Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F9 I0 R1
|
131 |
136.1 |
2723430 |
98.1% |
2671684 |
229.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
989,945 |
A→G |
15.5% |
S138P (TCA→CCA) |
pncB ← |
nicotinate phosphoribosyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 989,945 | 0 | A | G | 15.5%
| 140.3
/ 2.5
| 80 | S138P (TCA→CCA) | pncB | nicotinate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (28/37); new base G (5/9); total (34/46) |
| Fisher's exact test for biased strand distribution p-value = 7.68e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGA > NC_000913/989711‑990183
|
cctccGGCGTGAGGGAAAGCCGCCGCGCCAGATCGTAGTTTCTGGTTCCCACAAACCAGGATTCCTGTAGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGagcga < 2:392466/235‑1 (MQ=255)
ccATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGagcga < 1:106280/239‑1 (MQ=255)
ccATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGagcga < 2:848897/239‑1 (MQ=255)
ccATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGagcga < 2:1349062/239‑1 (MQ=255)
aTCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTTAA‑GCCGAGAAGTCGGCTAATTTGCTTTTCCGCGTGTCGGGGGGTTTGG‑CCAC‑GTCGGCCCG‑CGGGGaggggta > 1:386035/1‑234 (MQ=255)
aTCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGGGAAGACGACCAATTTGCTTTTCAGCGCGTCGAGGGGTTTCG‑CAAC‑GTCGGCCGC‑CGGTGggcgat‑a > 1:884048/1‑239 (MQ=255)
cGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGCTGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGCGAAGTCGGACAATTTTTTTTTCAGCGTGTGCGGGGCTTGCG‑CAAC‑ATCCGCCTG‑CGGTGggcggt‑a‑tcgat > 1:531185/1‑239 (MQ=255)
cGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGagcgat‑a‑gcga < 1:1268279/238‑1 (MQ=255)
gTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATg < 2:1184633/239‑1 (MQ=255)
gTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATg < 1:660447/239‑1 (MQ=255)
tGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCCCGAAGTTGACCAATTTTCTTTTCAGCGTGTCGCGGGCTTGCG‑CAAC‑CCCGGCGCG‑CGGTGggggat‑a‑gcgtagt > 1:261511/1‑235 (MQ=255)
gAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCa < 1:988885/238‑1 (MQ=255)
aGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGCGAAGTCGACTAATTTGCTTTTCAGCGGGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGGGAGCGAT‑A‑GCGATGTACCATTTCTCTGCTAAACGCCCGCaaa > 2:1103907/1‑239 (MQ=255)
ggTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTTAC‑CACGAGAAGGACAATAATTTGCTTTCCAGCGTGCCGCAGGCTTGCG‑CCAC‑GCCGCCCCG‑CGGTGTGCGGT‑A‑GCGGTGTCACATTTTACTGATAACCGCCAGCaacgacact > 2:7315/1‑231 (MQ=255)
gCCCACAACCCAGGATTCCTGTGGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAAAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTcc < 1:499147/238‑1 (MQ=255)
gCCAACAAACCAGGATCCCGGTGGAAGCCGCTTAACGATGTTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGAAATATCAAGCCCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTCCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTcc < 2:587505/238‑1 (MQ=255)
cccACAAACCAGGTTTCCTGTTGAGGACGCTTAAGGATGTTTTCTTGTACTTCGCGAGAAAAACGGCG‑AGGGGGGCAAAAATCCA‑TCAGAGGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCGGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑AAAC‑GTCGGCCGG‑GGGTGAGCGAT‑A‑GCGATGTACCATTTCACGGATAACCGCCAGCAAAGGAACTTCCCa < 2:238203/239‑1 (MQ=255)
tCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTTCTTTCCAGCGTGTCGCGGGCTTGCG‑CAAC‑GTCGGCCCG‑CGGGGAGCGAT‑A‑GCGATGTACCCTTTTCCTGTCAACCGCCAGGAAAGGAAATTCCCCGAGGAGGACTTCAc > 2:908378/1‑238 (MQ=255)
tCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAA‑GCCGCGAAGGCGAACAATTTTCTTTTCAGGGTGTCGAGGGCTTTCG‑CCAC‑GTCGGGCTG‑CGGGGGGCGGT‑A‑GCGATGTACCCTTTCACTGATAAACGCCAGCAAAGGAAATTCCCCGAAGAAGACtttcc > 2:1191028/1‑235 (MQ=255)
tGCAGCCGCTTAACGATGGTTTCTTGTCCTTCGCGAAAAAAACGGCG‑AGGGGTGCCAAAATCCA‑TAAGAGGGAGGCGCACCATAACAAGCCGGGCGGTTACC‑GCGGAGAAGTCGATTAATTTGCTTCCCGGCGTGTCGAGGGTTTGCG‑CAAC‑GTCGGCCTG‑GGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACg < 2:26679/238‑1 (MQ=255)
tGCAGACGCTTAACGATGTTTTCTTGTACTGCGAAAAAAAAACGGCG‑CCGGGTGCCAAAACCGA‑TCAGATGGAAGCGGGACATATCAAGCCCGGCGGTTAAC‑GCCGAGACGTCGACTATTTTGCTTCCGAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGGGCGAT‑A‑GCGATGTCCCATTTCACGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACgg < 2:82009/239‑1 (MQ=255)
gCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGGTTAC‑GCCGAGCAAGCGACTAATTTGCTTTCCAGCGGGGCGGGGGGCTGCG‑GAAC‑GGCGGCCTG‑CGGTGAGCGATAA‑GCAGTG‑ACCCTTTTACTGATAACCGCCAGCAAAGGGACTTCCCCGCGGATggatttcccccaccg > 2:195995/1‑224 (MQ=255)
gCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATACCAAGACCGGCGGTTAAA‑GCCCAGAAGTCGACCAATTTGTTTTCCAGCGGGTTGGGGGGTTGCGACAAC‑‑TCGGCCTC‑CGGGGGGCGAT‑A‑GCAGTGTGCCATTTTCCTGGTAAACGCCAGCAAAGGAACCTCCCAGAGGACGGCTTCCcaccactg > 2:363273/1‑236 (MQ=255)
gataacggttGGTTTTTTGATCTTCG‑GAAAAAAACCGTGCACGGGTGCAAAAATCCA‑TAAGATGAAGTCGCAAAATAGCAAGACGGGC‑GTTAACGGCCGAGAGGCCGACTATTTGGCTTTCCAGCGTGTCAGGGGCTTGCG‑AATC‑GTCGGCCTG‑CGGTGGGCATT‑G‑GCAATGTCCCTTTCCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑Ctt < 2:1125025/230‑1 (MQ=255)
aaCGATGGTTTTTTGTACTTGGAGAAAAAAACGGCG‑AGGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGCCCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTGGAGGGCTTGCG‑AAAC‑GTCGGCCTG‑GGGTGAGCGAT‑A‑GCGATGTCCCTTTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAAc < 1:557080/239‑1 (MQ=255)
ggTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGGGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAA‑GGCGGCCTG‑CGGTGAGCGGT‑A‑GCGATGTACCATTTTACTGATAACCGCCAGCAAAGGAACTTCCCCGAGGATGACTTCACGCCCCGGGCCG‑CTTAAACGAata > 1:641121/1‑238 (MQ=255)
ggTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAAACGACTAAATTGCCTTTCAACCGGTCGAGGGGTTGCG‑CACC‑GTCGGCCCG‑CGGGGAGGGCT‑A‑GAGGTGGACCCTTTTTCTGATAACCGGCCGAAAAGGGACCTCCCAGCGGGAGAATTTACGCCACGGGGCG‑CTTAAAAGAata > 2:510409/1‑238 (MQ=255)
tCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTTCTTTTCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGGTGTACCATTTCACCTATAACCCCCAGCAAAGGAACTTTCCCGAGGGTGACCTCACGCCACGGGCCG‑CTTTAACCAAAATccc > 2:455202/1‑237 (MQ=255)
tCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCCAGAAGTCGACTAATTTGCTTTCCAGCCGGTCGAGGGCTTGCG‑CAAC‑CTCGGCCCG‑CGGTGGGCGCA‑A‑ACGATGTACCCTTTTCATGTTAACCCCCAGCCAAAGAACTTCCCCCAGGATTACTTCCCCCCACGGGCCC‑CTTAAACgccaacccc > 2:625725/1‑230 (MQ=255)
cTTGTACTGCGCGAAAAAAACGGCG‑AGGGGTGCAAAAATCCA‑TCAGAGGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTCCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTGGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGc < 1:1103907/239‑1 (MQ=255)
tgcgagagaAAAACGGCG‑A‑GGGGGCACAAACCCAGACAGGTGAACGCGGGAAATATCAAGCCGGGGGGTAACC‑GCCGAGAGGCCGTCTAATTTTCTTTCCAGGGTGTCGAGGGTTTGCG‑AACC‑GTCGGCCGG‑GGGTGGGCGAT‑G‑GCGATGTACCTTTTCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCAt < 2:733590/234‑1 (MQ=255)
tccgggaaaaaaaCGGCG‑CCGGGTGCCAAAATCTA‑TCAGATGGAAGCGCGACATATCAAGACGGGCGGTAAGC‑GCCGAAATGTCGACAAATTCTCTTGCCAGCGTGTCGAGGGCTTCCG‑CAAC‑GGCGGCCGG‑CGGTGAGCGAT‑A‑GCGATGTCCCATTCCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCAt < 2:47946/231‑1 (MQ=255)
tccgcgAAAAAACCGGCG‑CGGGGGGCCAAAGCCCT‑ACCGAGGGAACCGCGAAATAACAAGCCCGGCGGGTACC‑CCCTAGATTCCGACAAATTTCTTTTCCAGCGTGGCGAGGGTTGGCC‑CACC‑GTGCGCCTG‑CGGTGGGTGAT‑A‑GCGATGTCCTTTTCCACGGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCAt < 2:252479/237‑1 (MQ=255)
cgcgGGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCCAGAAGGTGGCTAATTTGCTTTCCAGCGGGTGGAGGGCTTGCG‑CCAC‑GGCGGCCCT‑CGGGGGGCGGT‑ATGGCTTGGACC‑TTTTACTGATAAACGCCCGCCAAAGAACGTCACCAAGGGTGGCATTCCGCCACCGGCCGCCTTaaaaaaaaaacacgcttcccata > 2:754975/1‑219 (MQ=255)
cgcgAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGGGGGGTTGCG‑CAAC‑GTCGGCCCG‑CGGGGAGCGCG‑A‑GCGATGGACCATTTTCCTGATAACCCCCCGCAAAGGGACTTTCCCGAGGGTGACTTCACGCCCCCGGCCG‑CTTAAAACAATAACCacccttccctct > 2:1294113/1‑228 (MQ=255)
cgcgAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGGCGACTAATTTGCTTTCCCGCGTGTCGGGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGGGAGCGAT‑A‑GCGATGTACCATTTTACTGATAAACGCCAGCAAAGGAACTTCCCCGAGGATGACTTCACGCCCCGGGCCG‑CTTAAACGAATATCCAACTTGCCCTTa > 1:1160199/1‑239 (MQ=255)
cgcgAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAA‑GCCGAGAAGTCGACTAATTTGGTTTTCAGCGTGTCCGGGGCGTGCG‑CCAC‑GTCGGGCTG‑CGGTTAGCGAG‑A‑GCGATGTACCATTTTAATGATAACACCCAGCCAAGGAACTTCCCAGAGGATGGCGTTACGCCACGGGCCG‑CTTAAACGAAAAACCAACCTGCCagtt > 2:291933/1‑236 (MQ=255)
cgcgAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGCTAAC‑GCCGCGAAATCGGCTAAATTTCTTTCCCACGTGTCGAGGGTTTGCG‑CAAC‑GCCCGCCTT‑CGGTGAGCGAC‑A‑GCGCTGGACCATTTGCCTGATAACCGCCAGCATCAGAACCTCCCAGAGGGTGACTTCCTCCCCCAGGCCG‑CCTTCACGAATACTGACCCTGCCATTa > 2:1232069/1‑239 (MQ=255)
aaaaacCGGCG‑ACGGGTGCCAAAATCCA‑TAAGATGGAGGCGCGAATTACAAAGGCGGGCGGTTAAC‑GCCGAAAAGTCGACTAATTTGTTTTCCAGCGTGCGGAGGGCGTGCG‑AAAC‑GCCGGTGGG‑CGGTGAGCAAT‑A‑GCGATGTCCCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGt < 2:641121/237‑1 (MQ=255)
aaaacCGGCG‑GCGGGGGCAAAAACCCA‑GCAAGTGGAGGCGCGAAAAATCAAGCCGGGCGTTTACC‑GCCGAAAGGTCGACTAATTTGCTTTCCAGGGTGTGGAGGCTTTGCG‑AAAC‑GTCGGCCGG‑GGGGGAGCGAT‑G‑GCGTGGTACCATTTCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTg < 2:71015/239‑1 (MQ=255)
aaaaCGGCG‑ACGGGTGCCAAAACCCA‑TCAGAGGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTgg < 1:455202/239‑1 (MQ=255)
ggcg‑gcGGGTGCCAAAATCCA‑TCAGAAGGAAGCGCGACATAACAAGACCGGGGGTTAAC‑GCGGAGAAGCCGACTAATTTGCTTCCCAGCGGGGCGAGGGCTGGCG‑CACC‑GTCGGCCGG‑CGGTGAGCGAT‑A‑GCGATGTACCATTCCACGAATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACg < 2:1190240/239‑1 (MQ=255)
gcg‑gcgGTTGCAAAAACCAC‑TAAGAGGGAGCCGCGACATAACAAGCCGGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTTCTTTCCAGCGTGCCGAGGTTTTGCG‑CACC‑GTGGGCCTG‑CGGTGAGCGTG‑A‑GCGATGTCCTATTTCATTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATAGCCAGCTTGCCATTATCGTTGGACACg < 2:1315994/238‑1 (MQ=255)
gagggggGCAAAAACCCA‑TCAGAGGGAAGGGAAACATACCAGGCCCGGGTGTTACC‑GCCGAAAAGCCGATTAATTTGCTTTCCGGGGTGTCGAGGGTTTGCG‑AACG‑GTGGGCCTG‑CGGTGGGAGTT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGt < 2:731928/235‑1 (MQ=255)
ccAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGCGTTGAGGGGTTGCG‑CCAC‑GTCGGCCCG‑CGGTGAGCGAT‑A‑ACGATGTACCATTTTACTGATAACAGCCAGCAAAGGCACTTCCCACAGGATGACTTCACCCCCCGGGCCG‑CTTAAACCAATATCCAGCCTGCCCTTTTCGTTGGACAACGGGAC‑Ttttt > 2:767963/1‑238 (MQ=255)
aaaaaCCCA‑TGAGATGGAAGCGGGACATATCAAGACCGGCGTTTACC‑GCCGAGAAGTCGACTAATTTGCTTCCCAGCGTGTCGAGGGCTTGCG‑AAAC‑GTCGGCCTG‑GGGTGAGCGAT‑A‑GCGATGTACCTTTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTc < 2:386035/237‑1 (MQ=255)
tCCA‑TCAGATGGAAGCGCGACAAAGCACGCCCGGTGTTTACC‑GCCGAGAAGTCGACTATTTTGCTTTCCGGCGTGCCGAGGGCTTGCG‑CACC‑GTCGGCCTG‑CGGTGAGCTAT‑A‑GCGATGTCCCATTCCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGtt < 2:150269/239‑1 (MQ=255)
ccA‑TCAGATGGAAGCGCAACTTATCAGGCCCGGCGGTTACC‑GCCGAGAAGTCGCTTATTTTGCTTCCCGGGGTGTGGAGGGCTGGCG‑CAAC‑GCCGGCCGG‑CGGGGAGCGAT‑G‑GCGAGGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTa < 2:1160199/239‑1 (MQ=255)
cA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCCAGAAGTCGAATAATTTGCTTTTCAGCGTGGCGAGGGGTTGCG‑CCAC‑GTCGGCCCG‑CGGGGAGGGGT‑A‑GCGATGTACCATTTCCATGATAACCCCCCGCACAGGGAATTTCCCGAGGATGGCTTTACGCCACGGGCCC‑CCTAAACGAAAATCCAGCTTGCCCTTCTCGTTGGACACGGCGCC‑TTTTTCCGGGGTac > 2:1287093/1‑238 (MQ=255)
ggAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGGTTGCG‑CAAC‑GGCGGCCTG‑CGGTGAGCGGT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGGTGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCCTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAACGGa > 1:1022130/1‑237 (MQ=255)
aacgcggcaCATAGCAAGCCCGGCGTTAACC‑GCCGAGAAGGCGACTAATTTGCTTCCCGGGGGGTCGGGGGCTTGCG‑CAAC‑GTCGGCCGG‑GGGTGAGCGAT‑A‑GCGATGTACCATTCCCCTGATACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGaa < 2:884048/229‑1 (MQ=255)
aaGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAATCGACTAATTTGCTTTTCCGCGGGTCGAGGGCCTGCG‑CAAC‑GGCGGCCTG‑CGGGGGGCGGG‑A‑ACGATGTACCCTTTTACCGATAACCGCCCGCCAAGGAAATTCCCCCAGGATGACTTCACGCCACGGGCCG‑CGTAAACGAAAATCCCCATTGCCCTTATCTGTGGACACAGGGGC‑ATTGTCCGGGGTTAAGCGGGAcac > 2:289260/1‑237 (MQ=255)
gcacgatcagggcgggtggTTAAC‑GGCGCGAACGCGACTAATCTTCTTTCCAGCGTGGCGCGGGCTTCCG‑AAAC‑GCCGGGCTG‑CGGTGAGCGAG‑A‑GCTATGTACCTTCTCTCTGATACCCGCCGGCAAAGGAACTTCCCAGAGGATGGCTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:306707/222‑1 (MQ=255)
gaaagctcacggcgggcggTTAGC‑GCGGAGAAGTCGCCTAATTTGCTTTCCGGCGTGTCGAGGGCTGGCG‑AAAC‑GCCGTCCTG‑CGTGGAGGAAT‑G‑GCGAAGAACCAGTTCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:531185/225‑1 (MQ=255)
gACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCGGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGTTGAGCGAT‑A‑GCGATGTACCATTTCACGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 1:1175243/239‑1 (MQ=255)
caatatCAGGCCCGGGGGTTAAC‑GCCGAGAAGTCGACAAATTTGTTTCCCAGCGTGTGGGGGGTTGGCG‑CAAC‑GTCGCCCGG‑GGGTGAGCGAG‑A‑GCGATGTACCATTTCACTGAAACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:139925/236‑1 (MQ=255)
acaaaacAAGACCGGGGGTTAAC‑GCCGAGAAGTAGCTTAATTTGTTTCCCAGCGTGGCGAGGGCTTGCG‑AAAC‑GCGGGCTGG‑GGGTGGGCGAT‑A‑GCGATGTCCCATTCCACTGATACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:314892/232‑1 (MQ=255)
agaatagcgccggggggTTAAC‑GCGGAGATGTAAACGATTTCGCTTTCCGGCGTGGGGGGTGCTTGCG‑CAGC‑GTCGGCCGG‑CGGTGGCGGAT‑A‑GTGATGTACAATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:897168/222‑1 (MQ=255)
atCAAGACCAGCGCTTAAG‑CCCAAAAACTCGTGCAATTTGTTCTCCTGCGTGACGAGGGCTGGCA‑CATC‑GACAGCTTG‑CGGTAAGTCAT‑A‑AGGTTGTACTAATCCCCGAAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCAAGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGCGTTAAAGCAGAACTCGCGTAACCAGt < 2:1220753/239‑1 (MQ=255)
aaaGCCCGGCGGTTAAC‑GCGGAGAAGTGGACTAATTTGCTTTGCAGCGTGTGGAGGGTTTGCG‑CAAC‑GTGGCCCTG‑CGGTGAGGAAT‑A‑GCGTTGTACAATTTCATGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTa < 1:980556/238‑1 (MQ=255)
cggcggTTTAC‑GCCGAGAAGTCGACTAATTTTCTTTTCAGCGTGTCGAGGGCTTGCG‑CAAC‑GGCGGCCTG‑CGGGGAGCGAT‑A‑GCGATGTACCATTTTACTGATAACCGCCCGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGGGAC‑TTGTTCCGGGTTAAAACGGGACTCGCGCAACCCGTTAAGATAg > 2:120841/1‑239 (MQ=255)
gggggTTAAC‑GCGGAGAGGTCGACAAATTTGCTTTCCAGCGTGTGGAGGGCTTGCT‑CAAC‑GTCGGCCGG‑CGGTGGGGTAT‑G‑GCGATGTACATTTTCACGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGGTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:414600/236‑1 (MQ=255)
ggcgtTTACC‑GCCGAAAAGTCGACTAATTTGCTTTCCGGCGTGTCGGGGGCTTGCG‑AAGC‑GGGGCCCTG‑CGGTGAGCGAT‑A‑GCGATTTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:448960/239‑1 (MQ=255)
ggcggTTAAC‑GCCGAGACGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCGG‑GGGGGAGCGAT‑A‑GCGATGTCCCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:1287093/239‑1 (MQ=255)
gcggTTACC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGTTTGCG‑CAAC‑GCCGGCCTG‑GGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:173858/238‑1 (MQ=255)
gcggTTAAC‑GCCGGGAAGTCGACTAATTTTCTTTCCAGCGGGTCGAGGGCTTGCG‑CAAC‑CTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGGACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCCGAGGGTGACTTCACGCCCCGGGCCG‑CTTAAACGAATATTCCGCTTGCCATTATCGTTTGACACCGGGAC‑TTGTTCCGGGGTAAAACGGGAATCGCGGCACCAGTTAAGATAATc > 2:1256634/1‑239 (MQ=255)
gcggTTAAA‑GCCGCGAAGTCGCCTAAATTTCTTTCCAGCGGGTCGAGGGGTTGCG‑CAAC‑GCCGGCCCG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCAATGATAACCGCCAGCAAAGGAAATTCCCCCAGGACGCCTTCACGCCCCGGGCCG‑CTTAAACGAACATCCCACTTGCCATTATCCTTGGGCCCGGTGACTTTTTTCTGGGTAAAAGC‑GCACCCGCGTAACCCGTTTAGATa > 2:1074776/1‑236 (MQ=255)
tatggCCGAGAAGCCGATTATTTGCCTTTCCAGCGGGTCG‑GGGGTTGGC‑CAACAGTCGGCTGG‑CGGGGAGGCAG‑A‑GCGATGTCCCATTTCACTTATAGCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCt < 2:373708/235‑1 (MQ=255)
agaAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTaaagaaa > 2:335453/1‑239 (MQ=255)
tCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAggcag > 1:406275/1‑239 (MQ=255)
aTTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGaa > 1:305231/1‑239 (MQ=255)
aTTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGaa > 1:197312/1‑239 (MQ=255)
tGCTTTCCAGCGTGTCGAGGGCTTGCG‑CACC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGc < 1:1276399/239‑1 (MQ=255)
tttCCAGCGTGTCGAGGGCTTGCG‑CACC‑GTCGGCCTG‑CGGTGAGCGAT‑G‑GAGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCa < 1:195995/238‑1 (MQ=255)
tttCCACGGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCGG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCa < 1:998206/238‑1 (MQ=255)
ttccaaGCGTGTGGGGGGTTTGCG‑CAAC‑GTCGGCCTG‑GGGTGAGCGAT‑A‑GCGATTTACGATTTCCCTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCAc < 2:1178273/234‑1 (MQ=255)
cAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGat > 2:1109229/1‑239 (MQ=255)
aagggtgtggtgcgtttGCG‑AAGC‑GGCGGCCAG‑CGGTGAGCAAT‑A‑GCGATGTCCAATGTCGCGGATACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGat < 2:1111395/224‑1 (MQ=255)
cGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCa > 2:1102492/1‑189 (MQ=255)
cGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCAAT‑A‑GCGATGTACCATTTCACTAATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCa < 1:1102492/189‑1 (MQ=255)
cGAGGGTTCGCG‑CAAC‑G‑CGGGCTGTCGGGGAGCAAT‑A‑GCAATTTCCCATTTCACTGATACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATtcatca < 2:214580/239‑1 (MQ=255)
ttGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCa > 1:183358/1‑239 (MQ=255)
tGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAg > 2:371897/1‑239 (MQ=255)
gcg‑cAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAg > 2:468883/1‑238 (MQ=255)
gcg‑cAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAg > 1:34529/1‑238 (MQ=255)
gcg‑cAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAg > 1:387831/1‑238 (MQ=255)
cTG‑GGGTGGGCGAG‑A‑GCAATGTACCATTCCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGtgctgc < 1:668126/238‑1 (MQ=255)
cTG‑CGGTGAGCGAT‑A‑GGGATTTCCCATTTCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCa < 1:967658/239‑1 (MQ=255)
gTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCCTCg > 2:1247007/1‑237 (MQ=255)
agcgat‑a‑gcgatGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGa > 1:494754/1‑239 (MQ=255)
agcgat‑a‑gcgatGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGa > 2:605361/1‑239 (MQ=255)
agcgat‑a‑gcgatGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGa > 2:565973/1‑239 (MQ=255)
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CCATCGGCGTGAGGGAAAGCCGACGCGCCAGATCGTAGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGGTTTCTTGTACTTCGCGAGAAAAACGGCG‑ACGGGTGCCAAAATCCA‑TCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAC‑GCCGAGAAGTCGACTAATTTGCTTTCCAGCGTGTCGAGGGCTTGCG‑CAAC‑GTCGGCCTG‑CGGTGAGCGAT‑A‑GCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCG‑CTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGAC‑TTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGA > NC_000913/989711‑990183
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
