Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F9 I0 R1 131 136.1 2723430 98.1% 2671684 229.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,708,751 A→G 12.1% E611E (GAA→GAG)  rsxC → SoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,708,7510AG12.1% 218.8 / 4.5 102E611E (GAA→GAG) rsxCSoxR iron‑sulfur cluster reduction factor component, putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (52/33);  new base G (11/4);  total (64/38)
Fisher's exact test for biased strand distribution p-value = 5.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 108 total aligned reads displayed.

AGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT  >  NC_000913/1708514‑1708988
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                              
aGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAAc                                                                                                                                                                                                                                               <  1:1337101/239‑1 (MQ=255)
    cAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAGCGCGCCAGCTGGAACAGCAACAGGCTACTGCCGAGCCaga                                                                                                                                                                                                                                           >  2:287553/1‑239 (MQ=255)
    cAAACCAGATCGAAACAGGCAGAACTGCAGAAACCGAACGAAGCAGCAACCGTTGCTTACCCGCGAAAAACTGCCGTTTAAGCAGCTATCGGCCGCACCAAAGCGCGGAAGCTGGAGGAGCAACAGGCTAATGCGGAACCAGAACAAGAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCag                                                                                                                                                                                                                                            <  2:1337701/238‑1 (MQ=18)
     aaGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCagaa                                                                                                                                                                                                                                          >  1:445210/1‑239 (MQ=255)
         cAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCagaaga                                                                                                                                                                                                                                        <  1:948534/237‑1 (MQ=255)
         cAGAGCGAAACAGGCAGAACGGCAGCAACCGAAGGGCGCAGCAACCGGTGCTGACCCACGAAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAAc                                                                                                                                                                                                                                      <  2:382620/239‑1 (MQ=18)
            agCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCCACAGGCTAATGCGGACCAAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCCAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAg                                                                                                                                                                                                                                    >  1:1099284/1‑238 (MQ=255)
             gCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAgg                                                                                                                                                                                                                                   <  1:1246394/238‑1 (MQ=255)
                 aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACCGGAACAGCAACAGGCTCATGCGGAGGCCGAAGACCAGATCgc                                                                                                                                                                                                                               >  2:13557/1‑237 (MQ=18)
                               cagcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGAAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAgccg                                                                                                                                                                                                                 >  1:640536/1‑238 (MQ=255)
                                agcaAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCGGGAACAGCAACAGGCTAATCCGCAGACAGACGAACAgccccctctgcgaaaagcagc                                                                                                                                                                                                                >  2:856185/1‑218 (MQ=18)
                                      cTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACCGGCTAATGCGGAACCAGAACAACAGGTCGCTCAGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGTACAGCAACAGGCTAATGCGGAACCAGAAAAACGAGTCGATCAGCGCCAACCAGCCGtggca                                                                                                                                                                                                         >  2:9709/1‑235 (MQ=18)
                                       tAACGCCGAAGAAACCGTGGCTGATCCTGCAAAAACGGCCGATGAAGCAGCTAGCGCCGGGCCAAAAGCGCGCAAGCAGGAACACCAACAGCCTAATGAGGAACCAGAACCACAGGCCGATCCACGCAAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag                                                                                                                                                                                                       <  2:411275/239‑1 (MQ=14)
                                       aaacagcggccaaaCCGTAGAGGACCCACGCAAAACTGCCGTCGAAGACGCTCACGCCCGCGACAAAGGACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACAAGAAGACCAGGTCGATCCGAGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag                                                                                                                                                                                                       <  2:942367/227‑1 (MQ=11)
                                         cgcaccaagaaaCCATGGCTGAGCCACGCAAAACGGCCGTGAAAGCAGGTATTGCCCGCGACAAAGCGGGAAAGCAGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGc                                                                                                                                                                                                      <  2:445210/228‑1 (MQ=11)
                                         acgcggccgaaaccccggataacccACGAAAAACTGCCGTAGAGGAAGCCAGCACCGGCGCAAAAGGGCGCAAGCGGGAACAGCAGCAGCCAAATACGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑Ag                                                                                                                                                                                                       <  2:179892/214‑1 (MQ=14)
                                             atcagcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAAGTCGATCCCCGCAAAGCCGCCGCAGACGCCGCTATTGCCCGAGCCAAAGCCCGCAAGCTGGACCAGCAACAGGCTAATGAGGAACAATAAGAACAGTTCGAGCCGAGCAAAgccccctcgacgacgcaca                                                                                                                                                                                                  >  2:737188/3‑226 (MQ=17)
                                                 gcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGGGCAAAGCCGCCGTCGA‑AGcgcctcttg                                                                                                                                                                                              >  2:114907/1‑230 (MQ=255)
                                                 gcaACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCCCAGAGCCGCCGTCGA‑CGCCGCTATTg                                                                                                                                                                                              >  1:948315/1‑238 (MQ=255)
                                                        ttGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTACTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAACGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTCCCCGTGc                                                                                                                                                                                       >  2:514010/1‑238 (MQ=255)
                                                            tGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAg                                                                                                                                                                                  <  1:1009401/239‑1 (MQ=255)
                                                              aTCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCCGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCTCGCAAAGCCGCCGTAGA‑AGCGGCTATTGCACGCGCCAAAGc                                                                                                                                                                                 >  2:434187/1‑238 (MQ=17)
                                                                ccACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCCGTCGA‑AGCCGCTATTGCCCGGGCCAAAGCAc                                                                                                                                                                               >  1:175598/1‑238 (MQ=255)
                                                                   cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCAAAGCGCGCAAGCCGGCACAGCAACAGGCTAATGCGGAGCCCGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGA‑CGCCGCTATTGCCCGTGcgacggccacgaa                                                                                                                                                                           >  2:275613/1‑227 (MQ=14)
                                                                   cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTGCCCTTGCCAAAGCACGCaa                                                                                                                                                                           >  1:390349/1‑239 (MQ=255)
                                                                   cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCa                                                                                                                                                                            >  1:486998/1‑238 (MQ=255)
                                                                   cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTAGTCCCCGGGCCAAAGCCCGCaa                                                                                                                                                                           >  1:753870/1‑239 (MQ=255)
                                                                   cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCCCGAAAGCTGGCACAGCAACAGGCTAAAGCGGAGCCAGAAGAACAGGTCGACCCGGCCAAAGCCCCCG‑CGACAGCCGCCATTGcccagacccagcactcaaa                                                                                                                                                                           >  2:81694/1‑223 (MQ=14)
                                                                   cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCACGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGCCGA‑AGCCGCTCTTGCCCGCGCCAAAACACGcca                                                                                                                                                                           >  2:154430/1‑237 (MQ=255)
                                                                   cGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCaa                                                                                                                                                                           >  1:753016/1‑239 (MQ=255)
                                                                        aaCTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTCCCAAAGCACGCAAACTgg                                                                                                                                                                      >  1:1136878/1‑239 (MQ=255)
                                                                          ctgctgcaggacaggcaaTCGCACGAGCAAAAGCGCGCAAACCGGAACAGCACCGGGCCAATACGGGGCCAGGAGAGCAGGTTTACCCGCTCAAAGCTGCCGTCGAAGCTGCTATTGCGCGAGCAAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGAGCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGaa                                                                                                                                                                    <  2:940155/222‑1 (MQ=14)
                                                                          cTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGaa                                                                                                                                                                    <  1:359257/239‑1 (MQ=255)
                                                                             ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCCCGCAAGCCGGCACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTCGGTCCGCGCAAAGCCGCCGTCGA‑CGCCGCCCTTGCCCCAGCCAAGGCCCGCAACCCGGcaca                                                                                                                                                                  >  2:107715/1‑238 (MQ=11)
                                                                             ccGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCGATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCACAGCCCCCGACGA‑GCCCGCTACCACCAGTGCCAAAGCGTGAAAGCGGGACCa                                                                                                                                                                  >  2:1127665/1‑238 (MQ=14)
                                                                              cGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGAACGCAAGCCGGAACAGc                                                                                                                                                                >  1:919449/1‑239 (MQ=255)
                                                                              cGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAAAACAGGTCGATACGCGCAAAGCCGACGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGc                                                                                                                                                                >  2:293912/1‑239 (MQ=255)
                                                                                tgaaagaagTTATCGCCAGCGCAAGACCGCCCAAGCGTGAACAGCACCAGGGTAATGCGGAACCAGAACAACAGATCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGAACAGCaa                                                                                                                                                              <  2:919449/236‑1 (MQ=14)
                                                                                 tGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCaa                                                                                                                                                              <  1:686366/238‑1 (MQ=255)
                                                                                              accgcgacaaaaGCGGGCAAGCAGGAACAGCAAAAGGATAATGGAGACCCAGAACACCAGGCTGATCCGCGAAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATgtgga                                                                                                                                                <  2:1343126/230‑5 (MQ=11)
                                                                                                  gcgcCAAAGCGCGCAAGATGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCa                                                                                                                                            <  1:1314181/239‑1 (MQ=255)
                                                                                                  gcgcCAAAACTCGGAAGCTGGAACAGCAACAGCCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCa                                                                                                                                            <  1:287553/239‑1 (MQ=255)
                                                                                                   cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGACGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAAAAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTCGC‑AGCCGCTATTGCCCGAGCCAAAGCCCGAAAGCCGGACCAGCAACAAGCCAATGCCggtccc                                                                                                                                            >  2:104674/1‑233 (MQ=14)
                                                                                                   cgcCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGCCGAGCCAg                                                                                                                                           >  1:504166/1‑239 (MQ=255)
                                                                                                    caacaatcggccAAGCGGGCACAGCAACAGGAGAGTGCGGAGGCAGAACACCCGGATAACACGGGAAAGACTGCAGAGGAGGCAGCTATTGCCCGTGCCAAACGACGCAAGCTGGAACAGCAACAGGCTAATGACGAGCCAGAACACCAGGCCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGcc                                                                                                                                             <  2:424220/225‑1 (MQ=9)
                                                                                                              gcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGACCCGCGCAAAGACGCCGCCGA‑AGCCGCTATTGACCAGGGCAAAGCACGCAAACGGGAACAGCAACAGGCTAATGCGGAACCAGAAAAACAGGTc                                                                                                                                >  2:1131926/1‑239 (MQ=11)
                                                                                                                            cAACAGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGCAGCCAGAACAACAGGTCGATCCGCGCAAAGCAGCCGTCGA‑CGCCGCCATTGCCCGCGCCAAAGCACGCAAGCTGGCACACAAACAGTCCAAAGCGGAGACATAACAACAgaccaagcagctcaaaa                                                                                                                   >  2:811437/1‑222 (MQ=11)
                                                                                                                            cAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGC‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCCGGCACAGCAACAGGCTAATTCCGAGCCAGAAAAACAGGTCAATCCGCGCaaaa                                                                                                                   >  1:521052/1‑237 (MQ=255)
                                                                                                                              aCAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCCCGCAAGCTCGCACAGCAACACGCTAATGCCGAACCAGAACAACAGGTCAAACCGCGCAAAGCCGCCGTCGC‑ATCTGCTATTGCCCGCGCCAACGCGCGCAAGGCGCAACAGCAAAACGCTACCGCCGCACACGAACAAGAGGTCGAACCGCCCAACgcg                                                                                                                 >  2:659619/1‑237 (MQ=11)
                                                                                                                                     aagggggAACCAGAACAGCAGTTCGATCCGCCTAAAGCGGCCGTGGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGa                                                                                                         <  2:486998/234‑1 (MQ=14)
                                                                                                                                      aagaggAAACAGAAAAAAAGGACGACCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTGCCCGTGCCAAAGCCCGACCGCTGGCACCGACCCAGGCTCCTGCAGAACCAGCACAAAAGGCCGATCCGCGCAAAGCCGCAGTCGa                                                                                                         >  1:738655/5‑238 (MQ=14)
                                                                                                                                      aTGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGACGATCCGCGCAAAGCTGCGGTAGA‑CGCCGCGATGGCCCGGGCCCAAGCCCGAAAGCCGGCACAGCAGACGGATGAAGCCGTGGCAGAAGAGCAGGTCGGGCCGCCCAGAgccgaataaaa                                                                                                         >  2:81355/1‑231 (MQ=14)
                                                                                                                                       ttcGGAACCAGACCAACAGGTGGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAg                                                                                                       <  1:1100851/237‑1 (MQ=255)
                                                                                                                                       tGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACTGGAACAGCAACAGGCTAATGCGGAGACCGAAGAACAGGTCGAACCGCGCAAAGCCGCCGTCGA‑CCCGGCTATTACACGCGCCAAAGCCCGCCAGCGAGAACAGCAACAGGCTAATGCCGAGCCCGAAGAACAGGTCAATCCACGCAAcgccgctcacgca                                                                                                        >  2:859405/1‑231 (MQ=11)
                                                                                                                                            aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGC‑AGCCGCTATTGCCCGAGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCt                                                                                                  >  1:564441/1‑239 (MQ=255)
                                                                                                                                            aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCt                                                                                                  >  1:1303580/1‑239 (MQ=255)
                                                                                                                                            aaCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTATTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCg                                                                                                    >  1:1240600/1‑237 (MQ=255)
                                                                                                                                              ccAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCCACCCGCGCAAAGCCGCCGTCGACGCCGCTAt                                                                                                >  1:722026/1‑239 (MQ=255)
                                                                                                                                                 gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAACCGGAACAGCAACAGGCCAATGCCGTACCAGAACAACAGGCTGATCCGCGAAAACACGCAGTAGAAACCGGTAtgg                                                                                              >  2:403392/1‑236 (MQ=11)
                                                                                                                                                      acaGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGa                                                                                         >  1:771686/1‑238 (MQ=255)
                                                                                                                                                          gTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTTGCAGCCGATATTGCCCGAGCCaa                                                                                    >  1:773580/1‑239 (MQ=255)
                                                                                                                                                            cGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCGGCTATTGCCCGCGCCAAAGCACGCAACCCGGAACAGCAACAGGCTAATGACGAGCCAGAAGACCAGGTCGGACCGCGCAAAGCCGCCGTCGCCGCGGCCATTGCCCGAGccgcg                                                                                   >  2:267888/1‑235 (MQ=14)
                                                                                                                                                                acgacaaagaccgccgTCGAAGACACTATAACACGCGCCAAAGAGCGAAACCTGGAACAACATAAGGCAAATACGGAACCAGAACAACAGGACGATCCGCGAAAAGCCGCCGTCGA‑AGCAGCTATCGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgcg                                                                              <  2:86255/229‑1 (MQ=11)
                                                                                                                                                                   cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACACCAGGTCGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCCCGAGCCAAAGCCCGCaa                                                                           >  2:785643/1‑239 (MQ=255)
                                                                                                                                                                   ccaaaatctgccgtacgaGCCTCTATCGCCAGTGCCTAGACGCCCAAGCTGGAACAGCAACAGAAAAATGCCGAACCAGAACACCAGGGTGAGCGGCGCAAAGCCGCGTTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAACTGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCa                                                                            <  2:1237051/221‑1 (MQ=11)
                                                                                                                                                                    gcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGCGCCCAAGCGCGCaa                                                                           >  1:488784/1‑238 (MQ=255)
                                                                                                                                                                        aactgccgTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACggg                                                                      >  1:891524/5‑239 (MQ=255)
                                                                                                                                                                         gccgccGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑CGCGGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCGTATCCCGTACCCGAACAACAGGTCCGTCCCCGAGACGCGGCCGCCGACTCCGCCATTCCCCTCGCCCAAgcccaagaagcggc                                                                     >  2:302822/1‑227 (MQ=14)
                                                                                                                                                                                           aTTGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTATTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAACCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCAATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGc                                                   <  1:69731/239‑1 (MQ=255)
                                                                                                                                                                                            ttGCCCGTGCCAAAGCGCGAAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCg                                                  <  1:1269838/239‑1 (MQ=255)
                                                                                                                                                                                              gccggggCCAAACCGCGCAATGTGGAACAGCAGCAGGTAAATGCGGAACCAGAAGCACTGGATGATCCGCGCAAAGCTGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGa                                                <  2:1171526/233‑1 (MQ=14)
                                                                                                                                                                                              gCCCGAGCCAAGGCGCGCAAACTGGAACAGCAACAGTCTAATGCGGAACCAGAAGACCAGGGCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGa                                                <  1:9709/239‑1 (MQ=14)
                                                                                                                                                                                                   tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCTGAACAACAGGTCGCTCCACGCAAAGCCGCCGCGCAAGCCGCTATTTCCCGGGCCACAGCTCGCACACCAGCACAGCATCCAGCTCATGccgtacccg                                           >  2:1126621/1‑231 (MQ=11)
                                                                                                                                                                                                   tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTCATGCGGAACCag                                           >  1:682947/1‑239 (MQ=255)
                                                                                                                                                                                                   tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAACCGGAACAGCAACAGGCTAATGCCGACCCAGAACAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCag                                           >  2:1019005/1‑239 (MQ=255)
                                                                                                                                                                                                    gCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCCCGAAAGCCGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGACGAAGCCGCTCTGGCCCGCGCCAACGCCAGCAAACGGCAGCCGCAACCGGccgatgtcgcgccac                                           >  2:1019286/1‑224 (MQ=14)
                                                                                                                                                                                                    gCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAACTGGAACAGCAAAAGGCTAATGCCGAGCCAGAACAACAGGTTGATCCGCACAAAGCCGCCGTCGAACCGGCTAATGCACGGGCCAAAGCCCCAAAACTGGCACAGCAACAGGACAATACCGAGCCaga                                          >  2:489878/1‑239 (MQ=11)
                                                                                                                                                                                                    gCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCAAGCAAGCTGGCACAGCAACAGGCTAATGCGGAGCAAGAAAAACAGGTCGATCCGCGCAAATCCGCCGTTGAAGACGCCATTGCCCGAGCCATCGCCCGTAAACTGGAGCAGCAACACGCTACTGCCGCGcccgc                                          >  2:102542/1‑236 (MQ=11)
                                                                                                                                                                                                       aaaGGGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCCCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGAGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga                                       <  1:114907/239‑1 (MQ=255)
                                                                                                                                                                                                       aaaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga                                       <  1:1127665/239‑1 (MQ=255)
                                                                                                                                                                                                       aaaGCGCGAAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGACGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga                                       <  1:1096628/239‑1 (MQ=255)
                                                                                                                                                                                                                 agcaggcacaacacgacgcaaaTGCGGAACCAGCAAAAGAGGCAGATCCGCGAAAAACCGCCGTCGA‑AGCCGCTAGTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAt                             <  2:1225708/219‑1 (MQ=14)
                                                                                                                                                                                                                     ggAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGc                                                                                                                                                                                             <  2:1188134/75‑1 (MQ=34)
                                                                                                                                                                                                                     ggAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGc                                                                                                                                                                                             >  1:1188134/1‑75 (MQ=34)
                                                                                                                                                                                                                            cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGGGCCAGAAGAACAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAATCGGGAACGGCAACAGGCTAATGCGGAGCCATGAGAACAGGTTGATCCTCGCAAAGc                  >  2:561952/1‑239 (MQ=11)
                                                                                                                                                                                                                            cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCaaa                    >  1:443351/1‑237 (MQ=255)
                                                                                                                                                                                                                            cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAACCGCAGTCGAAGCCGCTATTGCCCGAGCCAAAGCGGGCAAACGGGAGCAGCAACCGGCCAATGCGGAGCCAGACGACCAGGTTGATCCGCGCaaa                    >  1:666755/1‑237 (MQ=255)
                                                                                                                                                                                                                             aaCAGGATAAGAAGGAAGCAGAACCACAGGTCAACCGGCGAAAAGCCGCCGTCGA‑AGCAGCTAGTGCCGGGGCAAAAGCAGGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACACCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCt                 <  2:387238/239‑1 (MQ=14)
                                                                                                                                                                                                                                aGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAAAACAGGTCGAACCGCGCAAAGCCGCCGTCACCGCCGCTATTGCCCGCGCCAAAGCCCGCAAGCTGGAACAGCAACCGGCTACTGCGGAGGCACAAGAACAGGTAGCTGCGCGCTAtgctgc               >  2:219254/1‑238 (MQ=11)
                                                                                                                                                                                                                                 ggCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCCATTGCCCGAGCCAAAGCGCGCAAACGCGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGATGATCCGCGCCAAGCGGCCg             >  1:359663/1‑239 (MQ=255)
                                                                                                                                                                                                                                   ctaagccGGAATCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGACCAGCAACAGGCTAATGCGGAACCAGAACAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCg             <  2:390349/231‑1 (MQ=14)
                                                                                                                                                                                                                                     aaagCGGAACCAGAAGAACAGGGCGATCCGCGTAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGGACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGa         <  1:154430/236‑1 (MQ=255)
                                                                                                                                                                                                                                      aTGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGaa        >  1:1273107/1‑239 (MQ=255)
                                                                                                                                                                                                                                      aTGAGGACCCAGAAAACCAGGCTGATCCGCGAAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGaa        <  1:863998/239‑1 (MQ=17)
                                                                                                                                                                                                                                            aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc                                                                   >  1:11539/1‑174 (MQ=255)
                                                                                                                                                                                                                                            aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAAc                                                                   <  2:11539/174‑1 (MQ=255)
                                                                                                                                                                                                                                            aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCt  >  1:1087822/1‑239 (MQ=255)
                                                                                                                                                                                                                                            aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTAATCCGCGCAAAGCTGCCGTCGAAGCGGCt  >  1:226820/1‑239 (MQ=255)
                                                                                                                                                                                                                                            aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCACGAAGAACAGGTTGATCCGCGCAAAGCTGCCACCGACTCGGCt  >  1:1164041/1‑239 (MQ=255)
                                                                                                                                                                                                                                            aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACCGGAACAGCAACAGGCTACTGCGGATCCAGCAGCCCAGGTTGATCCGCGCCAACCTCACGACGAACCgga   >  2:1002726/1‑237 (MQ=14)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                              
AGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGA‑AGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCT  >  NC_000913/1708514‑1708988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A