Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F9 I0 R1
|
131 |
136.1 |
2723430 |
98.1% |
2671684 |
229.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,228,214 |
T→G |
10.3% |
V162G (GTG→GGG) |
yjbB → |
putative Na+/Pi‑cotransporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,228,214 | 0 | T | G | 10.3%
| 399.6
/ 2.9
| 139 | V162G (GTG→GGG) | yjbB | putative Na+/Pi‑cotransporter |
| Reads supporting (aligned to +/- strand): ref base T (67/53); new base G (16/2); total (84/55) |
| Fisher's exact test for biased strand distribution p-value = 8.67e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 141 total aligned reads displayed.
CTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATGCCGCAGCCCGCCGTGTCGC > NC_000913/4227976‑4228445
|
ttGGTCATTGTGCTGGGTGCAGATGTCGTGACGGCGCGAATGGCGCGTATTCTGCCCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGAGTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGt < 2:937610/238‑1 (MQ=255)
ctGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGt < 1:1073484/239‑1 (MQ=255)
gTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTTCTCCGACCCCAAAAGTCCCTCGCCGGGCAACCGGGGCTCGTCGGTATTGGTTTTTGGGTGATTTTGCTAGCGCTTGAGTTGGTTGTGCAGGCCGTTACGCCGGTCACCCAGGCAAACGGCG‑TTCAGGGGAt > 2:479781/1‑239 (MQ=255)
gTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGGATTGGTCTTGGGGTTATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCCGGCAAACGGCG‑TTCCGGTgg > 2:439489/1‑237 (MQ=255)
tgtgCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGGGTTGATTTTGCAGGCCGTAAAGCCGATCACCCAGGCAAACGGCG‑TTCAGGGGATCttt > 1:186583/1‑238 (MQ=255)
gggTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTCACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGcccc > 2:359476/1‑235 (MQ=255)
ggTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGGATTGGTCTTGGGCTGGTTTTGCTAGCGCTGGAGGTGATTTTGCAGGCCGTAACGCCGTTCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTc > 1:430630/1‑236 (MQ=255)
aGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTTCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGGGATCTTTGCCTCGCTGACCg > 1:746418/1‑239 (MQ=255)
tGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCg < 1:239964/239‑1 (MQ=255)
gggACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGatat < 1:625448/239‑1 (MQ=255)
cgcTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGCTTTTTTTCCTCGGCCGCAAACAGTCACGCGCCGGGCCACCGGGCCGCGTCGGTTTTGGGCTTGGGCTTGTTTTGCTAGCGCCGGAGTTGTTTGGGCAGGCCGTAAAGCCCACCACCCATGCAAACGGCG‑TTCAGGCGATCTTTGCCTccgcgcacggccggtttctgccg > 2:1090777/1‑217 (MQ=255)
gcTAATGGCGCGTATTCTCACCTGCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTgg < 2:914309/239‑1 (MQ=255)
cgTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGAt > 1:449124/1‑239 (MQ=255)
ttCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCCACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCCAACGCTGGAGGTCATTGTGCAGGCCGTGACGCCGCGCACCCGCAGAAACGGCG‑GTTGGGTGAACTTTTCCCCGCTTACACGCGCTATTCGTGTGGATGCGCTGGTTgga > 2:1006234/1‑238 (MQ=255)
tctcACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGgcg < 1:310065/239‑1 (MQ=255)
tctcACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGgcg < 2:163610/239‑1 (MQ=255)
tcACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGcgcg < 1:1168112/239‑1 (MQ=255)
cTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGt < 1:1348820/239‑1 (MQ=255)
cTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGt < 1:1238990/239‑1 (MQ=255)
cTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGt < 1:896685/239‑1 (MQ=255)
cTTCGACTTAGCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGt < 2:424472/239‑1 (MQ=255)
ttCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑GGTATTTGTCTTGGGCTGATTTTTCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGGTGCGCTGATTGGCGCGGTGtta > 1:1239271/1‑238 (MQ=255)
tgcGATTTATCCTGGCTGTCTCCGTTACTTATTGTTGTCGGCGTTATTTTTTGCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGGCGCTGCGGTATTGGTCTTGGGCTGAATTTGCTAGCGCTGGAGTTGAGTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGtt < 2:751531/237‑1 (MQ=255)
cGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGGTTTTTTTCCTCGGAAGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTTGCGCCGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGGGGTCTTTGCCTCGCTGACCGGCGGTATTCTGCTGGATGCGCTGATTGGCGCGATGTTc > 2:1356244/1‑238 (MQ=255)
cGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCCGGTGATCTTTGCCTCGCTGACCGGCGGTATTCTGCTGGATGCGCTGATTGGCGCGATGTTc > 1:986348/1‑238 (MQ=255)
cGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTc > 1:1033151/1‑238 (MQ=255)
cGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCg < 1:974685/239‑1 (MQ=255)
cGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTAGGCCCCGCTGGGATTGGTCTTGGGCTGATTTTGCGAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGGTCACCCAGGCAAACGGCG‑TTCAGGTGGTCTTTGCCTTGCTGGCCGGCGGTATTCCTCTGGATTCCGTGATTggtccctttttc > 2:890402/1‑228 (MQ=255)
aTCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGCTTTTTTTCCTCGGACGCCAACAGTCACGCGCCGGGCAACCGGGCCGCGTCGGTATTGGTCTTTGGCTGGTTTTGCTTGGGCTGGAGGTGATTGTGCCAGCCGTAACACCGGTTACCCCGGCAAACGGCG‑GTCAGGGGATCTTTTCCTCGCTGACCGGCGATATTCTGCAGGATGCGCTGACTGGCGCGGTGTTTGCCCTTa > 2:606656/1‑239 (MQ=255)
aTCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTa < 2:609819/239‑1 (MQ=255)
tCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGGTTTTTTTCCTCGGACGCAAACAGTCACGCGCCCGGCAACTTGGCCCCGTCGGGATTTGTCTTTGGCTGCTTTTTCTAGCGCTTGGGTTGATTTTGCACGTCGTTACACCGCTCATCCCGGCAAACGGGGCTTCA‑GTGGTCTTTGCCTCGCTGACCGGCGATATTCTGCTCGATGCGCTGCTTTGCGCGACGTTCGCCATTAt > 2:1245248/1‑239 (MQ=255)
tGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGGCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAg < 2:1170475/239‑1 (MQ=255)
tGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAg < 2:1033151/239‑1 (MQ=255)
cTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGGATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGGTGATTGTGCAGGCCGTAACGCCGCTCACCCAGGCAAACGGCG‑TTCAGGGGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCt > 1:701807/1‑238 (MQ=255)
tcacgtttACTTA‑TTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTcc < 2:577918/233‑1 (MQ=255)
tCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCAAGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGATGATTTTGCTAGCGCTGGCGTTGATTGTGGAGGCGCTAAAGCCGATAACCCCGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCCTACCGGCGCACTTTTGCTGGGTCGGCGGATTGGCGCGATGTTTGCCACTATCAGCTACt > 2:1144697/1‑238 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTTGCCATTATCAGCTACTc > 1:1037878/1‑238 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGGGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTc > 1:401544/1‑238 (MQ=255)
ttACTTATTTTTATCGGCGTGATTTTTTTTCTCGGACGCCAACAGTCACGCGCCGGGCAACCGGGCCGCGTCGGGATTGGTCCTGGGCTGGTTTTGCTAGCGCTGGAGGTGATTGTGCCGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGGGATCTTTGCCTCGCCGGCCGGCGGTACTCTGCTGGGTGCGCCGATTGGCGCCGTGTTTGCCCTTTTCATCCACTCCCGCCt > 2:158383/1‑239 (MQ=255)
ttACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCt < 2:1357512/239‑1 (MQ=255)
ttACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGGATTGGTCTTGGGCTGATTTTTCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGGTCACCCAGGCAAACGGCG‑TTCAGGGGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGGTGTTCGCCATTATCAGCTACTCCAGCCt > 1:721679/1‑239 (MQ=255)
ttACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGGATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGGTGATTGTGCAGGCCGTAACGCCGATCCCCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGGTATTCTGCTGGATGCGCTGATTGGCGCGCTGTTCGCCATTATCAGCTACTCCAGCCt > 2:985985/1‑239 (MQ=255)
aCTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTtg < 2:1037878/239‑1 (MQ=255)
cTTATTTTTATCGGCGTGATTTTTTTTCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCCCCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTtgc < 1:841798/239‑1 (MQ=255)
cTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCGCCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTtgc < 1:606656/239‑1 (MQ=255)
cTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTtgc < 1:1114963/239‑1 (MQ=255)
cTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTtgc < 1:779443/239‑1 (MQ=255)
cTTATCTTTATCTGCGTGATTTTTTTCCTCGGAGGCAAACAGTCACGCGCCGGGCGTCTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGTTGTTCGCCATTATCAGCTACTCCAGCCTtgc < 2:411993/239‑1 (MQ=255)
ttATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGGGGTCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCtt > 1:652639/1‑236 (MQ=255)
tATTTTTTTCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGAAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTtgctg < 1:40145/239‑1 (MQ=255)
tATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTtgctg < 1:574051/239‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCCCGTCGGGATTGGTCTTGGGCTGATTTTGCTAGCGCTGGGGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTTGCGCGATGTTCGCCATTATCAGCTACTCCACCCTtgct > 1:869561/1‑237 (MQ=255)
ttttATCGGCGTGATTTTTTTCCTCGGACGCCCACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTTGGCTGATTTTGCTAGCGCTGGAGGTGGTTGTGCAGGCCGTGACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATTTTTGCCTCGCTGACACGCGATATTCTGCTGGATGCGCTGATTTGAGCGATGTTCACCCTTTTCAGATCCTCCACCCTttct > 2:392208/1‑235 (MQ=255)
ttttATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTTCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGGTCACCCAGGCAAACGGCG‑GTCAGGGGATCTTTGCCTCGCTGACCGGCGATATTTTGCTGGATGCGCTGATTTGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTtgct > 1:595183/1‑235 (MQ=255)
tATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTTGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGGGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGt > 1:819197/1‑237 (MQ=255)
gATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACcg < 1:223382/239‑1 (MQ=255)
gATGTTTTTCCTCGGACGCAAAGAGTCACGCGCCGAGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGAcc < 1:563858/238‑1 (MQ=255)
cGCAACGAGTCGCGCGCGGGGCACCTGGGCGGGGGCGGTATTGGTCTTGGACTGATTTTGCTGGCGTTGGGGTTGATTTTCCGGGCCGTACCCCGGACCACCCAGGCAAGCGGCG‑TTCAGGTGATCTTTGCTCCGTGGACCGGCGATATTCTGCTGGATGCGCTGTTGGGCGCGATGTTCGCCTTTATCAGCTCCTCCAGCCTTGCTGCGGTACTGCTGACCGCGACTCTGACcgccgc < 2:898018/239‑1 (MQ=255)
gCAAACGGTCCCGCGCGGGGCAGCGGGGCCGCGGGGGTATTGGTCTTGGGCTGATTTTGCGAGCGCTGGGGTTGATTGTGCAGGCCATAACGCCGATCACCCAGGCAAACGGTG‑TTCAGGTGATCTTTGCCTCGCTGACGGGCGATATTCTGCTGGAGGCGCTGATTGGCGCGATGTCCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCa < 2:701807/239‑1 (MQ=255)
gCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCCCCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCa < 1:397478/239‑1 (MQ=255)
tCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGCCTCTGACCGCCGCAGGCATTa > 2:1129124/1‑238 (MQ=255)
tCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTa > 1:123223/1‑238 (MQ=255)
cgggcCGGGCAACTGGGCCGCGTCGGTTTTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGTTTGTGCAGGCCGTAACGCCGATCCCCCAGGCAAACGGCG‑TTCGGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGTTTTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTAtctc < 1:155632/236‑1 (MQ=255)
gggCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTcc > 1:332199/1‑238 (MQ=255)
ggCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCt < 1:732218/184‑1 (MQ=255)
ggCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTcccc > 2:41317/1‑239 (MQ=255)
aaCTGGGCCGCGTCGGTATGGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGACCCCCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGCCTCTGACCGCCGCAGGCATTATCTCCTTCCCCGt < 1:488717/238‑1 (MQ=255)
gCCGGGTCGGTTTTGGTTTTGGCTTTTTTTGGTTAGCGCGGGGTTTGTTTGTCCGGGCCGTACCGCCGATCACCCAGGCAAACGGGG‑TTCGGGTGATCTTGGCCTCGCGGACCGGCGATATTCTGCTGTATGCGCTGATTGGCGCGTTGTTCGCCATTATCAGCTCCTCCACCCTTGCTCCTGTACTGCTGCCCGCGCCTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGct < 2:819197/238‑1 (MQ=255)
cGGTATTGGTCTTGGGCTGGTTTTGCTAGCGCTGGAGTTGATTGGGCGGGCCGTACCGCCGATCCCCCAGGCAACGGGCT‑TTCAGGTGTTCTTTGCCTCCCTGACCGGCGATTTTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTCCTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCtctgtctg < 2:669665/238‑1 (MQ=255)
gTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGt > 2:482915/1‑239 (MQ=255)
gggCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGGTCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGGGCTa > 1:1297745/1‑238 (MQ=255)
gggCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTa > 1:669433/1‑238 (MQ=255)
gggCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTa > 2:873618/1‑238 (MQ=255)
gggCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTa > 1:1010980/1‑238 (MQ=255)
gggCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACAGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTa > 1:1346499/1‑238 (MQ=255)
gATTTTGCTAGCGCTGGAGTTGCTTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACTGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCg > 1:230380/1‑239 (MQ=255)
aTTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCgg > 1:382029/1‑239 (MQ=255)
aTTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCACCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCgg > 2:1130591/1‑239 (MQ=255)
gCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTcccc > 1:758341/1‑199 (MQ=255)
gCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCg > 2:790789/1‑239 (MQ=255)
ttgtttgtCCGGGCCGAAACCCCGCGCGCCCGGCCAAAGGGCG‑TTGGGGTGATCTTTCCCTCGTTGACCGGCGATTTTCTGCTGGGTGCGCTGATTGGCGCGGTGTTCGCCATTATCAGCTACTCCGGCCTTGCTGCTGTACTGCTGCCCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCaa < 2:101975/238‑1 (MQ=255)
ttGATTGTGCAGGCCGTAACGCCGATCCCCCAGGCAACCGGCT‑TTCAGGTGATTTTTGCCTCGCTGACCGGCGATTTTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTCCTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCaa < 1:439489/238‑1 (MQ=255)
tgtgtgggCAGGCCGAACCGCCGCGCACCCAGGCAAAGGGCG‑TTAAGGGAGCCTTGGCCTCGTTAGCCGGCGTTTTTCGGCGGGATGCGCTGATGGCCGCTATGTCCGCGATTTCCAGCTCCTCAAGCTTGGCTGCTGTCCCGCGGCCCGCGGCTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATg < 2:956226/232‑1 (MQ=255)
ggtgggggcgggCCGAACCGCCGACCCCCCAGGCAAACGGCG‑TTCGGGGGATCTTTGCCTCGCTGACGGGCGATATTCTGCGGGATGGGCTGATTGGCGGGATGTCCGCCATTATCAGCTACCCCGGCCTTGCTGCTGTACTGCGGCCCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATg < 2:186583/229‑1 (MQ=255)
gATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAAt > 1:914966/1‑237 (MQ=255)
aTTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGc > 2:1120968/1‑238 (MQ=255)
tgCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTg > 1:659853/1‑197 (MQ=255)
tgCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGGGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCT‑ACCTCGGTTCCGGTCTGCTGGCAATGCTcaaca > 1:397543/1‑239 (MQ=255)
cAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTcaaca > 1:956226/1‑238 (MQ=255)
aGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCaacaac > 1:363215/1‑239 (MQ=255)
caCGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCGTTCTCTCCTTCCCCGTGGCGCTCTGTCTGGTGCTTGGTGCTAACCTCGGTTCCGTTCTTCTGGCAATGCTCAACAACACTgcc > 2:472724/2‑238 (MQ=255)
aaCGCCGATCGCCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTgcc > 1:685153/1‑238 (MQ=255)
cGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAAt > 2:1125001/1‑239 (MQ=255)
cGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAAt > 1:316056/1‑239 (MQ=255)
cGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAAt > 1:168943/1‑239 (MQ=255)
aTCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGCCCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGGGCTAACCTCGGTTCCGGCCTGCTGGCAATGCTCATCAACACTGCCGCCAATg > 1:208411/1‑238 (MQ=255)
aTCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCACCAACAGTGCCGCCACTg > 2:783357/1‑238 (MQ=255)
aTCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATg > 1:56444/1‑238 (MQ=255)
ggCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATGCCGCAGccc > 1:1056282/1‑239 (MQ=255)
aCGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATGCCGCAGCCCGCCgt > 2:813972/1‑239 (MQ=255)
|
CTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCG‑TTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATGCCGCAGCCCGCCGTGTCGC > NC_000913/4227976‑4228445
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
