Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F9 I0 R1
|
113 |
83.2 |
1840812 |
91.6% |
1686183 |
224.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,722,908 |
T→C |
12.7% |
L263P (CTC→CCC) |
ydhK → |
putative efflux protein (PET) component of YdhJK efflux pump |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,722,908 | 0 | T | C | 12.7%
| 241.2
/ 5.1
| 101 | L263P (CTC→CCC) | ydhK | putative efflux protein (PET) component of YdhJK efflux pump |
| Reads supporting (aligned to +/- strand): ref base T (50/36); new base C (3/11); total (53/48) |
| Fisher's exact test for biased strand distribution p-value = 1.85e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 101 total aligned reads displayed.
ACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGGTGTAGAT > NC_000913/1722680‑1723137
|
aCGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGTCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTCCGTATGACCAGAGTCATCTCCCGCCTGCGACCTATTGTGCCCACCTGGcc > 2:106551/1‑238 (MQ=255)
aCGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGACGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATAACGTATGACCAGTGTCCTCTCAAACCTCCGCCGTATGTTGCTCAACTGGcc > 1:875688/1‑238 (MQ=255)
aCGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATCCTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCTGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGGAATCTCCAGCCTGCGACGGATGTTCTTCAACTGGcc > 2:465619/1‑238 (MQ=255)
aCGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATCCGCTGCGCCACCAGCAATTACGTATGACCATGGTCATCTCCAGCCTGGGACGTTTGTGTCCCAACGGGcc > 2:563402/1‑238 (MQ=255)
cGCCCAATTTCGGGAACATGCCAGTTTCCCTGGGCAGCCTGAAAAAACCGGAGCCTTTCGGGCAGCCCATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCt < 1:392269/239‑1 (MQ=255)
tGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCCTCTCCAGCCTGCGCCGTATGTTGCTCAACAGGCCCCCaccacccagt > 2:198678/1‑235 (MQ=255)
gggAACATTCCAGTTTACTCCGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGt < 1:269152/238‑1 (MQ=255)
gCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGAATCCAGGCTTTCTGGAGCCCCTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCCCCAGCATTTACGTATGACCAGTGCCATCTCCAGCCTGCGCCGACTGTTGCTCAACTGGCCCTCACCACCCTGGGCCacaca > 1:495975/1‑238 (MQ=255)
gCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGATGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCCCCAGCCTGCGACGTATGTTGCTCATCTGTCCCTCACCGCCAGGTGCCACACg > 1:341570/1‑239 (MQ=255)
cAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGCCGTATGTTGCTCAACTGGCCCTCACCGCCAGGTCCCACACgag > 1:565753/1‑239 (MQ=255)
ttttcttgggCTGCTTGAAACAACCGATGCCATTCGTTCCGCCAATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCATGGTTTCTGGGGCCACTACCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGGGTCACCTCCAGCCTGCGACGTATGTTGCTCAACAGGCCCTCACCGCCAGGTGCCACACGAGaaa < 2:150754/231‑1 (MQ=255)
tttACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGTGTGATTGGGCAGATACTGACCATGAATTTTCTGCGTATCCAGGCTTTCTGGAGCCACTATCGCTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTAATCTCCAGCCTGCCACGGATCTAGCTCAACTGGCCCTCACCGCCAGGTGCCACCCGACaaa > 1:689095/1‑239 (MQ=255)
tttACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGaaa > 1:701223/1‑239 (MQ=255)
ttacgcgggacgCCAGAAACAACCGATGCCATTCGGGCAGCACATGAAGGGGTGATTGGGCAGATACTGCCCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACgaga < 1:154897/225‑1 (MQ=255)
ggcggcCTGAAACAACCGATGCCTTTTGGGCAGCAAATGAAGGGGGGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTAGCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGaa < 2:496483/239‑1 (MQ=255)
ggCCGCCGGAAACAACCGATGCCATTCGTGCCGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTACCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGaa < 1:369402/239‑1 (MQ=255)
ggCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGaa < 1:12567/239‑1 (MQ=255)
tcAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTCTGACCACTGTCCTTTCTATCCTCCGACGTATGTTGCCCACATGGCCCTTACCGCCAGGTGCCCCCCCGAAAATTCTCGaaa > 2:181683/2‑238 (MQ=255)
gCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGCTACTGACCATGAATTTGCTGCGTAACCAGGCTTTCGGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGCCATCTCCAGCCTGCGACGAATGTTGCTCAACTGGCCCTCACCTCCGGGTGCCCCACGAGAAATTCACGAAc > 1:393223/1‑239 (MQ=255)
ccTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACCCGAGAAATTCTCGAACAGt > 1:84851/1‑238 (MQ=255)
tGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACCCGAGAAATTCTCGAAAAGTTgtcgccgggctcg > 1:341363/1‑226 (MQ=255)
aTTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCCGGGGCCACACGAGAAATTCTCGAAAAGTTGCTGACGgcgcccccccg > 2:507408/1‑232 (MQ=255)
aTTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGTGGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCCCGCCAg > 2:718578/1‑239 (MQ=255)
tcaatagAAGGGGGGATTGGGCAGACACGGACAAGGAATGTGGAGAGGCTCAAGGCTGTCGGGGGCCGCGATCGTTTTCGGCAGAAAAACGGGG‑CCTTTAATGCGCGTCGCCACAAGGAAGTAGGTATGACGAAGGTCATATCGAGTCTGCGACTTATTCTCATCAACTGTCACTAAGCGCCAGGTGCCCCACGAGAAATTCTCGAACAGGTGCTGACGGCGCTCGCCAGTTCGCaaa < 2:689095/232‑1 (MQ=255)
gccttgaGGGGTGTTTTGGCAGATACTGCCCATGAATTTGCTGAGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCTTTAAGGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCaaa < 2:708905/230‑1 (MQ=255)
ccaggAAGGGGTGATTGGGCAGAACCTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGACCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACa < 1:198678/234‑1 (MQ=255)
acaTGAAGGGGTTATTTGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCaaa < 1:106551/236‑1 (MQ=255)
acaTGAAGGGGTGGTTGGGCAGATCCTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCaaa < 1:563402/236‑1 (MQ=255)
acaTGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAg < 1:150820/239‑1 (MQ=255)
ggtttttGGGCGGTTACTGCCCATGAAGTTGTTGCGTATCCAGGTTTTAGGGGGCCACTAGCGTTTTCGCCAGCAAAACGCTG‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGGGGCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTa < 2:474238/232‑1 (MQ=255)
ggTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACCCGAGAAATTCTCGAACAGTTGCTGACGGCGCCCCCCAGTTCGCAAAAAAATGTTTaa > 2:446155/1‑237 (MQ=255)
ggTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGGGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCCCTCGCCAGTTCCCAAAAAAATGTTTaa > 2:879465/1‑237 (MQ=255)
tGATTGGCCAGAATCTGACCATGAATTTGCCGCGTATCCAGGCTTTCTGGAGCCAATATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTacac < 1:446155/238‑1 (MQ=255)
tatttggcctacaCTGACCATGAATTTTCCGCGTTCCCCGGTTTTCTGGGGCCCCTATCGGTTTCGCCAGCCAAAC‑CGCGGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACAcc < 2:769465/226‑1 (MQ=255)
gATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACAcc > 1:60798/1‑238 (MQ=255)
gATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTCCGCAAACAGATGTTTACACCg > 1:769465/1‑239 (MQ=255)
gATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGCCGCTCGCCGGTTCGCAAACAGATGTTTACAcc > 1:411392/1‑238 (MQ=255)
aTTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGTTGCCCCACGAGAAATGTCCGAACAGTTGCTACCGCCGCTCGCCAGTTCGCCACCAAATGTTTACACCg > 1:850010/1‑238 (MQ=255)
aTTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCg > 1:168463/1‑238 (MQ=255)
tGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGACCAGTTGCTGACGGCGCCCGCCAGTTCGCGACAAGTTGTTTCCACCGTc > 1:909097/1‑238 (MQ=255)
gCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCAc > 1:13005/1‑239 (MQ=255)
aagttctgccctgtattttGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCCCCAGCAAACCGCTC‑GCCTTAAGGCCCTGCTCCACCAGCAATTCCGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACg < 2:403036/222‑1 (MQ=255)
gACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAACCAGATGTTTACACCGTCGCACGCATTATc > 1:618803/1‑238 (MQ=255)
aCCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGAATTATCg > 1:312913/1‑238 (MQ=255)
aCCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCCCGCCAGTTCGAAAAAAGATGTTTAAACCGTCGCCCGTATTATCg > 2:838608/1‑238 (MQ=255)
aCCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGAATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGTTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCACACAGCTGTTTACACCGCCCAACGcattatag > 1:267193/1‑236 (MQ=255)
tgctgcGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCCAACAGCTGTTTACACCGGCGCACGTATTATCGCCCCGCTCCg > 1:371462/1‑238 (MQ=255)
tgctgcGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTa > 1:133731/1‑208 (MQ=255)
aTCCAGGCTTTCTGGAGCCATCATCGTTTTCGCCAGCAAAATGCGC‑GCCTTAATGCGCGTCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCa < 1:352736/238‑1 (MQ=255)
ttCTGGGGCCTCTTTCGTTTTCCCCAGCAAAACCCGG‑CCCTTAATGCGCTGCCCCCCCAGCAATTACGTATGACCAGTTTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCCCCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGa < 2:60798/239‑1 (MQ=255)
ttCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCg > 1:673207/1‑238 (MQ=255)
tCTGGAGCCACTATCGTTTTCGCCAGCAAAATGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATAACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGGGCCACACGAGAAATTCTCGAACAGTTGCTGACGACGCTCCCCAGTTCGCAAACAGAGCTTTACACCGTCGACCGAATTATCCCCCCGCACCGCCCGACCAACTTCCCCgc > 2:352736/1‑237 (MQ=255)
gCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGaa < 2:761083/143‑1 (MQ=255)
gCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGaa > 1:761083/1‑143 (MQ=255)
cTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCGTCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCCTCGCCCGTATTATCGCCCCGCCCCCCCCCACCAACGCCCCCGACAATCGGCAc > 2:365663/1‑238 (MQ=255)
cTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGCGCCACACGAGCAATTCTCGAACAGTTGCTGACGGCGCTCGCCACTTCGCAAACAGATGTTTACACCTGCGCACGTATAAACCCCCCCCCACCCCCCACCAACCTCCCCCCCTATCggaaag > 2:297569/1‑235 (MQ=255)
ttCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCCTCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACCGGCCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGAATTATCTCCCCCTTACACCCGCCCAACGTCGCCTCCTTTCGCCACGGCGCCtg > 1:795273/1‑237 (MQ=255)
cGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCCCTCGCCAGTTCGCAAACAGATGTTTACACCTTCGCCCGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGCCCATCGGCACGTCCCCTTCTg > 2:135460/1‑239 (MQ=255)
aaacCGCGC‑GCCTTAATGGGTTCCTCCACCGGAAATTTCGTGTGACCAGGTTCATCTCCAGCCGGGGACGTATGTTGCTCAACTGGCCCTCCCCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACCTCGTCTCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAg < 2:372741/236‑1 (MQ=255)
aaaaCGCGC‑GCCTTAATGCGCTGCCCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGa < 1:879465/239‑1 (MQ=255)
caaaccccccctttAATGCCCTGCCCCCACACCAATTACGTAACACCTGGTTCCTCTCCCGCCCGCGGCCTAGTTTGCTCAACTGGCCCCCCCCCCCAGGTGCCACACGAGAAATTCCCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGa < 2:705477/227‑1 (MQ=255)
c‑gcCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAGCAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGCCCAACGTCCCCGACTATCGGCACGTCCCCCTCTGGCAGCGCCCCCGTTa > 2:602336/1‑239 (MQ=255)
cctttAATGCGCTCCTCCACCCACAATTACGTATGCCCAGTGTCATCTCCCGCCTGGGACGTATGTGGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACCCCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTAt < 2:13005/236‑1 (MQ=255)
taTGGGCTGCTTCGACAACAATTCCGTATGCCAAGGGTCCTCCCCAGCCTGCCGCTTATGTTGCTCAACTGGCCCACCCCGCCAGGTGCCACCCGAGAAATTCTGGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTg < 2:531701/238‑1 (MQ=255)
aatcccctgtcccaccaccaATTCGCGATGGCCAGTTTCATCTCCACCCTCCGACGAATGTTGCCCAACTGGCCCTCACCGCCAGTGGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTAttttgg < 2:673207/228‑3 (MQ=255)
gctCCACCCGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCCCCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCttt < 1:507408/239‑1 (MQ=255)
ctCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGCCTACGTTATTTTTGCCGCCTTTa > 1:621442/1‑239 (MQ=255)
aaggaacaccGTATGACCGGTGTCATCCCCAGCCTGCGACGTAGTTTTCCCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCGGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACGCCGTCGAACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCa < 2:899504/230‑1 (MQ=255)
cAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAag < 1:897512/239‑1 (MQ=255)
aaTTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGc < 2:398695/139‑1 (MQ=255)
aaTTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGc > 1:398695/1‑139 (MQ=255)
tACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGCTATTTTTGCCGCCCTTATCTGCAAcgtag > 1:587130/1‑238 (MQ=255)
tcGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTc < 1:917910/238‑1 (MQ=255)
ccGTATGACCAGTGCCATCTCCAGCCTGCGACTGATTTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTc < 1:134304/238‑1 (MQ=255)
acctttgcccAGTGTCATCTACAGCCGTCGACTGATGTTGCCCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTc < 1:365663/231‑1 (MQ=255)
cGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCCCCGACAATCGCCCCGTCCCCTTCTGCCCCCGCCCACGTTTTTTTTGCCGCCTTTATCCTCAAAGTAGTCa > 2:395943/1‑239 (MQ=255)
ggaTGACCATGGTCATCCCCGGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTAGCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAg < 1:536119/237‑1 (MQ=255)
tATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAACCAGATGTTTACACCGTCGCACGTCTTATCGCCCCGCTACGCCCGACCAACGTCCCCGACTATCGGACCGTCCACTTCCGCCAGCGACTACGTTATTTTTTCCGCCTTTATCTGCAAAGAAGCCAgg > 2:81095/1‑239 (MQ=255)
tGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGCCTATCGGCACGTCGCCTTCTGGCAGCGACCACGGTATTTTTGCCGCCTTTATCTGCAAAGGAGTGAGGaa > 2:63031/1‑239 (MQ=255)
ccAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGAAGCGACTCAGGTATTTTTGCCGCATTTCTCTGCAACGTCATCAGGCAtt > 1:820474/1‑238 (MQ=255)
tgtCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCGGCGACTACGTTATTTTTGCCGCCTTTATCTCCAAATTAATCAgcgcgcctctt > 1:899504/1‑229 (MQ=255)
gtCTTCCCCAGCTTGCGACGTTTGTTGCCCACCCGGCCCTCCCGCCCAGGTCCCACACGGAAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATc < 2:312913/238‑1 (MQ=255)
cATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACCCGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGt < 1:465619/238‑1 (MQ=255)
cAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGCCCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCACCGGCTACGTTATTTTTTCCGCCTTTATCTGCAAAGTAGCCAGGAAttcaaacgtcggaaaa > 2:249360/1‑225 (MQ=255)
cgccctggctgTATGTTGCCCAACTGGCCCTCCCCGCCAGGTGCCACCCGCGAAATTCTCGAACTGTTGCTGCCGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCCTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAg < 2:371462/229‑1 (MQ=255)
cacccgggcccgttGTTGCTCAACTGGCCCTCACCGCCAGGTGCCCCACGGGAAATTCGCCAAACGTTCCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGCTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAg < 2:587130/226‑1 (MQ=255)
cacccgctgacgttgtgGCTCAACGGGCCCCCCCCGCCATCGGCCACCCAAGAAATTGGCGATCAGTTGTCGACGGCCGTCGCCTGTTCCAAAACATAGTGTTACGCCGCCGCACTTATTAACGACACGCTACGCCCGACCAACGTCGCCCGCTATCGGAACGTCGCCTTCAGGCAGCGTCTACGTGATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCTTCTGCAAAg < 2:495975/226‑1 (MQ=255)
aGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGCCTATCGGCCCGTCGCCTTCTGGCACCGACTCCGTTATTTTTGCCGCCTTTATCTGCAAAGCAGTCAGGAATTACATAGTCTGCaaac > 2:174445/1‑238 (MQ=255)
aGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCaaa > 1:473635/1‑238 (MQ=255)
aaggccagttATGTTGTCCAATGGGCCCTCCCCGCCAGGTGCCACAGGAGAAATTCTCGAACAGTTGCTGGCGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCg < 2:383046/230‑1 (MQ=255)
cTGCGCAGTATGTTGCACAACGGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCgg < 1:395943/239‑1 (MQ=255)
cTGCGACGTGTTGTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGACCAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAg < 2:565753/236‑1 (MQ=255)
tGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACAACGTTATTTTTGCCGCCTTTATCTGCAAATTAGTCAGGAATTACATCGTCTGCAAAGCggg > 1:505510/1‑238 (MQ=255)
gCGACGTATGGTGCCCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGgtg < 1:7867/239‑1 (MQ=255)
gggaTGTTGCCCAACTGGCCCTCACCGCCAGGTGCCACACGAAAAATTCTCGAACAGTTGGTTACGGCCCTCGGCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGGTGTAg < 1:81095/235‑1 (MQ=255)
cGTATTTTGCTCAAATGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGGTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTTCGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGGTGTAg < 1:369779/238‑1 (MQ=255)
ttATGTTGCCAAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGGTGTAgat < 1:18482/238‑1 (MQ=255)
tgtatttGCCCAACTGGCCCTCACCGACAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGGTGTAgat < 1:249360/234‑1 (MQ=255)
tGCTCAACTGGCCCTCACCGCTAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAg > 1:456886/1‑223 (MQ=255)
tGCCCAACTGGCCCTCACCGCTAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAg < 2:456886/223‑1 (MQ=255)
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ACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGC‑GCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGGTGTAGAT > NC_000913/1722680‑1723137
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
