGCGCCAAAACGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCag                                                                                                                                                                                                                                           <  2:853740/262‑1 (MQ=21)
                                   cAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCag                                                                                                                                                                                                                                           <  1:596150/275‑1 (MQ=255)
                                     gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGCACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCTGGCAAGCTGGAACAGCACCAGGCTAACGCGGAACCagaa                                                                                                                                                                                                                                         >  1:310923/1‑275 (MQ=255)
                                     gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACACCAGGTCGATCCGCGCAAAGCCGACGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACTGGAACAGCAACCGTCTAATGCggcagcaaa                                                                                                                                                                                                                                          >  1:1061812/1‑267 (MQ=25)
                                     gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCCGGCAAACGGGGACAGCAAAAGGCTAATGAGGAAGCaaa                                                                                                                                                                                                                                          >  2:660407/1‑272 (MQ=25)
                                     gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCACAACAGGCAAGCTGGAACAGCAAAAGGCCAACGCGGAACCaga                                                                                                                                                                                                                                          >  2:761399/1‑274 (MQ=255)
                                     gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTACTGCGGAACCagaa                                                                                                                                                                                                                                         >  1:840408/1‑275 (MQ=255)
                                     gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAACCCCGCAAGACGGCACAGCAACCGGCCAATGGCGAAccggg                                                                                                                                                                                                                                          >  2:353367/1‑271 (MQ=25)
                                     gTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCCATTGCCCGTGCCCAAGCGCGCAAGCTGGAACAGCAACAGGCTCATGCGGAACgagag                                                                                                                                                                                                                                         >  1:1049627/1‑274 (MQ=255)
                                       gCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTCTTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACCGGCGAATTCCGAACCagaaa                                                                                                                                                                                                                                        >  2:684993/1‑273 (MQ=255)
                                        cAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCGATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCAAACGCGGCACCagccca                                                                                                                                                                                                                                       >  2:588319/1‑270 (MQ=25)
                                        cAATTATGGCAGCAAGGGAAGCCCGTAAAGCGAAAGCCAGAGCGAAACCGGGAAAACGGCAGCCAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAGGCAGCTATCGCCCGCGCCAAAGCGAGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCagaaga                                                                                                                                                                                                                                       <  2:1043630/274‑1 (MQ=21)
                                           ttattGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCACAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTCCCAAAGCGCGCAACCTGGAACAGCAACAGGCTAATGCGTAACCacagaaaccg                                                                                                                                                                                                                                   >  1:514263/1‑266 (MQ=255)
                                             attGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCCGAACAACAGGTCGATCCGCGCAAAGCCGACGTCGACGCCGCTCTTGCCCGTGCCAAATCGCGCAAGCCGCACCAGCAACAGGCCAAGGCGGAGACAAAAGAAAAgg                                                                                                                                                                                                                                  >  2:970595/1‑274 (MQ=25)
                                                gcagcaCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAACGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAGAAGGCAAGCGGGAACAGCAAAAGGCTGATGCGGACCAGGAAGGACAgggtg                                                                                                                                                                                                                               >  1:633583/1‑271 (MQ=25)
                                                gcagcaCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGACCAAGCCGCTATTGCCCGTGCCCAAGCCAGCCAGCTGGAACAGCAACAGGCGAATGcacaaacaaacgacccggtac                                                                                                                                                                                                                               >  1:247091/1‑254 (MQ=25)
                                                gcagcaCGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAAAAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGAAAGCTGGAACAGCCACAGGCTACTGcctgtctcttatacaaaactc                                                                                                                                                                                                                               >  1:426369/1‑254 (MQ=25)
                                                       gggAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCgcgc                                                                                                                                                                                                                       >  1:669394/1‑275 (MQ=255)
                                                                       gcAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCCGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGGCGATCCGCGCAAAGCAGCCGACgca                                                                                                                                                                                                        >  1:27965/1‑272 (MQ=255)
                                                                       gcAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGAAAGCTGGAACAGCAACAGGCTACTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCCGTCGaca                                                                                                                                                                                                       >  1:664059/1‑273 (MQ=255)
                                                                        cAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGAACCGACCaaacaccccatcaacgc                                                                                                                                                                                                      >  1:994164/1‑261 (MQ=255)
                                                                                 gccaaaGAGGCAGAACTGAAGGAAACTAACGCGGCAGCAACCGCTGCTGATCGAGATAAAATTGCCGTGGGAGCAGCACTCGACCCGGAAAAAGCGGGCAAGCTGGAACAGCAACAGGATAATGCGGAACCAGAACACCAGGTCGATCCGCGTAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGc                                                                                                                                                                                             <  2:616165/272‑1 (MQ=17)
                                                                                 gCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTTCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGc                                                                                                                                                                                             <  1:851222/275‑1 (MQ=255)
                                                                                     aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGCACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGCGCCCAAGCACGCAAGCTCGCACAGCAACAGGCCAATGCGGAACCAGAAGAACACGTCGATGCCGGCAAACCCGCCAGCGCAGGCGCTATTGccacc                                                                                                                                                                                         >  2:649275/1‑272 (MQ=18)
                                                                                     aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATAGCCCGTGCCCAAGCGCGCAACACGGAAACACCACCGGATGATGCGGGAACAGAAGACGAGGTCGAACCGCTCAAAACGGCCGttacaccagctcttgtccgc                                                                                                                                                                                         >  2:384945/1‑256 (MQ=18)
                                                                                     aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCCGAAGAACAGGTCGATCCGCGCCAAGCCGCCGTCGAAGCCGCTATTGCACg                                                                                                                                                                                          >  1:567086/1‑274 (MQ=255)
                                                                                          gCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACAAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCCAATGCGGAACCag                                                                                                                                                                                                                                           >  1:549767/1‑220 (MQ=255)
                                                                                               aCTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCCAAGCCGCTATTGCCCGAGCCAAAGCAc                                                                                                                                                                               >  1:998164/1‑275 (MQ=255)
                                                                                                        aaCTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGCAGAACAGGTCGATCCGCGCCAAGCAGCCGGCGAAGCCGCTATTGCCCGTGCCAAAacactgaacacgg                                                                                                                                                                      >  1:901228/1‑266 (MQ=255)
                                                                                                           tAACGACGCAGAAACCGTGACTGATCAACGTAAAACTGCCGTTGAAGCAGCGAGCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAAc                                                                                                                                                                   <  1:865096/275‑1 (MQ=255)
                                                                                                                gccacgcaACCGTTGCTGATCCACGTAAAACTGCCGTTAAAGCAGCTATCGCCCGGGCCAAAGCGCCCAAGCTGGAACAGCAAAAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCaa                                                                                                                                                              <  1:957208/270‑1 (MQ=255)
                                                                                                                acgCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCCGAAGAACAGGTTGCTCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCgcgctcaggccaaacaagacgcccagcca                                                                                                                                                              >  1:465581/1‑250 (MQ=14)
                                                                                                                     gcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAAAAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGCCGCAGCGGCTATTGCCCGACCCCAGACGCGCAACCCAGAACACCAACAgta                                                                                                                                                         >  2:798950/1‑273 (MQ=17)
                                                                                                                           gtggccgATCCACGGAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                                                                                                                                                   <  1:566365/269‑1 (MQ=255)
                                                                                                                           gTTGCTTATCCACGTAAAATGGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGGTGGAACCGCAACAGGCGAAGGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                                                                                                                                                   <  1:761399/275‑1 (MQ=255)
                                                                                                                           gTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                                                                                                                                                   <  1:613412/275‑1 (MQ=255)
                                                                                                                                tGATCCACGGAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAACAACAGGCTAATGCGGAACCAGAACAACAGGTCGAACCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGGCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGc                                                                                                                                              <  1:20176/275‑1 (MQ=255)
                                                                                                                                 aaTCCACCGAAAACTGCCGTTGAAGCAGCTATCGCCC‑CGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAAGTCGGAACCCGACCAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCa                                                                                                                                            <  1:861051/274‑1 (MQ=255)
                                                                                                                                     cACGGAAAACTGCCGGCGAAGCAGCTATCGCCCGCGCCAAAGCGGGCAAGCTGGAACAGCGACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCa                                                                                                                                            <  1:93539/272‑1 (MQ=255)
                                                                                                                                       cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCCTGCCAAAGCACGCAAGCTGGAACAGCCAAAGGCCAATGCACAGCCAGaatc                                                                                                                                       >  1:310520/1‑273 (MQ=255)
                                                                                                                                       cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCACGTGCCCAAGCGCGCAAGCTGGAACAGCAAAAGGCTAATGCGGAACCAGAAGAAAAGGTCGAACCCCGCAAAGCAGCAGTCGCAGCGGCTATTGACCGGTCCCAAACACACAAGCTCGAAAAGCAACCGGCTAATGCCAAGCCAGaaaa                                                                                                                                       >  2:772311/1‑273 (MQ=17)
                                                                                                                                            gatcgCCGATGGAGCAGCTATTACCCATGACAAGGCGGCCAACCAGGAACAGAAACAGGCACAGGCGGACCCACGACAGATGGGTGATCCGCGCAATGTCGCCGTACGAGCCGCTCTTGCCCGTGCAACAGCGCGCAAGCAGGAACAACAACAGGCTAATGCGGAAGCAGAAGACCATGTCGATCCACGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGaaca                                                                                                                                       <  2:669394/266‑1 (MQ=9)
                                                                                                                                                 cggctGAGGCAGCTGACGGCGGCGCCAACGCGGCCAAGGCTGAACAGCTACAGGGAAATGCGGAACCTGAAAGCGCGGCTGCTCCGCGCAAAGCCGCCGGTAGAGCGGCTATTGCCCGCGCAAAAGCACGGAAGCTGGAACAGAAACAGGCTAATGCCGAGCCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt                                                                                                                             <  2:618806/271‑1 (MQ=14)
                                                                                                                                                 ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACCGCAACAGGCTAATGCGGAACCAGAAGACCAGGTTGATCCGGGCAAAGCTGCCGTCCACGCCGCTATTGCACGAGCCAAAGCAAGCAAGCTGGAACAGAAACAGGCCAATGACGAGCCGGAAGAACAGGtggc                                                                                                                              >  1:30441/1‑271 (MQ=14)
                                                                                                                                                 ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACCGGCCAATGCGTGACAAGAAGAACAGGTTGATCCGGGCAAAGCTGCCGTAGAAGCCGCTAGTGCCCGTGCCAAAGCAAGCAAACTGGAACAGAAACAGGCCAATGCCGAGCCCACACCACAGGACGa                                                                                                                              >  2:860499/1‑274 (MQ=14)
                                                                                                                                                  cGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACCGGCTAATGCGGCACCAGAACAACAGGGCGATCAGAGCAAAGCCGGCGTCGAAGCCGCTAATGCACGAGCCAAAGCACGCAAGCCGGAAACGCAAACGGCTacaacagacacacaacacacgggcggcc                                                                                                                            >  2:204130/1‑248 (MQ=11)
                                                                                                                                                               aTCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGACGCCGCTATTGCCCGCGCCCAAGCCAGCAAAGCGGAACAGCAAAAGGCTAATGCCGAACCCGAATACACGGCTGAAGCGCGCAAAGCGGCAGTCGCAGCCGCTATTGCCGGTCGCCATGCCAGCAAACCGCAAAAGCAAAAGGCAAATCAGGACCCAGaacaaacatggtacgcgcacaaaccgga                                                                                                               >  2:620941/1‑252 (MQ=2)
                                                                                                                                                                  gCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCCCGCAAGCGGGAACAGCAACCGGCTAATGCCGAGCCAGAAACACAGGTCGATCCGCCCAACGccgccg                                                                                                             >  1:164139/1‑274 (MQ=255)
                                                                                                                                                                       cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCAGGACCAGCAACAGGCCAATGCCGAACCAGAAGAACAGGTCGCTCAGCGCCAAGCCGCCGTCCaaa                                                                                                       >  1:620680/1‑274 (MQ=14)
                                                                                                                                                                       cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGAGCAAAGCCGCCGTCGAAGCCGCTATTGCACGTGCCAAAGCAAGCAATGTCGAACAGCAACAGGCTAATGCCGAGCCAGAACAAAAGGTCGATCCCCGCCAAGCCGGCGTCGaa                                                                                                        >  1:688957/1‑274 (MQ=14)
                                                                                                                                                                       cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCCGGACCAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCCCAAAGCCGCAGTCGACGCCGCTATTGCCCGCACCAAAGCCCGCAACCCGGACCAGCAACAGGCCAATGCGCACGCATAACAACCGGTACAACCACCCAACGCCCCCGttcccc                                                                                                       >  2:905038/1‑270 (MQ=11)
                                                                                                                                                                        aacgacgcgggcAAGCGGGAAAAACCACAGCCAAATGAAGAACCAGAACCACGGGACGATCCACGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGTGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAATAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg                                                                                                       <  1:982174/268‑1 (MQ=14)
                                                                                                                                                                         acAAAGCGCGCAAGCTGGAACAGAAAAAGGGTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg                                                                                                       <  1:833610/272‑1 (MQ=255)
                                                                                                                                                                            aaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACCGGAACAGCAACAGGCTCATGCGCTGACAGAAGAACAGGTCGATCCGCGCCAAGACGCCGTCGAAGCGGCCATTGCCCGTGCCAAGGACCGCAAACAGGAACAGACACAGGCCAATGCGGTGCCAGAAACACAAGGTGCTCACCGCACAGCAGACGTCGAAGcgca                                                                                                   >  2:895400/1‑271 (MQ=11)
                                                                                                                                                                                                cAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTTGACGCCGCTATTGCCCGCGcccacgccct                                                                              >  1:454141/1‑267 (MQ=255)
                                                                                                                                                                                                cAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCCGTGGAAGCAGCTATTGCCCGTGCCAAAGCACACAAACCGGAACAGAAACAGGCTAATGCCGAGCCAGAAATACAGGTAGATCAGCGCAAAGACGTCGTCAGAGCGGCGATTGCCCGAGCCAAAgcca                                                                               >  1:836609/1‑272 (MQ=14)
                                                                                                                                                                                                cAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCCGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGTGCCCAAGCCCGCAAAGCGGAAAAACAACAGGCTAATACCGGACCCGAAGCACCGGTAGACCCGCGCCAAGCGGCAGGCGACGTCGCCATTGcagggaccaacggcca                                                                              >  2:15021/1‑260 (MQ=11)
                                                                                                                                                                                                 aaCAGGCTAATGACGAACCAGAACAACAGGTCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgcg                                                                              <  1:189572/274‑1 (MQ=255)
                                                                                                                                                                                                     ggCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGAACAGCAACAGGTTAATGCCGAGCCCGAAAAACAGGTAGATCAGCGCAAAACCGCCGTCGAAGCCGCTATTGCCCGACTCAAAGCCCGCaaaa                                                                         >  1:849902/1‑274 (MQ=17)
                                                                                                                                                                                                          aTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCACGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCTTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGGCGAAGCCGCTATTGCCCGACCCAAAACGCGCAAACggca                                                                     >  1:791853/1‑272 (MQ=255)
                                                                                                                                                                                                                aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATACCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGAGCCAACGCGCGCAAACGGGAACacaaa                                                              >  1:685117/1‑271 (MQ=255)
                                                                                                                                                                                                                      aacaacAGGTCGATCCGCGCAAAACCGCCGGCGAAGCTGCTATTACCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGc                                                         <  1:588319/274‑1 (MQ=255)
                                                                                                                                                                                                                          acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTCGATCCGCCCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCACGAAAACCGGAACAGCAACAGCCTAATGCGGTACCCGAACGACAGGTCGATCCGCACAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCGCACAACCGGAACCAGCAACGGGCCAATg                                                    >  2:307642/1‑275 (MQ=14)
                                                                                                                                                                                                                          acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCCATTGCCCGCGCCAACGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGACCCAAAACACCAGGCCGACCCGCCCAACGCCCCCGTCACAGCGGCTATTTCCCCAACCACAGCCCACAAAGCGGGACAGCCACCAGCtcct                                                     >  2:1006919/1‑271 (MQ=14)
                                                                                                                                                                                                                              gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACCGGCTAATTCTGCACCAGAAGCACAGGTGGATCCGCGCAAAGCCGCCGTCGAAGCCGCTGTTGCCCGTGCCAAAGCACGCAAACTGGAACAGCAACCGGCTAATGCCGAGCACAAAGAACAGGCACCTACGCGCCAAGCCGCCGTCGAAGCGGCCACTCCACAAGCACAAACACCAAAGCGGGAACAGCAACCgcactctcagag                                                >  2:321419/1‑264 (MQ=11)
                                                                                                                                                                                                                                tgaccccagcAAAGTCGCCGCCTAAGGCGCTATCACCCGGCCCAAAGCGCGCAAGCTGGAACAGCAACAGTCTAATGCGGACCCCGAAGACCAGGCCGATCCGCGCAAAGCCGCCGTCGAGGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGc                                              <  1:721704/267‑1 (MQ=14)
                                                                                                                                                                                                                                       cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCACGCAAACCGGCACAGCAACAGGCTAAATCCGAGCCCGAAGCACAAGTACAGCCGCGCAAACACGCCGGCGACCGCGCTATTGCCCGCCCCCAGGCCCGCAGAAGGTACCCGCAACCGGCTAATAACGAGCCacaag                                        >  2:366890/1‑274 (MQ=14)
                                                                                                                                                                                                                                       cgaaaaGCAGCCGTCGAAGCAGCTATTGCCAGAGCCACAGCGCGCAAGCTGGAACAGCCACAGGCTAATGCGGAACCAGAAGACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga                                       <  1:326416/272‑1 (MQ=255)
                                                                                                                                                                                                                                                 ccggagAAGCAGCTATTGCCCGGGGAAAAACGGGCAAGGGGGAACAGCAACAGGAAAATGAGGAACCAGAACAACAGGTTGATCCGCGCAAAGCCGCAGGCGAAGCCGCTATTGACCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt                             <  1:878395/270‑1 (MQ=14)
                                                                                                                                                                                                                                                                            aaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCCCGAGCCCAAGCCACCAAAGCGGAACAGCAAACGGCTAAGACCGAGGCAGAACAAAAGGTTGACCCGCGCAAACCGGCCGGCgtgccggcc  >  2:487778/1‑267 (MQ=11)
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                              
CCTATTGTGATTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT  >  NC_000913/1708446‑1708988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A