Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F17 I0 R1
|
115 |
121.7 |
2441348 |
96.4% |
2353459 |
231.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,739,952 |
G→T |
12.8% |
L14F (TTG→TTT) |
ydhC → |
putative arabinose efflux transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,739,952 | 0 | G | T | 12.8%
| 210.4
/ 2.6
| 93 | L14F (TTG→TTT) | ydhC | putative arabinose efflux transporter |
| Reads supporting (aligned to +/- strand): ref base G (33/47); new base T (11/2); total (44/49) |
| Fisher's exact test for biased strand distribution p-value = 5.56e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 |
GATGCAGCTCCTGTGCCGCAGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGAAAA > NC_000913/1739717‑1740188
|
gATGCAGCTCCTGTGCCGCAGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGc < 1:605811/239‑1 (MQ=255)
aTGCAGCTCCTGTGCCGCAGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTTGTTAATTGAGAGATTTAAAGAATATACATGCAACCTGGGAAAAACTTTTTAGTCTTGCTGGGGGGTTTTAGCg > 1:548780/1‑239 (MQ=255)
gtgCCGCAGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGCGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTTAGAGATTTTAAGAATATACATGCAACCTGGGAAAAGATTTTTAGGTTGGCTGGCGGGTTTTAGGCTACTCCGtttt > 2:1016555/1‑239 (MQ=255)
gtgCCGCAGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGtttt < 1:878924/239‑1 (MQ=255)
gCAGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGc < 1:10276/239‑1 (MQ=255)
aGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTACTTTCACTCCCTACACTTTGCGGCGGAGTTTAATTGAAAGATTTAGAGAATATCAATACAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGGTTGGGCGTAGCCGGGTTTCTGGCac > 2:465280/1‑238 (MQ=255)
aGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCa < 2:432044/238‑1 (MQ=255)
ttaaacactagcatgtagcgcTACCGCCACAACATCTACGAGTGAATATTCTGAACGCATAGTGTGCCTGAAAAATTTTTGAAGCCAGTCATCAAATATTACCGTTTCACAACAGTATTTTCACTCCTTACACTACGCGGCGGTGTTTAATTGAGAGAGTTAGAGAATATGCATGCAACCTGGGAAAAGATTTTGAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTTGCAAc < 2:782419/220‑1 (MQ=255)
gcTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAAc < 2:582379/237‑1 (MQ=255)
gcTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACGTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAAc < 1:314864/237‑1 (MQ=255)
gcTAAAACGACCATTACGGGCTACCGCAACAACAATTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTGCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAAc < 2:42564/237‑1 (MQ=255)
tAAACCTACCAGTACGCGCCACCGCATCAACAACTTCGAGTGAATAGTCTAACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTGTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTGTTCTGGCAACC‑Gat < 2:133953/239‑1 (MQ=255)
aCCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTTATTCAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGGTTTTGCGTACTCGGTTTTTTGGCAACC‑GATATGTa > 1:824902/1‑237 (MQ=255)
cgcgCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTCGTGAATATACATGCAACCTGGGCAAAGATTTTTAGTCTGGCTGGCGGGTTTGTGCGTACTCCGTTTTTTTGCAACC‑GATGTGGTTctgcct > 1:383364/1‑237 (MQ=255)
gcgacgacaaaaacaacTTCGAGTGAGTAGTCTACCCAGATAGTCTGCCTGAAAAATTTTTGACACCAGTCATCAAATTTGACCTTTTCACAACACTATTGTCACGCCCTACACTGGGCGGCGGTTTTTAATTGAGAGATTTAGATAATATACATGCAACCTGGGAAAAGATTTTCAGTTTGGCTCGCGGGTTTGTGGGTACTCGGTTTTCTGGCAACC‑GATAGGTTTCTGCCTGtttt < 2:8998/228‑1 (MQ=255)
gcTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCttt < 1:99282/239‑1 (MQ=255)
gcTACCGCATAAACATCTTCGAGCGAATATTCTGACCACATAGTCTGCATGCAAAATTTTTGAAACCAGTCATCAAATATTTCTGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTTTGGCTGGCGGGTTTGAGCGTCCTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCttt < 2:1194179/239‑1 (MQ=255)
aacTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAgg < 1:266494/239‑1 (MQ=255)
ttCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGAATTTGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTTTGGCAACC‑CATATATATCTGCCTTGTTTT‑GCCG‑CCATACAGGGCg > 1:713514/1‑239 (MQ=255)
tGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGGACTCGGGTTTTTTGCCACC‑GGTATTGATCTGCCTGCTTTT‑gccc‑cccttccagccggccct > 2:67636/1‑223 (MQ=255)
tGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTTAGCCTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑TCCG‑CCATACAGGGCGAccctccaaagcct > 1:574702/1‑227 (MQ=255)
gACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTATTTGAGAGATTTAGAGAATATACATCCAACCTGGGAAAAGATTTTTAGTTTGGCTGGCGGGTTTTTGGGGAACCCGTTTTCTGGCCACC‑CATATTTTTCTGCCTGCTTTC‑GCCG‑CCCTTCAGGGCCGCCTGCaatcccccgc > 2:656279/1‑231 (MQ=255)
aCCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGGTTTTTGGCAAAC‑GATATGTATCTGCCTGCTTTT‑GCCG‑CCCTACAGGCCGACCTTCAAACGCCTgtg > 1:271315/1‑237 (MQ=255)
ccACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTTATTGAGAGATTTTAATAATATACATGCAACTTGGGCTAAGATTTTTTGTATGGATTGCGGGGTTTAGCGGACACTGTTTTTTGGCAACC‑GCTAAGTCTCTGCCTGACTTC‑GCCC‑CCATATTGGATGACCTTCAAACCTCTGct > 2:677532/1‑237 (MQ=255)
ccACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGGTTTTGCGGACTCGGGTTTCTGGCAACC‑GATATTTATTTGCCTGCTTTC‑GTCG‑CCATACAGGCCGGCCCGCCAACGCCTGCg > 2:832824/1‑238 (MQ=255)
ccACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGGTTAATTGAGAGAATTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTTGCGGGGTTGAGCGTACTCGGGTTTCTGGCAACA‑GCTATGTATCTGTCTGCTTTT‑GCCG‑CCATTCTGGCCGACCCGcctactcagccg > 2:515520/1‑227 (MQ=255)
ttgcatgcaAAATTTTTGAAACCAGTCATCAAATATTCCCGTTCCACAACACTAATTTCACTCCCTACACTTGGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGt < 2:824902/236‑1 (MQ=255)
cggccggcAAAATTTTTGAACCCAGTCATCTAATATTACCGTTTCACAACACTAATTTCACTACCTACACTTTGCGGCGGGGTTTAATTGAGATATTTAGAGAATATACAGGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGTGGGTTTGAGCGTACGCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑TCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGt < 2:891155/235‑1 (MQ=255)
gcctgcAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGGTTGGGCGTACTCGGGTTTCTGGCAACC‑GATATGTATCTTCCTGCTTTT‑GCCG‑CCATTCAGGCCGACCTGCAAACGCCTGCGGCTGCTGTCAgg > 1:887907/1‑238 (MQ=255)
gcctgcAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGAATTAGAGAATATACATGCAACCTGGGGAAAGATTTTTAGTCTGGCTGGCGGGTTTTAGGGGACTCCGGTTTTTGGCAACC‑GATATGGATCTGCCTTCTTTT‑CGCG‑CCCTCACTGCCGACCTGCCAACCCCCGCCTCCGCTTTCCGt > 2:1145795/1‑239 (MQ=255)
gcctgcAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGGTTTATTGAGAGGTTTAGAGAATATAAATGCAACCTGGGAAAAGAATTTTAGGTTGGCTGGCGGGCTTGAGAGGAACCGGGTTTCTGGCAAAC‑GATATGTAACTGGCTGGTTTCGGCCG‑CC‑TACCGGGCGACCTGGCAACGCCTACGGcttgtggttgg > 2:245089/1‑230 (MQ=255)
cctgcAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGGTTTCTGGGCACC‑GATATGTATCTGGCTGCTTTC‑TCCC‑CCCTACAAGCCCACCTGCAAACCCCTGCGTCTGCTGTCAGt > 1:648521/1‑238 (MQ=255)
cctgcAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGCGTTTAATTGGGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTAATCGGGTTTCTTGCCACCGGATAGGT‑TCTGCCGTCTTTT‑GCCGCCCTTACA‑GCCGCCCTGCCAACGccagggacgtgcgtctgtg > 2:926306/1‑222 (MQ=255)
tgcAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTTAGGGGACCCGGTTTTTTTGCAACC‑GATATGGATTTGCCTGCTTTC‑GCCC‑CCCTACACGCCGACCCGCCAACGCCCGCGGCTGGTGTCAGTGc > 2:836377/1‑238 (MQ=255)
aaaTTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGcc < 1:161450/239‑1 (MQ=255)
tttttGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTa < 1:67636/239‑1 (MQ=255)
catcaAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGGGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGcc < 2:448131/239‑1 (MQ=255)
ttACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGcc > 1:507256/1‑239 (MQ=255)
tACCGTTTCACAACACTAATTTCACTCCCTTCACTTTGCGGCGGTGTTTAATTGAGAGATGTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCg < 1:156175/239‑1 (MQ=255)
tACCGTTTCAAAACACTATGTTCACTCCCTTCACTTTGCGGCGGTGTTTAATTGAGAGTTTTAGGGGATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCACCC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCg < 2:568114/239‑1 (MQ=255)
ttCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑Gccc < 1:832824/239‑1 (MQ=255)
ttCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATAAATGCAACCTGGGGAACGATTTTTAGTCTGGCTGGCGGGTTTTAGCGTACTCGGGTTTCTGGCAACC‑GCTATGTATCTGCCTGCTTTT‑GGCG‑CCAAAAAGACCGCCCCGCAAACGCCTGCGTCCTCTTTCGGTGCCCGACTTAGTCCTTTTCCTTCCCGttttgtccccgtc > 2:389890/1‑229 (MQ=255)
aaactCTAATTTCACTCCCTACACTTGGCGGCGGTGTTTAATGGAGAGATTTAGAGAATATTCATGCAACCTGGGAAAAGATTTTTAGGCTGGCTGGCGGGTTTGGGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTGGCCGCA‑GCCCAGCt < 2:832456/238‑1 (MQ=255)
aacaCTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATGTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTTGCTGGCGGGTTTGAGCGTACTCGGTTTGCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCtt < 2:163555/239‑1 (MQ=255)
cacTAATTTCCCTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCttt < 1:517259/146‑1 (MQ=255)
cacTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGt < 1:447053/188‑1 (MQ=255)
aCTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGGAAAGATTTTTAGTCTGGCTGGGGGGGTTGAGGGTAACCGGGTTTTTGGCAACC‑GGTATGTATCTGCCGTGTTTC‑GGCG‑CCCTa > 2:517259/1‑146 (MQ=255)
cTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTT‑GCCG‑CCATACAGGCCGACCTGCCAACGCCCGCGTCTTCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGctcc > 1:946273/1‑237 (MQ=255)
gcggcgGTGTTTAATTGAGGGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTa > 1:982802/1‑239 (MQ=255)
gcggcgGTGTTTAATTGAGAGATTTAGAGAATATACATGCCACCTTGGAAAAGATTTTTAGGTTGGCTGGCGGGGTTGAGGGTAAACAGGTGTTTGGGAAAC‑GATATGGCTCCGACTGCTTTT‑GCCG‑CCATACAGGCCGCCCTTCAAAAGCCTTCGTCTCCTGTCAGCTCCCCGCTTTGT‑CCTTTTCTTGCCGGTTTTTCCCCACGCCCATCTTCTCTGGGGGCCGCTC‑CCGCCCGttg > 2:1136075/1‑238 (MQ=255)
ttAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACGCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTaa < 2:1173127/238‑1 (MQ=255)
ttGGGAGATTTATAGAATATCACTGCAACCTTGGAAAAGAGTTTGAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTAC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCgg < 2:713514/239‑1 (MQ=255)
ttGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCgg < 1:836377/239‑1 (MQ=255)
agagtTTTAGAGAATATACATGAAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTCCCCGGGTTTCTGGCCACC‑GATATGTATTTGGCTGCTTTC‑GTCC‑CCATACATGTCCACCATCAAACCCCTGCGTCTCCTGTCAGTGCCAGCCCTAGT‑CTGTTCCATGACGGTTTTGCGGCC‑GCCCAGCGTCTGGGGGTGCCTCTCTCCGACCGGTCTTGTCCGTAACCGGttt > 2:1119493/1‑237 (MQ=255)
agagaTTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTACACCGGtat > 1:554101/1‑239 (MQ=255)
agagaTTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCCTACTCGGTTTTCTCGCAACC‑GATATGGTTCTGCCTGCTTTC‑GCCT‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGC‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCAAGCTTCTGTGTGGGCCGCTCTCGCGCCGATATGGTCGGAAACCGGtat > 2:1106264/1‑239 (MQ=255)
gagaTTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGtat < 1:1145795/238‑1 (MQ=255)
aTTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGACGGTTTTGCCGCC‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGGCCGTTATGGTCGTAAACCGGCattttt > 2:254877/1‑239 (MQ=255)
tAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAAt < 1:951126/239‑1 (MQ=255)
tataCATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTTAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTTCTTTC‑GCCG‑CCATACAGGCCGCCCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCCGCCTCTGTGGGGGCCTCTCTCCGACCGTTATGGTCGGAAAACGGTATTATTAATCGGCCTg > 2:1065685/1‑239 (MQ=255)
tataCATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGTTCTCCGACCGGTATGGTCGGTAAACGGTGTTATTAAACGGCCTg > 1:1215404/1‑239 (MQ=255)
tataCATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCt > 2:237160/1‑238 (MQ=255)
tataCATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTg > 1:832949/1‑239 (MQ=255)
tataCATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCCCTCCGACCGTTATGGTCGTAAACCGGGATTATTAATCGGCCTg > 1:73851/1‑239 (MQ=255)
tataCATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACA‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAACCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCC‑GCCCAGCTCCTGGGGGGGCCGCTCTCCGACCGTTATGTTCGCAAACCgcatttcttaatggg > 2:417141/1‑221 (MQ=255)
aTGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAAt > 1:252013/1‑239 (MQ=255)
gCACCCTGGGGAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAAttt < 1:1019680/239‑1 (MQ=255)
gCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAAttt < 1:842845/239‑1 (MQ=255)
aCCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGGA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGCTCGTAAAACGGTAGTATGTATCGGCCTGACCAttttt > 1:451766/1‑238 (MQ=255)
aCCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTg > 2:528490/1‑239 (MQ=255)
cTGGGAAAGGATTTTTAGTCTGGCTTGCGGGTTTGATCGGACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCg < 2:271315/239‑1 (MQ=255)
cTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCg < 1:1119493/239‑1 (MQ=255)
ggAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GTTATTTATCTGCCTGCTTTC‑GCCG‑CCATACATGCCGACCTGCAAACCCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGGTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTCAACCGGTATTATTAATCGGCCTGACACTTTTTGCgctc > 1:1202306/1‑236 (MQ=255)
ggAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGGCCATTTTTGCGTTa > 1:626680/1‑239 (MQ=255)
ggAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTa > 1:242238/1‑239 (MQ=255)
aaagGATGTTTAGTCTGTCTGGCGGGTTTGAGAGTGCTCGGTCTCCGGGCACCC‑GATATGTGTCTGCCTGATTTC‑GCCG‑CCATACAGGCCGTCCTGCAATCGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCGTCTGTGGGGGCCGCTCTCCGTCCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAgg < 2:1103871/239‑1 (MQ=255)
aaaGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAgg < 1:205196/238‑1 (MQ=255)
aaaGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAgg < 1:656279/238‑1 (MQ=255)
gATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATTTATCTGCCTGCTTTC‑GCCG‑CCATTCAGGCCGACCTGCCAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTCAACCGGGATTATTAATCGGCCTGTCAATTTTTGCGTTCGGTCGt > 2:747814/1‑239 (MQ=255)
aTTGTTAGTCTGGCTGGCGGGTTTGAGCGTACCCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGGCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGtatt < 1:866449/204‑1 (MQ=255)
tttttAGTCTGGCTGGCGGGTTTTAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTc < 1:1003734/238‑1 (MQ=255)
tttttAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTTCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTc < 1:465280/238‑1 (MQ=255)
tttttAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTc < 1:237160/238‑1 (MQ=255)
tggctggcGGGTTTGAGCGTTCTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCt < 2:1136829/239‑1 (MQ=255)
tggcgggcGGGTTTGTGCGTACCCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCt < 2:626680/239‑1 (MQ=255)
gctggcGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGtat < 1:948697/191‑1 (MQ=255)
gctggcGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTATGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGtat > 2:948697/1‑191 (MQ=255)
ctggcGGTTTGGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCtgt < 2:648521/238‑1 (MQ=255)
atgccGGGTTTGAGCTTCCCCGGTTTTCTGGCAACC‑GCGATGTATCTGCCTGTTTTC‑GCCG‑CCATACAGGCCGACCTGCAACCGCCTGCGTCTGCTGCCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCACCTTCTGTGGGGGCCGCTCTCCGACTGTTCTGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCtgt < 2:887907/234‑1 (MQ=255)
cGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACACTTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTa > 2:290403/1‑239 (MQ=255)
gggTGTTAGCGTACTCGGTTTTCTGGCAACC‑GATATGTCTCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGGGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGTCCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTa < 2:972893/238‑1 (MQ=255)
ttGAGCGTCCCCGGTTGTGGGCCAACC‑GATACGTATCTCGCTGCTGTC‑GCGG‑CCTGACGGGCCGGCCGGCCACCGCCTGCGGCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTGTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGaaaa < 2:1104398/239‑1 (MQ=255)
ttGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGaaaa < 1:450709/239‑1 (MQ=255)
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GATGCAGCTCCTGTGCCGCAGCGCTAAAACTACCATTACGCGCTACCGCATCAACAACTTCGAGTGAATATTCTGACCACATAGTCTGCCTGCAAAATTTTTGAAACCAGTCATCAAATATTACCGTTTCACAACACTAATTTCACTCCCTACACTTTGCGGCGGTGTTTAATTGAGAGATTTAGAGAATATACATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACC‑GATATGTATCTGCCTGCTTTC‑GCCG‑CCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGT‑CTGTTCCTTGCCGGTTTTGCCGCA‑GCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGAAAA > NC_000913/1739717‑1740188
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
